Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01255:01254
Extra
PDB:
ATOM 1 O3' G A1254 40.154 98.159 72.958 1.00 33.37 O
ATOM 2 P A A1255 39.087 98.463 71.792 1.00 32.76 P
ATOM 3 OP1 A A1255 39.844 98.631 70.532 1.00 32.46 O
ATOM 4 OP2 A A1255 38.170 99.533 72.239 1.00 31.00 O
ATOM 5 O5' A A1255 38.275 97.103 71.642 1.00 34.32 O
ATOM 6 C5' A A1255 38.907 95.921 71.094 1.00 36.22 C
ATOM 7 C4' A A1255 37.930 94.768 71.056 1.00 37.76 C
ATOM 8 O4' A A1255 37.555 94.396 72.409 1.00 37.30 O
ATOM 9 C3' A A1255 36.607 95.066 70.369 1.00 38.02 C
ATOM 10 O3' A A1255 36.695 94.920 68.958 1.00 36.50 O
ATOM 11 C2' A A1255 35.684 94.040 71.004 1.00 38.00 C
ATOM 12 O2' A A1255 35.900 92.746 70.486 1.00 41.39 O
ATOM 13 C1' A A1255 36.174 94.065 72.449 1.00 38.45 C
ATOM 14 N9 A A1255 35.472 95.092 73.220 1.00 37.93 N
ATOM 15 C8 A A1255 35.880 96.370 73.489 1.00 37.58 C
ATOM 16 N7 A A1255 35.004 97.074 74.158 1.00 37.62 N
ATOM 17 C5 A A1255 33.950 96.198 74.348 1.00 37.97 C
ATOM 18 C6 A A1255 32.701 96.352 74.958 1.00 38.78 C
ATOM 19 N6 A A1255 32.277 97.495 75.489 1.00 40.36 N
ATOM 20 N1 A A1255 31.883 95.283 74.993 1.00 39.80 N
ATOM 21 C2 A A1255 32.299 94.144 74.431 1.00 41.96 C
ATOM 22 N3 A A1255 33.445 93.882 73.808 1.00 41.05 N
ATOM 23 C4 A A1255 34.234 94.967 73.798 1.00 38.75 C
ATOM 24 P U A1256 35.728 95.781 68.018 1.00 36.21 P
ATOM 25 OP1 U A1256 36.006 95.427 66.607 1.00 34.92 O
ATOM 26 OP2 U A1256 35.827 97.192 68.453 1.00 35.48 O
ATOM 27 O5' U A1256 34.271 95.258 68.401 1.00 38.48 O
TER
ATOM 1 O3' A B1253 41.615 101.803 77.734 1.00 33.79 O
ATOM 2 P G B1254 40.778 102.155 76.414 1.00 34.05 P
ATOM 3 OP1 G B1254 41.728 102.795 75.485 1.00 34.58 O
ATOM 4 OP2 G B1254 39.545 102.877 76.821 1.00 33.69 O
ATOM 5 O5' G B1254 40.406 100.735 75.805 1.00 33.07 O
ATOM 6 C5' G B1254 41.445 99.846 75.382 1.00 36.12 C
ATOM 7 C4' G B1254 40.930 98.429 75.250 1.00 37.02 C
ATOM 8 O4' G B1254 40.475 97.929 76.537 1.00 37.33 O
ATOM 9 C3' G B1254 39.747 98.180 74.328 1.00 34.87 C
ATOM 10 O3' G B1254 40.154 98.159 72.958 1.00 33.37 O
ATOM 11 C2' G B1254 39.287 96.812 74.815 1.00 35.09 C
ATOM 12 O2' G B1254 40.152 95.787 74.382 1.00 36.85 O
ATOM 13 C1' G B1254 39.460 96.958 76.330 1.00 36.76 C
ATOM 14 N9 G B1254 38.227 97.413 76.968 1.00 37.22 N
ATOM 15 C8 G B1254 37.927 98.679 77.406 1.00 37.15 C
ATOM 16 N7 G B1254 36.707 98.788 77.857 1.00 37.61 N
ATOM 17 C5 G B1254 36.176 97.513 77.726 1.00 37.26 C
ATOM 18 C6 G B1254 34.888 97.019 78.034 1.00 36.58 C
ATOM 19 O6 G B1254 33.920 97.632 78.482 1.00 37.59 O
ATOM 20 N1 G B1254 34.780 95.664 77.760 1.00 37.16 N
ATOM 21 C2 G B1254 35.777 94.882 77.243 1.00 38.54 C
ATOM 22 N2 G B1254 35.482 93.593 77.044 1.00 40.16 N
ATOM 23 N3 G B1254 36.979 95.330 76.941 1.00 39.48 N
ATOM 24 C4 G B1254 37.109 96.647 77.204 1.00 38.16 C
