ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3I56:01272:01271

Extra

PDB:
ATOM 1 O3' G A1271 6.029 128.245 54.233 1.00 28.42 O
ATOM 2 P A A1272 5.723 129.710 53.660 1.00 29.86 P
ATOM 3 OP1 A A1272 4.739 130.345 54.575 1.00 29.93 O
ATOM 4 OP2 A A1272 5.428 129.615 52.216 1.00 29.95 O
ATOM 5 O5' A A1272 7.105 130.481 53.821 1.00 30.52 O
ATOM 6 C5' A A1272 7.502 130.987 55.099 1.00 30.67 C
ATOM 7 C4' A A1272 8.524 132.078 54.942 1.00 29.21 C
ATOM 8 O4' A A1272 9.785 131.519 54.522 1.00 28.61 O
ATOM 9 C3' A A1272 8.213 133.136 53.905 1.00 30.64 C
ATOM 10 O3' A A1272 7.334 134.109 54.448 1.00 33.26 O
ATOM 11 C2' A A1272 9.594 133.705 53.628 1.00 30.97 C
ATOM 12 O2' A A1272 10.015 134.581 54.657 1.00 31.22 O
ATOM 13 C1' A A1272 10.449 132.438 53.679 1.00 30.50 C
ATOM 14 N9 A A1272 10.619 131.797 52.379 1.00 32.87 N
ATOM 15 C8 A A1272 9.918 130.728 51.863 1.00 34.19 C
ATOM 16 N7 A A1272 10.320 130.357 50.672 1.00 34.12 N
ATOM 17 C5 A A1272 11.347 131.241 50.381 1.00 33.81 C
ATOM 18 C6 A A1272 12.182 131.366 49.277 1.00 34.60 C
ATOM 19 N6 A A1272 12.128 130.553 48.220 1.00 34.77 N
ATOM 20 N1 A A1272 13.096 132.363 49.291 1.00 35.33 N
ATOM 21 C2 A A1272 13.163 133.162 50.367 1.00 33.17 C
ATOM 22 N3 A A1272 12.439 133.131 51.477 1.00 32.23 N
ATOM 23 C4 A A1272 11.537 132.138 51.420 1.00 33.12 C
ATOM 24 P U A1273 6.386 134.971 53.478 1.00 35.53 P
ATOM 25 OP1 U A1273 4.993 134.687 53.901 1.00 34.33 O
ATOM 26 OP2 U A1273 6.776 134.794 52.041 1.00 35.52 O
ATOM 27 O5' U A1273 6.726 136.470 53.889 1.00 34.40 O
TER

ATOM 1 O3' G B1270 5.780 123.175 51.017 1.00 34.41 O
ATOM 2 P G B1271 5.499 124.723 50.734 1.00 35.48 P
ATOM 3 OP1 G B1271 4.073 124.963 51.069 1.00 36.46 O
ATOM 4 OP2 G B1271 6.008 125.067 49.381 1.00 33.24 O
ATOM 5 O5' G B1271 6.389 125.454 51.833 1.00 34.60 O
ATOM 6 C5' G B1271 6.173 125.192 53.228 1.00 32.05 C
ATOM 7 C4' G B1271 7.075 126.051 54.073 1.00 30.03 C
ATOM 8 O4' G B1271 8.455 125.629 53.928 1.00 30.28 O
ATOM 9 C3' G B1271 7.134 127.527 53.733 1.00 28.41 C
ATOM 10 O3' G B1271 6.029 128.245 54.233 1.00 28.42 O
ATOM 11 C2' G B1271 8.405 127.937 54.449 1.00 28.61 C
ATOM 12 O2' G B1271 8.182 128.020 55.841 1.00 25.57 O
ATOM 13 C1' G B1271 9.309 126.742 54.145 1.00 29.60 C
ATOM 14 N9 G B1271 10.129 126.948 52.953 1.00 30.85 N
ATOM 15 C8 G B1271 9.994 126.343 51.726 1.00 30.79 C
ATOM 16 N7 G B1271 10.897 126.724 50.863 1.00 30.73 N
ATOM 17 C5 G B1271 11.670 127.643 51.557 1.00 31.82 C
ATOM 18 C6 G B1271 12.802 128.395 51.141 1.00 32.38 C
ATOM 19 O6 G B1271 13.355 128.408 50.035 1.00 31.95 O
ATOM 20 N1 G B1271 13.288 129.198 52.170 1.00 33.09 N
ATOM 21 C2 G B1271 12.749 129.274 53.436 1.00 32.67 C
ATOM 22 N2 G B1271 13.360 130.100 54.299 1.00 32.59 N
ATOM 23 N3 G B1271 11.690 128.588 53.829 1.00 31.91 N
ATOM 24 C4 G B1271 11.207 127.796 52.847 1.00 31.51 C
ATOM 25 P A B1272 5.723 129.710 53.660 1.00 29.86 P
ATOM 26 OP1 A B1272 4.739 130.345 54.575 1.00 29.93 O
ATOM 27 OP2 A B1272 5.428 129.615 52.216 1.00 29.95 O
ATOM 28 O5' A B1272 7.105 130.481 53.821 1.00 30.52 O
TER

Atoms:
OP1: (4.739,130.345,54.575)
OP2: (5.428,129.615,52.216)
C3': (8.213,133.136,53.905)
C1': (10.449,132.438,53.679)
C5': (7.502,130.987,55.099)
O4': (9.785,131.519,54.522)
C8: (9.918,130.728,51.863)
O2': (10.015,134.581,54.657)
C6: (12.182,131.366,49.277)
C5: (11.347,131.241,50.381)
C4: (11.537,132.138,51.420)
P: (5.723,129.710,53.660)
C4': (8.524,132.078,54.942)
C2': (9.594,133.705,53.628)
C2: (13.163,133.162,50.367)
N1: (13.096,132.363,49.291)
N3: (12.439,133.131,51.477)
N6: (12.128,130.553,48.220)
N7: (10.320,130.357,50.672)
N9: (10.619,131.797,52.379)
O5': (7.105,130.481,53.821)
O3': (7.334,134.109,54.448)
OP1: (4.073,124.963,51.069)
OP2: (6.008,125.067,49.381)
C3': (7.134,127.527,53.733)
C1': (9.309,126.742,54.145)
C5': (6.173,125.192,53.228)
O6: (13.355,128.408,50.035)
O4': (8.455,125.629,53.928)
C8: (9.994,126.343,51.726)
C2: (12.749,129.274,53.436)
C6: (12.802,128.395,51.141)
C5: (11.670,127.643,51.557)
C4: (11.207,127.796,52.847)
P: (5.499,124.723,50.734)
C4': (7.075,126.051,54.073)
C2': (8.405,127.937,54.449)
O2': (8.182,128.020,55.841)
N1: (13.288,129.198,52.170)
N2: (13.360,130.100,54.299)
N3: (11.690,128.588,53.829)
N7: (10.897,126.724,50.863)
N9: (10.129,126.948,52.953)
O5': (6.389,125.454,51.833)
O3': (6.029,128.245,54.233)
Image (generated by PyMOL):
PyMOL image
show in jmol