Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A659:A658
Extra
PDB:
ATOM 1 O3' G A 658 31.743 109.266 18.145 1.00 55.89 O
ATOM 2 P A A 659 31.518 110.863 18.137 1.00 56.56 P
ATOM 3 OP1 A A 659 30.485 111.188 17.124 1.00 57.23 O
ATOM 4 OP2 A A 659 32.850 111.554 18.073 1.00 58.96 O
ATOM 5 O5' A A 659 30.820 111.152 19.536 1.00 56.61 O
ATOM 6 C5' A A 659 29.535 110.576 19.825 1.00 56.63 C
ATOM 7 C4' A A 659 29.194 110.740 21.284 1.00 57.07 C
ATOM 8 O4' A A 659 30.055 109.926 22.116 1.00 57.71 O
ATOM 9 C3' A A 659 29.337 112.158 21.794 1.00 56.08 C
ATOM 10 O3' A A 659 28.104 112.796 21.551 1.00 55.45 O
ATOM 11 C2' A A 659 29.578 111.952 23.280 1.00 57.72 C
ATOM 12 O2' A A 659 28.368 111.764 23.984 1.00 58.21 O
ATOM 13 C1' A A 659 30.396 110.648 23.281 1.00 59.00 C
ATOM 14 N9 A A 659 31.846 110.852 23.258 1.00 60.74 N
ATOM 15 C8 A A 659 32.673 110.903 22.162 1.00 61.34 C
ATOM 16 N7 A A 659 33.924 111.148 22.454 1.00 61.78 N
ATOM 17 C5 A A 659 33.928 111.252 23.837 1.00 61.81 C
ATOM 18 C6 A A 659 34.953 111.510 24.760 1.00 61.79 C
ATOM 19 N6 A A 659 36.219 111.742 24.409 1.00 61.84 N
ATOM 20 N1 A A 659 34.627 111.532 26.073 1.00 61.84 N
ATOM 21 C2 A A 659 33.351 111.321 26.420 1.00 61.98 C
ATOM 22 N3 A A 659 32.297 111.080 25.643 1.00 62.14 N
ATOM 23 C4 A A 659 32.658 111.057 24.346 1.00 61.50 C
ATOM 24 P G A 660 27.984 114.379 21.662 1.00 55.93 P
ATOM 25 OP1 G A 660 26.918 114.794 20.711 1.00 56.29 O
ATOM 26 OP2 G A 660 29.345 114.949 21.531 1.00 55.47 O
ATOM 27 O5' G A 660 27.443 114.605 23.141 1.00 55.12 O
TER
ATOM 1 O3' G B 657 37.502 107.334 17.434 1.00 56.96 O
ATOM 2 P G B 658 36.823 108.770 17.678 1.00 58.63 P
ATOM 3 OP1 G B 658 36.626 109.382 16.342 1.00 59.32 O
ATOM 4 OP2 G B 658 37.602 109.496 18.709 1.00 59.71 O
ATOM 5 O5' G B 658 35.401 108.445 18.310 1.00 57.19 O
ATOM 6 C5' G B 658 34.438 107.659 17.608 1.00 56.00 C
ATOM 7 C4' G B 658 33.242 107.418 18.485 1.00 56.06 C
ATOM 8 O4' G B 658 33.627 106.604 19.618 1.00 57.09 O
ATOM 9 C3' G B 658 32.625 108.659 19.099 1.00 56.00 C
ATOM 10 O3' G B 658 31.743 109.266 18.145 1.00 55.89 O
ATOM 11 C2' G B 658 31.885 108.061 20.292 1.00 56.92 C
ATOM 12 O2' G B 658 30.714 107.398 19.876 1.00 57.44 O
ATOM 13 C1' G B 658 32.845 106.954 20.743 1.00 58.34 C
ATOM 14 N9 G B 658 33.739 107.324 21.837 1.00 61.79 N
ATOM 15 C8 G B 658 35.085 107.585 21.744 1.00 62.76 C
ATOM 16 N7 G B 658 35.617 107.961 22.876 1.00 63.45 N
ATOM 17 C5 G B 658 34.564 107.933 23.780 1.00 64.49 C
ATOM 18 C6 G B 658 34.532 108.260 25.155 1.00 65.14 C
ATOM 19 O6 G B 658 35.453 108.684 25.865 1.00 67.38 O
ATOM 20 N1 G B 658 33.266 108.067 25.702 1.00 65.17 N
ATOM 21 C2 G B 658 32.167 107.630 25.010 1.00 65.20 C
ATOM 22 N2 G B 658 31.045 107.489 25.710 1.00 64.53 N
ATOM 23 N3 G B 658 32.175 107.344 23.713 1.00 65.66 N
ATOM 24 C4 G B 658 33.401 107.517 23.165 1.00 63.97 C
