ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A726:A725

Extra

PDB:
ATOM 1 O3' G A 725 -38.274 13.329 2.006 1.00 34.99 O
ATOM 2 P A A 726 -38.004 11.945 1.243 1.00 29.74 P
ATOM 3 OP1 A A 726 -37.367 11.036 2.230 1.00 43.58 O
ATOM 4 OP2 A A 726 -37.313 12.219 -0.038 1.00 43.55 O
ATOM 5 O5' A A 726 -39.479 11.431 0.941 1.00 38.86 O
ATOM 6 C5' A A 726 -40.442 11.368 2.000 1.00 38.86 C
ATOM 7 C4' A A 726 -41.834 11.555 1.462 1.00 38.86 C
ATOM 8 O4' A A 726 -41.898 12.808 0.742 1.00 38.86 O
ATOM 9 C3' A A 726 -42.335 10.520 0.466 1.00 38.86 C
ATOM 10 O3' A A 726 -42.886 9.396 1.132 1.00 38.86 O
ATOM 11 C2' A A 726 -43.417 11.286 -0.278 1.00 38.86 C
ATOM 12 O2' A A 726 -44.629 11.322 0.448 1.00 38.86 O
ATOM 13 C1' A A 726 -42.828 12.696 -0.321 1.00 38.86 C
ATOM 14 N9 A A 726 -42.127 12.957 -1.576 1.00 41.30 N
ATOM 15 C8 A A 726 -40.774 13.063 -1.790 1.00 41.28 C
ATOM 16 N7 A A 726 -40.453 13.264 -3.045 1.00 41.38 N
ATOM 17 C5 A A 726 -41.675 13.299 -3.701 1.00 41.37 C
ATOM 18 C6 A A 726 -42.017 13.472 -5.053 1.00 41.21 C
ATOM 19 N6 A A 726 -41.123 13.641 -6.026 1.00 41.18 N
ATOM 20 N1 A A 726 -43.325 13.463 -5.374 1.00 41.13 N
ATOM 21 C2 A A 726 -44.224 13.287 -4.395 1.00 41.20 C
ATOM 22 N3 A A 726 -44.028 13.109 -3.091 1.00 41.30 N
ATOM 23 C4 A A 726 -42.715 13.125 -2.807 1.00 41.38 C
ATOM 24 P C A 727 -42.227 7.955 0.922 1.00 65.94 P
ATOM 25 OP1 C A 727 -43.146 6.974 1.541 1.00 66.49 O
ATOM 26 OP2 C A 727 -40.808 8.020 1.366 1.00 66.42 O
ATOM 27 O5' C A 727 -42.284 7.746 -0.650 1.00 56.36 O
TER

ATOM 1 O3' A B 724 -34.276 18.756 1.424 1.00 20.40 O
ATOM 2 P G B 725 -34.230 17.171 1.200 1.00 41.21 P
ATOM 3 OP1 G B 725 -33.207 16.633 2.141 1.00 75.56 O
ATOM 4 OP2 G B 725 -34.108 16.896 -0.251 1.00 75.49 O
ATOM 5 O5' G B 725 -35.667 16.724 1.716 1.00 34.99 O
ATOM 6 C5' G B 725 -36.466 15.774 1.004 1.00 34.99 C
ATOM 7 C4' G B 725 -37.829 15.682 1.644 1.00 34.99 C
ATOM 8 O4' G B 725 -38.643 16.807 1.221 1.00 34.99 O
ATOM 9 C3' G B 725 -38.650 14.469 1.253 1.00 34.99 C
ATOM 10 O3' G B 725 -38.274 13.329 2.006 1.00 34.99 O
ATOM 11 C2' G B 725 -40.078 14.928 1.507 1.00 34.99 C
ATOM 12 O2' G B 725 -40.491 14.816 2.853 1.00 34.99 O
ATOM 13 C1' G B 725 -39.997 16.401 1.107 1.00 34.99 C
ATOM 14 N9 G B 725 -40.417 16.557 -0.279 1.00 42.60 N
ATOM 15 C8 G B 725 -39.624 16.809 -1.370 1.00 42.66 C
ATOM 16 N7 G B 725 -40.287 16.814 -2.493 1.00 42.79 N
ATOM 17 C5 G B 725 -41.599 16.563 -2.116 1.00 42.78 C
ATOM 18 C6 G B 725 -42.767 16.432 -2.901 1.00 42.65 C
ATOM 19 O6 G B 725 -42.879 16.497 -4.128 1.00 42.55 O
ATOM 20 N1 G B 725 -43.886 16.197 -2.116 1.00 42.58 N
ATOM 21 C2 G B 725 -43.879 16.096 -0.751 1.00 42.63 C
ATOM 22 N2 G B 725 -45.066 15.892 -0.174 1.00 42.60 N
ATOM 23 N3 G B 725 -42.794 16.195 -0.007 1.00 42.67 N
ATOM 24 C4 G B 725 -41.697 16.429 -0.751 1.00 42.76 C
ATOM 25 P A B 726 -38.004 11.945 1.243 1.00 29.74 P
ATOM 26 OP1 A B 726 -37.367 11.036 2.230 1.00 43.58 O
ATOM 27 OP2 A B 726 -37.313 12.219 -0.038 1.00 43.55 O
ATOM 28 O5' A B 726 -39.479 11.431 0.941 1.00 38.86 O
TER

Atoms:
OP1: (-37.367,11.036,2.230)
OP2: (-37.313,12.219,-0.038)
C3': (-42.335,10.520,0.466)
C1': (-42.828,12.696,-0.321)
C5': (-40.442,11.368,2.000)
O4': (-41.898,12.808,0.742)
C8: (-40.774,13.063,-1.790)
O2': (-44.629,11.322,0.448)
C6: (-42.017,13.472,-5.053)
C5: (-41.675,13.299,-3.701)
C4: (-42.715,13.125,-2.807)
P: (-38.004,11.945,1.243)
C4': (-41.834,11.555,1.462)
C2': (-43.417,11.286,-0.278)
C2: (-44.224,13.287,-4.395)
N1: (-43.325,13.463,-5.374)
N3: (-44.028,13.109,-3.091)
N6: (-41.123,13.641,-6.026)
N7: (-40.453,13.264,-3.045)
N9: (-42.127,12.957,-1.576)
O5': (-39.479,11.431,0.941)
O3': (-42.886,9.396,1.132)
OP1: (-33.207,16.633,2.141)
OP2: (-34.108,16.896,-0.251)
C3': (-38.650,14.469,1.253)
C1': (-39.997,16.401,1.107)
C5': (-36.466,15.774,1.004)
O6: (-42.879,16.497,-4.128)
O4': (-38.643,16.807,1.221)
C8: (-39.624,16.809,-1.370)
C2: (-43.879,16.096,-0.751)
C6: (-42.767,16.432,-2.901)
C5: (-41.599,16.563,-2.116)
C4: (-41.697,16.429,-0.751)
P: (-34.230,17.171,1.200)
C4': (-37.829,15.682,1.644)
C2': (-40.078,14.928,1.507)
O2': (-40.491,14.816,2.853)
N1: (-43.886,16.197,-2.116)
N2: (-45.066,15.892,-0.174)
N3: (-42.794,16.195,-0.007)
N7: (-40.287,16.814,-2.493)
N9: (-40.417,16.557,-0.279)
O5': (-35.667,16.724,1.716)
O3': (-38.274,13.329,2.006)
Image (generated by PyMOL):
PyMOL image
show in jmol