ATOM 25 P A B1255 39.087 98.463 71.792 1.00 32.76 P
ATOM 26 OP1 A B1255 39.844 98.631 70.532 1.00 32.46 O
ATOM 27 OP2 A B1255 38.170 99.533 72.239 1.00 31.00 O
ATOM 28 O5' A B1255 38.275 97.103 71.642 1.00 34.32 O
TER
ATOM 2 P A A1255 39.087 98.463 71.792 1.00 32.76 P
ATOM 3 OP1 A A1255 39.844 98.631 70.532 1.00 32.46 O
ATOM 4 OP2 A A1255 38.170 99.533 72.239 1.00 31.00 O
ATOM 5 O5' A A1255 38.275 97.103 71.642 1.00 34.32 O
ATOM 6 C5' A A1255 38.907 95.921 71.094 1.00 36.22 C
ATOM 7 C4' A A1255 37.930 94.768 71.056 1.00 37.76 C
ATOM 8 O4' A A1255 37.555 94.396 72.409 1.00 37.30 O
ATOM 9 C3' A A1255 36.607 95.066 70.369 1.00 38.02 C
ATOM 10 O3' A A1255 36.695 94.920 68.958 1.00 36.50 O
ATOM 11 C2' A A1255 35.684 94.040 71.004 1.00 38.00 C
ATOM 12 O2' A A1255 35.900 92.746 70.486 1.00 41.39 O
ATOM 13 C1' A A1255 36.174 94.065 72.449 1.00 38.45 C
ATOM 14 N9 A A1255 35.472 95.092 73.220 1.00 37.93 N
ATOM 15 C8 A A1255 35.880 96.370 73.489 1.00 37.58 C
ATOM 16 N7 A A1255 35.004 97.074 74.158 1.00 37.62 N
ATOM 17 C5 A A1255 33.950 96.198 74.348 1.00 37.97 C
ATOM 18 C6 A A1255 32.701 96.352 74.958 1.00 38.78 C
ATOM 19 N6 A A1255 32.277 97.495 75.489 1.00 40.36 N
ATOM 20 N1 A A1255 31.883 95.283 74.993 1.00 39.80 N
ATOM 21 C2 A A1255 32.299 94.144 74.431 1.00 41.96 C
ATOM 22 N3 A A1255 33.445 93.882 73.808 1.00 41.05 N
ATOM 23 C4 A A1255 34.234 94.967 73.798 1.00 38.75 C
ATOM 24 P U A1256 35.728 95.781 68.018 1.00 36.21 P
ATOM 25 OP1 U A1256 36.006 95.427 66.607 1.00 34.92 O
ATOM 26 OP2 U A1256 35.827 97.192 68.453 1.00 35.48 O
ATOM 27 O5' U A1256 34.271 95.258 68.401 1.00 38.48 O
TER
ATOM 1 O3' A B1253 41.615 101.803 77.734 1.00 33.79 O
ATOM 2 P G B1254 40.778 102.155 76.414 1.00 34.05 P
ATOM 3 OP1 G B1254 41.728 102.795 75.485 1.00 34.58 O
ATOM 4 OP2 G B1254 39.545 102.877 76.821 1.00 33.69 O
ATOM 5 O5' G B1254 40.406 100.735 75.805 1.00 33.07 O
ATOM 6 C5' G B1254 41.445 99.846 75.382 1.00 36.12 C
ATOM 7 C4' G B1254 40.930 98.429 75.250 1.00 37.02 C
ATOM 8 O4' G B1254 40.475 97.929 76.537 1.00 37.33 O
ATOM 9 C3' G B1254 39.747 98.180 74.328 1.00 34.87 C
ATOM 10 O3' G B1254 40.154 98.159 72.958 1.00 33.37 O
ATOM 11 C2' G B1254 39.287 96.812 74.815 1.00 35.09 C
ATOM 12 O2' G B1254 40.152 95.787 74.382 1.00 36.85 O
ATOM 13 C1' G B1254 39.460 96.958 76.330 1.00 36.76 C
ATOM 14 N9 G B1254 38.227 97.413 76.968 1.00 37.22 N
ATOM 15 C8 G B1254 37.927 98.679 77.406 1.00 37.15 C
ATOM 16 N7 G B1254 36.707 98.788 77.857 1.00 37.61 N
ATOM 17 C5 G B1254 36.176 97.513 77.726 1.00 37.26 C
ATOM 18 C6 G B1254 34.888 97.019 78.034 1.00 36.58 C
ATOM 19 O6 G B1254 33.920 97.632 78.482 1.00 37.59 O
ATOM 20 N1 G B1254 34.780 95.664 77.760 1.00 37.16 N
ATOM 21 C2 G B1254 35.777 94.882 77.243 1.00 38.54 C
ATOM 22 N2 G B1254 35.482 93.593 77.044 1.00 40.16 N
