Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0590:0589
Extra
PDB:
ATOM 1 O3' G A 589 -13.286 128.558 95.270 1.00 86.78 O
ATOM 2 P A A 590 -12.798 129.538 94.090 1.00 87.23 P
ATOM 3 OP1 A A 590 -12.965 130.939 94.575 1.00 87.05 O
ATOM 4 OP2 A A 590 -13.437 129.119 92.812 1.00 85.72 O
ATOM 5 O5' A A 590 -11.238 129.246 93.965 1.00 87.58 O
ATOM 6 C5' A A 590 -10.329 129.576 95.033 1.00 85.94 C
ATOM 7 C4' A A 590 -8.910 129.252 94.624 1.00 85.18 C
ATOM 8 O4' A A 590 -8.790 127.825 94.378 1.00 83.61 O
ATOM 9 C3' A A 590 -8.439 129.897 93.331 1.00 85.25 C
ATOM 10 O3' A A 590 -7.991 131.235 93.562 1.00 87.54 O
ATOM 11 C2' A A 590 -7.314 128.961 92.912 1.00 84.62 C
ATOM 12 O2' A A 590 -6.144 129.164 93.676 1.00 84.91 O
ATOM 13 C1' A A 590 -7.892 127.599 93.307 1.00 83.28 C
ATOM 14 N9 A A 590 -8.619 126.920 92.232 1.00 81.75 N
ATOM 15 C8 A A 590 -9.977 126.863 92.052 1.00 81.58 C
ATOM 16 N7 A A 590 -10.344 126.166 91.006 1.00 81.00 N
ATOM 17 C5 A A 590 -9.149 125.736 90.457 1.00 80.04 C
ATOM 18 C6 A A 590 -8.863 124.952 89.335 1.00 79.60 C
ATOM 19 N6 A A 590 -9.800 124.438 88.546 1.00 80.18 N
ATOM 20 N1 A A 590 -7.568 124.710 89.049 1.00 78.91 N
ATOM 21 C2 A A 590 -6.631 125.229 89.849 1.00 79.29 C
ATOM 22 N3 A A 590 -6.774 125.978 90.939 1.00 80.27 N
ATOM 23 C4 A A 590 -8.076 126.198 91.194 1.00 80.83 C
ATOM 24 P A A 591 -8.541 132.442 92.643 1.00 89.41 P
ATOM 25 OP1 A A 591 -8.135 133.716 93.301 1.00 88.53 O
ATOM 26 OP2 A A 591 -9.970 132.207 92.321 1.00 89.76 O
ATOM 27 O5' A A 591 -7.720 132.306 91.286 1.00 89.93 O
TER
ATOM 1 O3' G B 588 -18.345 124.788 95.412 1.00 88.03 O
ATOM 2 P G B 589 -17.860 125.792 94.248 1.00 88.50 P
ATOM 3 OP1 G B 589 -18.569 127.082 94.469 1.00 88.65 O
ATOM 4 OP2 G B 589 -17.974 125.104 92.932 1.00 87.36 O
ATOM 5 O5' G B 589 -16.315 126.031 94.553 1.00 88.53 O
ATOM 6 C5' G B 589 -15.905 126.683 95.770 1.00 88.19 C
ATOM 7 C4' G B 589 -14.417 126.518 95.999 1.00 87.58 C
ATOM 8 O4' G B 589 -14.066 125.112 95.926 1.00 86.86 O
ATOM 9 C3' G B 589 -13.457 127.166 95.012 1.00 86.71 C
ATOM 10 O3' G B 589 -13.286 128.558 95.270 1.00 86.78 O
ATOM 11 C2' G B 589 -12.175 126.398 95.299 1.00 86.88 C
ATOM 12 O2' G B 589 -11.539 126.819 96.490 1.00 86.76 O
ATOM 13 C1' G B 589 -12.718 124.985 95.511 1.00 86.27 C
ATOM 14 N9 G B 589 -12.665 124.196 94.286 1.00 86.03 N
ATOM 15 C8 G B 589 -13.711 123.727 93.526 1.00 85.53 C
ATOM 16 N7 G B 589 -13.320 123.054 92.478 1.00 85.21 N
ATOM 17 C5 G B 589 -11.933 123.085 92.552 1.00 86.98 C
ATOM 18 C6 G B 589 -10.946 122.533 91.688 1.00 87.79 C
ATOM 19 O6 G B 589 -11.107 121.877 90.650 1.00 88.37 O
ATOM 20 N1 G B 589 -9.658 122.814 92.140 1.00 87.31 N
ATOM 21 C2 G B 589 -9.355 123.532 93.271 1.00 86.50 C
ATOM 22 N2 G B 589 -8.059 123.704 93.535 1.00 86.82 N
ATOM 23 N3 G B 589 -10.259 124.043 94.082 1.00 86.45 N
ATOM 24 C4 G B 589 -11.518 123.785 93.664 1.00 86.76 C