ATOM 25 P A B 659 31.518 110.863 18.137 1.00 56.56 P
ATOM 26 OP1 A B 659 30.485 111.188 17.124 1.00 57.23 O
ATOM 27 OP2 A B 659 32.850 111.554 18.073 1.00 58.96 O
ATOM 28 O5' A B 659 30.820 111.152 19.536 1.00 56.61 O
TER
ATOM 2 P A A 659 31.518 110.863 18.137 1.00 56.56 P
ATOM 3 OP1 A A 659 30.485 111.188 17.124 1.00 57.23 O
ATOM 4 OP2 A A 659 32.850 111.554 18.073 1.00 58.96 O
ATOM 5 O5' A A 659 30.820 111.152 19.536 1.00 56.61 O
ATOM 6 C5' A A 659 29.535 110.576 19.825 1.00 56.63 C
ATOM 7 C4' A A 659 29.194 110.740 21.284 1.00 57.07 C
ATOM 8 O4' A A 659 30.055 109.926 22.116 1.00 57.71 O
ATOM 9 C3' A A 659 29.337 112.158 21.794 1.00 56.08 C
ATOM 10 O3' A A 659 28.104 112.796 21.551 1.00 55.45 O
ATOM 11 C2' A A 659 29.578 111.952 23.280 1.00 57.72 C
ATOM 12 O2' A A 659 28.368 111.764 23.984 1.00 58.21 O
ATOM 13 C1' A A 659 30.396 110.648 23.281 1.00 59.00 C
ATOM 14 N9 A A 659 31.846 110.852 23.258 1.00 60.74 N
ATOM 15 C8 A A 659 32.673 110.903 22.162 1.00 61.34 C
ATOM 16 N7 A A 659 33.924 111.148 22.454 1.00 61.78 N
ATOM 17 C5 A A 659 33.928 111.252 23.837 1.00 61.81 C
ATOM 18 C6 A A 659 34.953 111.510 24.760 1.00 61.79 C
ATOM 19 N6 A A 659 36.219 111.742 24.409 1.00 61.84 N
ATOM 20 N1 A A 659 34.627 111.532 26.073 1.00 61.84 N
ATOM 21 C2 A A 659 33.351 111.321 26.420 1.00 61.98 C
ATOM 22 N3 A A 659 32.297 111.080 25.643 1.00 62.14 N
ATOM 23 C4 A A 659 32.658 111.057 24.346 1.00 61.50 C
ATOM 24 P G A 660 27.984 114.379 21.662 1.00 55.93 P
ATOM 25 OP1 G A 660 26.918 114.794 20.711 1.00 56.29 O
ATOM 26 OP2 G A 660 29.345 114.949 21.531 1.00 55.47 O
ATOM 27 O5' G A 660 27.443 114.605 23.141 1.00 55.12 O
TER
ATOM 1 O3' G B 657 37.502 107.334 17.434 1.00 56.96 O
ATOM 2 P G B 658 36.823 108.770 17.678 1.00 58.63 P
ATOM 3 OP1 G B 658 36.626 109.382 16.342 1.00 59.32 O
ATOM 4 OP2 G B 658 37.602 109.496 18.709 1.00 59.71 O
ATOM 5 O5' G B 658 35.401 108.445 18.310 1.00 57.19 O
ATOM 6 C5' G B 658 34.438 107.659 17.608 1.00 56.00 C
ATOM 7 C4' G B 658 33.242 107.418 18.485 1.00 56.06 C
ATOM 8 O4' G B 658 33.627 106.604 19.618 1.00 57.09 O
ATOM 9 C3' G B 658 32.625 108.659 19.099 1.00 56.00 C
ATOM 10 O3' G B 658 31.743 109.266 18.145 1.00 55.89 O
ATOM 11 C2' G B 658 31.885 108.061 20.292 1.00 56.92 C
ATOM 12 O2' G B 658 30.714 107.398 19.876 1.00 57.44 O
ATOM 13 C1' G B 658 32.845 106.954 20.743 1.00 58.34 C
ATOM 14 N9 G B 658 33.739 107.324 21.837 1.00 61.79 N
ATOM 15 C8 G B 658 35.085 107.585 21.744 1.00 62.76 C
ATOM 16 N7 G B 658 35.617 107.961 22.876 1.00 63.45 N
ATOM 17 C5 G B 658 34.564 107.933 23.780 1.00 64.49 C
ATOM 18 C6 G B 658 34.532 108.260 25.155 1.00 65.14 C
ATOM 19 O6 G B 658 35.453 108.684 25.865 1.00 67.38 O
ATOM 20 N1 G B 658 33.266 108.067 25.702 1.00 65.17 N
ATOM 21 C2 G B 658 32.167 107.630 25.010 1.00 65.20 C
ATOM 22 N2 G B 658 31.045 107.489 25.710 1.00 64.53 N
