Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:0351:0350
Extra
PDB:
ATOM 1 O3' G A 350 53.412 115.670 -6.651 1.00 95.56 O
ATOM 2 P A A 351 54.708 114.970 -7.294 1.00 95.91 P
ATOM 3 OP1 A A 351 54.241 114.255 -8.509 1.00 95.71 O
ATOM 4 OP2 A A 351 55.436 114.217 -6.231 1.00 95.69 O
ATOM 5 O5' A A 351 55.625 116.197 -7.735 1.00 95.34 O
ATOM 6 C5' A A 351 55.184 117.135 -8.739 1.00 95.23 C
ATOM 7 C4' A A 351 56.116 118.321 -8.779 1.00 95.15 C
ATOM 8 O4' A A 351 56.077 118.987 -7.488 1.00 94.48 O
ATOM 9 C3' A A 351 57.586 117.984 -8.991 1.00 95.15 C
ATOM 10 O3' A A 351 57.913 117.853 -10.371 1.00 95.83 O
ATOM 11 C2' A A 351 58.287 119.163 -8.336 1.00 94.86 C
ATOM 12 O2' A A 351 58.289 120.315 -9.153 1.00 94.98 O
ATOM 13 C1' A A 351 57.383 119.402 -7.127 1.00 94.68 C
ATOM 14 N9 A A 351 57.796 118.601 -5.979 1.00 94.42 N
ATOM 15 C8 A A 351 57.256 117.418 -5.537 1.00 94.38 C
ATOM 16 N7 A A 351 57.839 116.939 -4.466 1.00 94.42 N
ATOM 17 C5 A A 351 58.833 117.866 -4.186 1.00 94.34 C
ATOM 18 C6 A A 351 59.801 117.939 -3.170 1.00 94.37 C
ATOM 19 N6 A A 351 59.941 117.022 -2.211 1.00 94.32 N
ATOM 20 N1 A A 351 60.633 119.003 -3.176 1.00 94.54 N
ATOM 21 C2 A A 351 60.498 119.920 -4.144 1.00 94.34 C
ATOM 22 N3 A A 351 59.636 119.960 -5.151 1.00 94.42 N
ATOM 23 C4 A A 351 58.819 118.894 -5.114 1.00 94.49 C
ATOM 24 P C A 352 59.400 117.411 -10.800 1.00 96.49 P
ATOM 25 OP1 C A 352 59.520 117.654 -12.264 1.00 96.64 O
ATOM 26 OP2 C A 352 59.690 116.056 -10.254 1.00 96.36 O
ATOM 27 O5' C A 352 60.340 118.470 -10.073 1.00 95.63 O
TER
ATOM 1 O3' C B 349 51.868 113.424 -1.102 1.00 92.65 O
ATOM 2 P G B 350 53.011 113.101 -2.192 1.00 93.77 P
ATOM 3 OP1 G B 350 52.489 111.999 -3.045 1.00 94.02 O
ATOM 4 OP2 G B 350 54.317 112.932 -1.493 1.00 92.98 O
ATOM 5 O5' G B 350 53.072 114.424 -3.085 1.00 94.04 O
ATOM 6 C5' G B 350 51.945 114.813 -3.904 1.00 94.57 C
ATOM 7 C4' G B 350 52.206 116.145 -4.579 1.00 94.95 C
ATOM 8 O4' G B 350 52.308 117.201 -3.584 1.00 94.77 O
ATOM 9 C3' G B 350 53.502 116.266 -5.365 1.00 95.14 C
ATOM 10 O3' G B 350 53.412 115.670 -6.651 1.00 95.56 O
ATOM 11 C2' G B 350 53.695 117.776 -5.429 1.00 94.78 C
ATOM 12 O2' G B 350 52.889 118.402 -6.412 1.00 94.51 O
ATOM 13 C1' G B 350 53.229 118.189 -4.029 1.00 94.37 C
ATOM 14 N9 G B 350 54.340 118.237 -3.084 1.00 93.71 N
ATOM 15 C8 G B 350 54.688 117.280 -2.159 1.00 93.40 C
ATOM 16 N7 G B 350 55.755 117.594 -1.473 1.00 93.54 N
ATOM 17 C5 G B 350 56.131 118.836 -1.971 1.00 93.47 C
ATOM 18 C6 G B 350 57.225 119.682 -1.620 1.00 93.22 C
ATOM 19 O6 G B 350 58.110 119.487 -0.776 1.00 93.21 O
ATOM 20 N1 G B 350 57.227 120.854 -2.373 1.00 92.88 N
ATOM 21 C2 G B 350 56.306 121.173 -3.345 1.00 92.92 C
ATOM 22 N2 G B 350 56.480 122.351 -3.969 1.00 92.98 N
ATOM 23 N3 G B 350 55.288 120.394 -3.684 1.00 93.19 N
ATOM 24 C4 G B 350 55.263 119.251 -2.960 1.00 93.51 C