ATOM 25 P A B 590 -12.798 129.538 94.090 1.00 87.23 P
ATOM 26 OP1 A B 590 -12.965 130.939 94.575 1.00 87.05 O
ATOM 27 OP2 A B 590 -13.437 129.119 92.812 1.00 85.72 O
ATOM 28 O5' A B 590 -11.238 129.246 93.965 1.00 87.58 O
TER
ATOM 2 P A A 590 -12.798 129.538 94.090 1.00 87.23 P
ATOM 3 OP1 A A 590 -12.965 130.939 94.575 1.00 87.05 O
ATOM 4 OP2 A A 590 -13.437 129.119 92.812 1.00 85.72 O
ATOM 5 O5' A A 590 -11.238 129.246 93.965 1.00 87.58 O
ATOM 6 C5' A A 590 -10.329 129.576 95.033 1.00 85.94 C
ATOM 7 C4' A A 590 -8.910 129.252 94.624 1.00 85.18 C
ATOM 8 O4' A A 590 -8.790 127.825 94.378 1.00 83.61 O
ATOM 9 C3' A A 590 -8.439 129.897 93.331 1.00 85.25 C
ATOM 10 O3' A A 590 -7.991 131.235 93.562 1.00 87.54 O
ATOM 11 C2' A A 590 -7.314 128.961 92.912 1.00 84.62 C
ATOM 12 O2' A A 590 -6.144 129.164 93.676 1.00 84.91 O
ATOM 13 C1' A A 590 -7.892 127.599 93.307 1.00 83.28 C
ATOM 14 N9 A A 590 -8.619 126.920 92.232 1.00 81.75 N
ATOM 15 C8 A A 590 -9.977 126.863 92.052 1.00 81.58 C
ATOM 16 N7 A A 590 -10.344 126.166 91.006 1.00 81.00 N
ATOM 17 C5 A A 590 -9.149 125.736 90.457 1.00 80.04 C
ATOM 18 C6 A A 590 -8.863 124.952 89.335 1.00 79.60 C
ATOM 19 N6 A A 590 -9.800 124.438 88.546 1.00 80.18 N
ATOM 20 N1 A A 590 -7.568 124.710 89.049 1.00 78.91 N
ATOM 21 C2 A A 590 -6.631 125.229 89.849 1.00 79.29 C
ATOM 22 N3 A A 590 -6.774 125.978 90.939 1.00 80.27 N
ATOM 23 C4 A A 590 -8.076 126.198 91.194 1.00 80.83 C
ATOM 24 P A A 591 -8.541 132.442 92.643 1.00 89.41 P
ATOM 25 OP1 A A 591 -8.135 133.716 93.301 1.00 88.53 O
ATOM 26 OP2 A A 591 -9.970 132.207 92.321 1.00 89.76 O
ATOM 27 O5' A A 591 -7.720 132.306 91.286 1.00 89.93 O
TER
ATOM 1 O3' G B 588 -18.345 124.788 95.412 1.00 88.03 O
ATOM 2 P G B 589 -17.860 125.792 94.248 1.00 88.50 P
ATOM 3 OP1 G B 589 -18.569 127.082 94.469 1.00 88.65 O
ATOM 4 OP2 G B 589 -17.974 125.104 92.932 1.00 87.36 O
ATOM 5 O5' G B 589 -16.315 126.031 94.553 1.00 88.53 O
ATOM 6 C5' G B 589 -15.905 126.683 95.770 1.00 88.19 C
ATOM 7 C4' G B 589 -14.417 126.518 95.999 1.00 87.58 C
ATOM 8 O4' G B 589 -14.066 125.112 95.926 1.00 86.86 O
ATOM 9 C3' G B 589 -13.457 127.166 95.012 1.00 86.71 C
ATOM 10 O3' G B 589 -13.286 128.558 95.270 1.00 86.78 O
ATOM 11 C2' G B 589 -12.175 126.398 95.299 1.00 86.88 C
ATOM 12 O2' G B 589 -11.539 126.819 96.490 1.00 86.76 O
ATOM 13 C1' G B 589 -12.718 124.985 95.511 1.00 86.27 C
ATOM 14 N9 G B 589 -12.665 124.196 94.286 1.00 86.03 N
ATOM 15 C8 G B 589 -13.711 123.727 93.526 1.00 85.53 C
ATOM 16 N7 G B 589 -13.320 123.054 92.478 1.00 85.21 N
ATOM 17 C5 G B 589 -11.933 123.085 92.552 1.00 86.98 C
ATOM 18 C6 G B 589 -10.946 122.533 91.688 1.00 87.79 C
ATOM 19 O6 G B 589 -11.107 121.877 90.650 1.00 88.37 O
ATOM 20 N1 G B 589 -9.658 122.814 92.140 1.00 87.31 N
ATOM 21 C2 G B 589 -9.355 123.532 93.271 1.00 86.50 C
ATOM 22 N2 G B 589 -8.059 123.704 93.535 1.00 86.82 N
ATOM 23 N3 G B 589 -10.259 124.043 94.082 1.00 86.45 N