ATOM 23 N3 G B 658 32.175 107.344 23.713 1.00 65.66 N
ATOM 24 C4 G B 658 33.401 107.517 23.165 1.00 63.97 C
ATOM 25 P A B 659 31.518 110.863 18.137 1.00 56.56 P
ATOM 26 OP1 A B 659 30.485 111.188 17.124 1.00 57.23 O
ATOM 27 OP2 A B 659 32.850 111.554 18.073 1.00 58.96 O
ATOM 28 O5' A B 659 30.820 111.152 19.536 1.00 56.61 O
TER
Atoms:
OP1: (30.485,111.188,17.124)
OP2: (32.850,111.554,18.073)
C3': (29.337,112.158,21.794)
C1': (30.396,110.648,23.281)
C5': (29.535,110.576,19.825)
O4': (30.055,109.926,22.116)
C8: (32.673,110.903,22.162)
O2': (28.368,111.764,23.984)
C6: (34.953,111.510,24.760)
C5: (33.928,111.252,23.837)
C4: (32.658,111.057,24.346)
P: (31.518,110.863,18.137)
C4': (29.194,110.740,21.284)
C2': (29.578,111.952,23.280)
C2: (33.351,111.321,26.420)
N1: (34.627,111.532,26.073)
N3: (32.297,111.080,25.643)
N6: (36.219,111.742,24.409)
N7: (33.924,111.148,22.454)
N9: (31.846,110.852,23.258)
O5': (30.820,111.152,19.536)
O3': (28.104,112.796,21.551)
OP2: (32.850,111.554,18.073)
C3': (29.337,112.158,21.794)
C1': (30.396,110.648,23.281)
C5': (29.535,110.576,19.825)
O4': (30.055,109.926,22.116)
C8: (32.673,110.903,22.162)
O2': (28.368,111.764,23.984)
C6: (34.953,111.510,24.760)
C5: (33.928,111.252,23.837)
C4: (32.658,111.057,24.346)
P: (31.518,110.863,18.137)
C4': (29.194,110.740,21.284)
C2': (29.578,111.952,23.280)
C2: (33.351,111.321,26.420)
N1: (34.627,111.532,26.073)
N3: (32.297,111.080,25.643)
N6: (36.219,111.742,24.409)
N7: (33.924,111.148,22.454)
N9: (31.846,110.852,23.258)
O5': (30.820,111.152,19.536)
O3': (28.104,112.796,21.551)
OP1: (36.626,109.382,16.342)
OP2: (37.602,109.496,18.709)
C3': (32.625,108.659,19.099)
C1': (32.845,106.954,20.743)
C5': (34.438,107.659,17.608)
O6: (35.453,108.684,25.865)
O4': (33.627,106.604,19.618)
C8: (35.085,107.585,21.744)
C2: (32.167,107.630,25.010)
C6: (34.532,108.260,25.155)
C5: (34.564,107.933,23.780)
C4: (33.401,107.517,23.165)
P: (36.823,108.770,17.678)
C4': (33.242,107.418,18.485)
C2': (31.885,108.061,20.292)
O2': (30.714,107.398,19.876)
N1: (33.266,108.067,25.702)
N2: (31.045,107.489,25.710)
N3: (32.175,107.344,23.713)
N7: (35.617,107.961,22.876)
N9: (33.739,107.324,21.837)
O5': (35.401,108.445,18.310)
O3': (31.743,109.266,18.145)
OP2: (37.602,109.496,18.709)
C3': (32.625,108.659,19.099)
C1': (32.845,106.954,20.743)
C5': (34.438,107.659,17.608)
O6: (35.453,108.684,25.865)
O4': (33.627,106.604,19.618)
C8: (35.085,107.585,21.744)
C2: (32.167,107.630,25.010)
C6: (34.532,108.260,25.155)
C5: (34.564,107.933,23.780)
C4: (33.401,107.517,23.165)
P: (36.823,108.770,17.678)
C4': (33.242,107.418,18.485)
C2': (31.885,108.061,20.292)
O2': (30.714,107.398,19.876)
N1: (33.266,108.067,25.702)
N2: (31.045,107.489,25.710)
N3: (32.175,107.344,23.713)
N7: (35.617,107.961,22.876)
N9: (33.739,107.324,21.837)
O5': (35.401,108.445,18.310)
O3': (31.743,109.266,18.145)
Image (generated by PyMOL):