ATOM 25 P A B 351 54.708 114.970 -7.294 1.00 95.91 P
ATOM 26 OP1 A B 351 54.241 114.255 -8.509 1.00 95.71 O
ATOM 27 OP2 A B 351 55.436 114.217 -6.231 1.00 95.69 O
ATOM 28 O5' A B 351 55.625 116.197 -7.735 1.00 95.34 O
TER
ATOM 2 P A A 351 54.708 114.970 -7.294 1.00 95.91 P
ATOM 3 OP1 A A 351 54.241 114.255 -8.509 1.00 95.71 O
ATOM 4 OP2 A A 351 55.436 114.217 -6.231 1.00 95.69 O
ATOM 5 O5' A A 351 55.625 116.197 -7.735 1.00 95.34 O
ATOM 6 C5' A A 351 55.184 117.135 -8.739 1.00 95.23 C
ATOM 7 C4' A A 351 56.116 118.321 -8.779 1.00 95.15 C
ATOM 8 O4' A A 351 56.077 118.987 -7.488 1.00 94.48 O
ATOM 9 C3' A A 351 57.586 117.984 -8.991 1.00 95.15 C
ATOM 10 O3' A A 351 57.913 117.853 -10.371 1.00 95.83 O
ATOM 11 C2' A A 351 58.287 119.163 -8.336 1.00 94.86 C
ATOM 12 O2' A A 351 58.289 120.315 -9.153 1.00 94.98 O
ATOM 13 C1' A A 351 57.383 119.402 -7.127 1.00 94.68 C
ATOM 14 N9 A A 351 57.796 118.601 -5.979 1.00 94.42 N
ATOM 15 C8 A A 351 57.256 117.418 -5.537 1.00 94.38 C
ATOM 16 N7 A A 351 57.839 116.939 -4.466 1.00 94.42 N
ATOM 17 C5 A A 351 58.833 117.866 -4.186 1.00 94.34 C
ATOM 18 C6 A A 351 59.801 117.939 -3.170 1.00 94.37 C
ATOM 19 N6 A A 351 59.941 117.022 -2.211 1.00 94.32 N
ATOM 20 N1 A A 351 60.633 119.003 -3.176 1.00 94.54 N
ATOM 21 C2 A A 351 60.498 119.920 -4.144 1.00 94.34 C
ATOM 22 N3 A A 351 59.636 119.960 -5.151 1.00 94.42 N
ATOM 23 C4 A A 351 58.819 118.894 -5.114 1.00 94.49 C
ATOM 24 P C A 352 59.400 117.411 -10.800 1.00 96.49 P
ATOM 25 OP1 C A 352 59.520 117.654 -12.264 1.00 96.64 O
ATOM 26 OP2 C A 352 59.690 116.056 -10.254 1.00 96.36 O
ATOM 27 O5' C A 352 60.340 118.470 -10.073 1.00 95.63 O
TER
ATOM 1 O3' C B 349 51.868 113.424 -1.102 1.00 92.65 O
ATOM 2 P G B 350 53.011 113.101 -2.192 1.00 93.77 P
ATOM 3 OP1 G B 350 52.489 111.999 -3.045 1.00 94.02 O
ATOM 4 OP2 G B 350 54.317 112.932 -1.493 1.00 92.98 O
ATOM 5 O5' G B 350 53.072 114.424 -3.085 1.00 94.04 O
ATOM 6 C5' G B 350 51.945 114.813 -3.904 1.00 94.57 C
ATOM 7 C4' G B 350 52.206 116.145 -4.579 1.00 94.95 C
ATOM 8 O4' G B 350 52.308 117.201 -3.584 1.00 94.77 O
ATOM 9 C3' G B 350 53.502 116.266 -5.365 1.00 95.14 C
ATOM 10 O3' G B 350 53.412 115.670 -6.651 1.00 95.56 O
ATOM 11 C2' G B 350 53.695 117.776 -5.429 1.00 94.78 C
ATOM 12 O2' G B 350 52.889 118.402 -6.412 1.00 94.51 O
ATOM 13 C1' G B 350 53.229 118.189 -4.029 1.00 94.37 C
ATOM 14 N9 G B 350 54.340 118.237 -3.084 1.00 93.71 N
ATOM 15 C8 G B 350 54.688 117.280 -2.159 1.00 93.40 C
ATOM 16 N7 G B 350 55.755 117.594 -1.473 1.00 93.54 N
ATOM 17 C5 G B 350 56.131 118.836 -1.971 1.00 93.47 C
ATOM 18 C6 G B 350 57.225 119.682 -1.620 1.00 93.22 C
ATOM 19 O6 G B 350 58.110 119.487 -0.776 1.00 93.21 O
ATOM 20 N1 G B 350 57.227 120.854 -2.373 1.00 92.88 N
ATOM 21 C2 G B 350 56.306 121.173 -3.345 1.00 92.92 C
ATOM 22 N2 G B 350 56.480 122.351 -3.969 1.00 92.98 N