ATOM 24 C4 G B 589 -11.518 123.785 93.664 1.00 86.76 C
ATOM 25 P A B 590 -12.798 129.538 94.090 1.00 87.23 P
ATOM 26 OP1 A B 590 -12.965 130.939 94.575 1.00 87.05 O
ATOM 27 OP2 A B 590 -13.437 129.119 92.812 1.00 85.72 O
ATOM 28 O5' A B 590 -11.238 129.246 93.965 1.00 87.58 O
TER
Atoms:
OP1: (-12.965,130.939,94.575)
OP2: (-13.437,129.119,92.812)
C3': (-8.439,129.897,93.331)
C1': (-7.892,127.599,93.307)
C5': (-10.329,129.576,95.033)
O4': (-8.790,127.825,94.378)
C8: (-9.977,126.863,92.052)
O2': (-6.144,129.164,93.676)
C6: (-8.863,124.952,89.335)
C5: (-9.149,125.736,90.457)
C4: (-8.076,126.198,91.194)
P: (-12.798,129.538,94.090)
C4': (-8.910,129.252,94.624)
C2': (-7.314,128.961,92.912)
C2: (-6.631,125.229,89.849)
N1: (-7.568,124.710,89.049)
N3: (-6.774,125.978,90.939)
N6: (-9.800,124.438,88.546)
N7: (-10.344,126.166,91.006)
N9: (-8.619,126.920,92.232)
O5': (-11.238,129.246,93.965)
O3': (-7.991,131.235,93.562)
OP2: (-13.437,129.119,92.812)
C3': (-8.439,129.897,93.331)
C1': (-7.892,127.599,93.307)
C5': (-10.329,129.576,95.033)
O4': (-8.790,127.825,94.378)
C8: (-9.977,126.863,92.052)
O2': (-6.144,129.164,93.676)
C6: (-8.863,124.952,89.335)
C5: (-9.149,125.736,90.457)
C4: (-8.076,126.198,91.194)
P: (-12.798,129.538,94.090)
C4': (-8.910,129.252,94.624)
C2': (-7.314,128.961,92.912)
C2: (-6.631,125.229,89.849)
N1: (-7.568,124.710,89.049)
N3: (-6.774,125.978,90.939)
N6: (-9.800,124.438,88.546)
N7: (-10.344,126.166,91.006)
N9: (-8.619,126.920,92.232)
O5': (-11.238,129.246,93.965)
O3': (-7.991,131.235,93.562)
OP1: (-18.569,127.082,94.469)
OP2: (-17.974,125.104,92.932)
C3': (-13.457,127.166,95.012)
C1': (-12.718,124.985,95.511)
C5': (-15.905,126.683,95.770)
O6: (-11.107,121.877,90.650)
O4': (-14.066,125.112,95.926)
C8: (-13.711,123.727,93.526)
C2: (-9.355,123.532,93.271)
C6: (-10.946,122.533,91.688)
C5: (-11.933,123.085,92.552)
C4: (-11.518,123.785,93.664)
P: (-17.860,125.792,94.248)
C4': (-14.417,126.518,95.999)
C2': (-12.175,126.398,95.299)
O2': (-11.539,126.819,96.490)
N1: (-9.658,122.814,92.140)
N2: (-8.059,123.704,93.535)
N3: (-10.259,124.043,94.082)
N7: (-13.320,123.054,92.478)
N9: (-12.665,124.196,94.286)
O5': (-16.315,126.031,94.553)
O3': (-13.286,128.558,95.270)
OP2: (-17.974,125.104,92.932)
C3': (-13.457,127.166,95.012)
C1': (-12.718,124.985,95.511)
C5': (-15.905,126.683,95.770)
O6: (-11.107,121.877,90.650)
O4': (-14.066,125.112,95.926)
C8: (-13.711,123.727,93.526)
C2: (-9.355,123.532,93.271)
C6: (-10.946,122.533,91.688)
C5: (-11.933,123.085,92.552)
C4: (-11.518,123.785,93.664)
P: (-17.860,125.792,94.248)
C4': (-14.417,126.518,95.999)
C2': (-12.175,126.398,95.299)
O2': (-11.539,126.819,96.490)
N1: (-9.658,122.814,92.140)
N2: (-8.059,123.704,93.535)
N3: (-10.259,124.043,94.082)
N7: (-13.320,123.054,92.478)
N9: (-12.665,124.196,94.286)
O5': (-16.315,126.031,94.553)
O3': (-13.286,128.558,95.270)
Image (generated by PyMOL):