ATOM 23 N3 G B1254 36.979 95.330 76.941 1.00 39.48 N
ATOM 24 C4 G B1254 37.109 96.647 77.204 1.00 38.16 C
ATOM 25 P A B1255 39.087 98.463 71.792 1.00 32.76 P
ATOM 26 OP1 A B1255 39.844 98.631 70.532 1.00 32.46 O
ATOM 27 OP2 A B1255 38.170 99.533 72.239 1.00 31.00 O
ATOM 28 O5' A B1255 38.275 97.103 71.642 1.00 34.32 O
TER
Atoms:
OP1: (39.844,98.631,70.532)
OP2: (38.170,99.533,72.239)
C3': (36.607,95.066,70.369)
C1': (36.174,94.065,72.449)
C5': (38.907,95.921,71.094)
O4': (37.555,94.396,72.409)
C8: (35.880,96.370,73.489)
O2': (35.900,92.746,70.486)
C6: (32.701,96.352,74.958)
C5: (33.950,96.198,74.348)
C4: (34.234,94.967,73.798)
P: (39.087,98.463,71.792)
C4': (37.930,94.768,71.056)
C2': (35.684,94.040,71.004)
C2: (32.299,94.144,74.431)
N1: (31.883,95.283,74.993)
N3: (33.445,93.882,73.808)
N6: (32.277,97.495,75.489)
N7: (35.004,97.074,74.158)
N9: (35.472,95.092,73.220)
O5': (38.275,97.103,71.642)
O3': (36.695,94.920,68.958)
OP2: (38.170,99.533,72.239)
C3': (36.607,95.066,70.369)
C1': (36.174,94.065,72.449)
C5': (38.907,95.921,71.094)
O4': (37.555,94.396,72.409)
C8: (35.880,96.370,73.489)
O2': (35.900,92.746,70.486)
C6: (32.701,96.352,74.958)
C5: (33.950,96.198,74.348)
C4: (34.234,94.967,73.798)
P: (39.087,98.463,71.792)
C4': (37.930,94.768,71.056)
C2': (35.684,94.040,71.004)
C2: (32.299,94.144,74.431)
N1: (31.883,95.283,74.993)
N3: (33.445,93.882,73.808)
N6: (32.277,97.495,75.489)
N7: (35.004,97.074,74.158)
N9: (35.472,95.092,73.220)
O5': (38.275,97.103,71.642)
O3': (36.695,94.920,68.958)
OP1: (41.728,102.795,75.485)
OP2: (39.545,102.877,76.821)
C3': (39.747,98.180,74.328)
C1': (39.460,96.958,76.330)
C5': (41.445,99.846,75.382)
O6: (33.920,97.632,78.482)
O4': (40.475,97.929,76.537)
C8: (37.927,98.679,77.406)
C2: (35.777,94.882,77.243)
C6: (34.888,97.019,78.034)
C5: (36.176,97.513,77.726)
C4: (37.109,96.647,77.204)
P: (40.778,102.155,76.414)
C4': (40.930,98.429,75.250)
C2': (39.287,96.812,74.815)
O2': (40.152,95.787,74.382)
N1: (34.780,95.664,77.760)
N2: (35.482,93.593,77.044)
N3: (36.979,95.330,76.941)
N7: (36.707,98.788,77.857)
N9: (38.227,97.413,76.968)
O5': (40.406,100.735,75.805)
O3': (40.154,98.159,72.958)
OP2: (39.545,102.877,76.821)
C3': (39.747,98.180,74.328)
C1': (39.460,96.958,76.330)
C5': (41.445,99.846,75.382)
O6: (33.920,97.632,78.482)
O4': (40.475,97.929,76.537)
C8: (37.927,98.679,77.406)
C2: (35.777,94.882,77.243)
C6: (34.888,97.019,78.034)
C5: (36.176,97.513,77.726)
C4: (37.109,96.647,77.204)
P: (40.778,102.155,76.414)
C4': (40.930,98.429,75.250)
C2': (39.287,96.812,74.815)
O2': (40.152,95.787,74.382)
N1: (34.780,95.664,77.760)
N2: (35.482,93.593,77.044)
N3: (36.979,95.330,76.941)
N7: (36.707,98.788,77.857)
N9: (38.227,97.413,76.968)
O5': (40.406,100.735,75.805)
O3': (40.154,98.159,72.958)
Image (generated by PyMOL):