ATOM 23 N3 G B 350 55.288 120.394 -3.684 1.00 93.19 N
ATOM 24 C4 G B 350 55.263 119.251 -2.960 1.00 93.51 C
ATOM 25 P A B 351 54.708 114.970 -7.294 1.00 95.91 P
ATOM 26 OP1 A B 351 54.241 114.255 -8.509 1.00 95.71 O
ATOM 27 OP2 A B 351 55.436 114.217 -6.231 1.00 95.69 O
ATOM 28 O5' A B 351 55.625 116.197 -7.735 1.00 95.34 O
TER
Atoms:
OP1: (54.241,114.255,-8.509)
OP2: (55.436,114.217,-6.231)
C3': (57.586,117.984,-8.991)
C1': (57.383,119.402,-7.127)
C5': (55.184,117.135,-8.739)
O4': (56.077,118.987,-7.488)
C8: (57.256,117.418,-5.537)
O2': (58.289,120.315,-9.153)
C6: (59.801,117.939,-3.170)
C5: (58.833,117.866,-4.186)
C4: (58.819,118.894,-5.114)
P: (54.708,114.970,-7.294)
C4': (56.116,118.321,-8.779)
C2': (58.287,119.163,-8.336)
C2: (60.498,119.920,-4.144)
N1: (60.633,119.003,-3.176)
N3: (59.636,119.960,-5.151)
N6: (59.941,117.022,-2.211)
N7: (57.839,116.939,-4.466)
N9: (57.796,118.601,-5.979)
O5': (55.625,116.197,-7.735)
O3': (57.913,117.853,-10.371)
OP2: (55.436,114.217,-6.231)
C3': (57.586,117.984,-8.991)
C1': (57.383,119.402,-7.127)
C5': (55.184,117.135,-8.739)
O4': (56.077,118.987,-7.488)
C8: (57.256,117.418,-5.537)
O2': (58.289,120.315,-9.153)
C6: (59.801,117.939,-3.170)
C5: (58.833,117.866,-4.186)
C4: (58.819,118.894,-5.114)
P: (54.708,114.970,-7.294)
C4': (56.116,118.321,-8.779)
C2': (58.287,119.163,-8.336)
C2: (60.498,119.920,-4.144)
N1: (60.633,119.003,-3.176)
N3: (59.636,119.960,-5.151)
N6: (59.941,117.022,-2.211)
N7: (57.839,116.939,-4.466)
N9: (57.796,118.601,-5.979)
O5': (55.625,116.197,-7.735)
O3': (57.913,117.853,-10.371)
OP1: (52.489,111.999,-3.045)
OP2: (54.317,112.932,-1.493)
C3': (53.502,116.266,-5.365)
C1': (53.229,118.189,-4.029)
C5': (51.945,114.813,-3.904)
O6: (58.110,119.487,-0.776)
O4': (52.308,117.201,-3.584)
C8: (54.688,117.280,-2.159)
C2: (56.306,121.173,-3.345)
C6: (57.225,119.682,-1.620)
C5: (56.131,118.836,-1.971)
C4: (55.263,119.251,-2.960)
P: (53.011,113.101,-2.192)
C4': (52.206,116.145,-4.579)
C2': (53.695,117.776,-5.429)
O2': (52.889,118.402,-6.412)
N1: (57.227,120.854,-2.373)
N2: (56.480,122.351,-3.969)
N3: (55.288,120.394,-3.684)
N7: (55.755,117.594,-1.473)
N9: (54.340,118.237,-3.084)
O5': (53.072,114.424,-3.085)
O3': (53.412,115.670,-6.651)
OP2: (54.317,112.932,-1.493)
C3': (53.502,116.266,-5.365)
C1': (53.229,118.189,-4.029)
C5': (51.945,114.813,-3.904)
O6: (58.110,119.487,-0.776)
O4': (52.308,117.201,-3.584)
C8: (54.688,117.280,-2.159)
C2: (56.306,121.173,-3.345)
C6: (57.225,119.682,-1.620)
C5: (56.131,118.836,-1.971)
C4: (55.263,119.251,-2.960)
P: (53.011,113.101,-2.192)
C4': (52.206,116.145,-4.579)
C2': (53.695,117.776,-5.429)
O2': (52.889,118.402,-6.412)
N1: (57.227,120.854,-2.373)
N2: (56.480,122.351,-3.969)
N3: (55.288,120.394,-3.684)
N7: (55.755,117.594,-1.473)
N9: (54.340,118.237,-3.084)
O5': (53.072,114.424,-3.085)
O3': (53.412,115.670,-6.651)
Image (generated by PyMOL):