ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:953:952

Extra

PDB:
ATOM 1 O3' G A 52 71.911 2.178 108.850 1.00 87.32 O
ATOM 2 P A A 53 70.446 2.511 109.425 1.00 87.68 P
ATOM 3 OP1 A A 53 70.340 1.912 110.781 1.00 88.52 O
ATOM 4 OP2 A A 53 69.437 2.163 108.385 1.00 86.37 O
ATOM 5 O5' A A 53 70.460 4.093 109.608 1.00 87.60 O
ATOM 6 C5' A A 53 71.358 4.723 110.545 1.00 84.55 C
ATOM 7 C4' A A 53 71.113 6.215 110.580 1.00 83.18 C
ATOM 8 O4' A A 53 71.446 6.800 109.292 1.00 82.73 O
ATOM 9 C3' A A 53 69.676 6.647 110.809 1.00 81.98 C
ATOM 10 O3' A A 53 69.333 6.592 112.190 1.00 82.45 O
ATOM 11 C2' A A 53 69.684 8.064 110.249 1.00 81.44 C
ATOM 12 O2' A A 53 70.322 8.987 111.109 1.00 81.52 O
ATOM 13 C1' A A 53 70.575 7.887 109.021 1.00 80.71 C
ATOM 14 N9 A A 53 69.831 7.595 107.794 1.00 80.00 N
ATOM 15 C8 A A 53 69.647 6.378 107.178 1.00 79.59 C
ATOM 16 N7 A A 53 68.946 6.445 106.070 1.00 79.54 N
ATOM 17 C5 A A 53 68.642 7.795 105.948 1.00 79.12 C
ATOM 18 C6 A A 53 67.922 8.522 104.978 1.00 78.29 C
ATOM 19 N6 A A 53 67.358 7.970 103.899 1.00 76.60 N
ATOM 20 N1 A A 53 67.801 9.856 105.157 1.00 77.70 N
ATOM 21 C2 A A 53 68.367 10.413 106.238 1.00 77.65 C
ATOM 22 N3 A A 53 69.068 9.840 107.214 1.00 78.77 N
ATOM 23 C4 A A 53 69.173 8.514 107.008 1.00 79.52 C
ATOM 24 P U A 54 67.786 6.517 112.627 1.00 82.14 P
ATOM 25 OP1 U A 54 67.779 6.237 114.083 1.00 81.36 O
ATOM 26 OP2 U A 54 67.052 5.618 111.692 1.00 82.04 O
ATOM 27 O5' U A 54 67.256 8.004 112.417 1.00 83.24 O
TER

ATOM 1 O3' A B 51 72.975 -1.240 103.841 1.00 89.01 O
ATOM 2 P G B 52 71.555 -0.769 104.436 1.00 90.20 P
ATOM 3 OP1 G B 52 71.058 -1.868 105.305 1.00 90.35 O
ATOM 4 OP2 G B 52 70.710 -0.289 103.309 1.00 89.50 O
ATOM 5 O5' G B 52 71.923 0.468 105.375 1.00 88.93 O
ATOM 6 C5' G B 52 72.921 0.329 106.403 1.00 87.85 C
ATOM 7 C4' G B 52 73.340 1.681 106.932 1.00 87.93 C
ATOM 8 O4' G B 52 73.878 2.492 105.853 1.00 88.50 O
ATOM 9 C3' G B 52 72.249 2.558 107.521 1.00 87.53 C
ATOM 10 O3' G B 52 71.911 2.178 108.850 1.00 87.32 O
ATOM 11 C2' G B 52 72.900 3.934 107.464 1.00 87.79 C
ATOM 12 O2' G B 52 73.861 4.132 108.480 1.00 87.44 O
ATOM 13 C1' G B 52 73.616 3.867 106.114 1.00 88.35 C
ATOM 14 N9 G B 52 72.791 4.413 105.035 1.00 88.60 N
ATOM 15 C8 G B 52 72.170 3.723 104.017 1.00 88.43 C
ATOM 16 N7 G B 52 71.472 4.493 103.226 1.00 88.01 N
ATOM 17 C5 G B 52 71.645 5.769 103.747 1.00 88.59 C
ATOM 18 C6 G B 52 71.123 7.020 103.315 1.00 88.25 C
ATOM 19 O6 G B 52 70.376 7.255 102.355 1.00 88.16 O
ATOM 20 N1 G B 52 71.554 8.063 104.131 1.00 86.82 N
ATOM 21 C2 G B 52 72.380 7.925 105.220 1.00 86.79 C
ATOM 22 N2 G B 52 72.680 9.049 105.880 1.00 85.52 N
ATOM 23 N3 G B 52 72.873 6.769 105.633 1.00 87.76 N
ATOM 24 C4 G B 52 72.466 5.739 104.856 1.00 88.52 C
ATOM 25 P A B 53 70.446 2.511 109.425 1.00 87.68 P
ATOM 26 OP1 A B 53 70.340 1.912 110.781 1.00 88.52 O
ATOM 27 OP2 A B 53 69.437 2.163 108.385 1.00 86.37 O
ATOM 28 O5' A B 53 70.460 4.093 109.608 1.00 87.60 O
TER

Atoms:
OP1: (70.340,1.912,110.781)
OP2: (69.437,2.163,108.385)
C3': (69.676,6.647,110.809)
C1': (70.575,7.887,109.021)
C5': (71.358,4.723,110.545)
O4': (71.446,6.800,109.292)
C8: (69.647,6.378,107.178)
O2': (70.322,8.987,111.109)
C6: (67.922,8.522,104.978)
C5: (68.642,7.795,105.948)
C4: (69.173,8.514,107.008)
P: (70.446,2.511,109.425)
C4': (71.113,6.215,110.580)
C2': (69.684,8.064,110.249)
C2: (68.367,10.413,106.238)
N1: (67.801,9.856,105.157)
N3: (69.068,9.840,107.214)
N6: (67.358,7.970,103.899)
N7: (68.946,6.445,106.070)
N9: (69.831,7.595,107.794)
O5': (70.460,4.093,109.608)
O3': (69.333,6.592,112.190)
OP1: (71.058,-1.868,105.305)
OP2: (70.710,-0.289,103.309)
C3': (72.249,2.558,107.521)
C1': (73.616,3.867,106.114)
C5': (72.921,0.329,106.403)
O6: (70.376,7.255,102.355)
O4': (73.878,2.492,105.853)
C8: (72.170,3.723,104.017)
C2: (72.380,7.925,105.220)
C6: (71.123,7.020,103.315)
C5: (71.645,5.769,103.747)
C4: (72.466,5.739,104.856)
P: (71.555,-0.769,104.436)
C4': (73.340,1.681,106.932)
C2': (72.900,3.934,107.464)
O2': (73.861,4.132,108.480)
N1: (71.554,8.063,104.131)
N2: (72.680,9.049,105.880)
N3: (72.873,6.769,105.633)
N7: (71.472,4.493,103.226)
N9: (72.791,4.413,105.035)
O5': (71.923,0.468,105.375)
O3': (71.911,2.178,108.850)
Image (generated by PyMOL):
PyMOL image
show in jmol