ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01943:01941

Extra

PDB:
ATOM 1 O3' U A1942 92.952 123.796 117.553 1.00 44.62 O
ATOM 2 P A A1943 94.374 124.381 117.086 1.00 44.57 P
ATOM 3 OP1 A A1943 94.754 123.671 115.844 1.00 47.71 O
ATOM 4 OP2 A A1943 95.292 124.368 118.242 1.00 46.32 O
ATOM 5 O5' A A1943 94.068 125.897 116.709 1.00 45.86 O
ATOM 6 C5' A A1943 93.091 126.226 115.712 1.00 43.98 C
ATOM 7 C4' A A1943 93.094 127.708 115.454 1.00 45.75 C
ATOM 8 O4' A A1943 92.740 128.418 116.672 1.00 45.71 O
ATOM 9 C3' A A1943 94.438 128.302 115.078 1.00 46.52 C
ATOM 10 O3' A A1943 94.725 128.112 113.704 1.00 47.04 O
ATOM 11 C2' A A1943 94.248 129.772 115.422 1.00 46.38 C
ATOM 12 O2' A A1943 93.526 130.486 114.444 1.00 47.75 O
ATOM 13 C1' A A1943 93.402 129.676 116.694 1.00 45.19 C
ATOM 14 N9 A A1943 94.200 129.782 117.917 1.00 46.00 N
ATOM 15 C8 A A1943 94.364 128.859 118.921 1.00 45.44 C
ATOM 16 N7 A A1943 95.156 129.261 119.881 1.00 45.26 N
ATOM 17 C5 A A1943 95.539 130.536 119.487 1.00 45.39 C
ATOM 18 C6 A A1943 96.389 131.490 120.071 1.00 46.14 C
ATOM 19 N6 A A1943 97.021 131.305 121.233 1.00 48.44 N
ATOM 20 N1 A A1943 96.572 132.654 119.415 1.00 44.45 N
ATOM 21 C2 A A1943 95.936 132.838 118.253 1.00 45.65 C
ATOM 22 N3 A A1943 95.114 132.019 117.604 1.00 44.67 N
ATOM 23 C4 A A1943 94.956 130.870 118.283 1.00 44.81 C
ATOM 24 P G A1944 96.225 127.764 113.249 1.00 48.66 P
ATOM 25 OP1 G A1944 96.256 127.734 111.758 1.00 48.55 O
ATOM 26 OP2 G A1944 96.682 126.573 114.022 1.00 46.64 O
ATOM 27 O5' G A1944 97.070 129.023 113.731 1.00 46.11 O
TER

ATOM 1 O3' A B1940 92.574 128.583 128.886 1.00 40.28 O
ATOM 2 P G B1941 93.713 128.434 127.784 1.00 42.57 P
ATOM 3 OP1 G B1941 93.812 126.985 127.503 1.00 43.94 O
ATOM 4 OP2 G B1941 94.919 129.179 128.211 1.00 46.88 O
ATOM 5 O5' G B1941 93.134 129.208 126.516 1.00 43.58 O
ATOM 6 C5' G B1941 91.950 128.756 125.844 1.00 42.28 C
ATOM 7 C4' G B1941 92.158 128.782 124.351 1.00 41.47 C
ATOM 8 O4' G B1941 92.152 130.153 123.864 1.00 40.38 O
ATOM 9 C3' G B1941 93.473 128.174 123.868 1.00 42.31 C
ATOM 10 O3' G B1941 93.239 127.497 122.646 1.00 42.65 O
ATOM 11 C2' G B1941 94.329 129.408 123.613 1.00 41.39 C
ATOM 12 O2' G B1941 95.381 129.213 122.693 1.00 42.50 O
ATOM 13 C1' G B1941 93.283 130.359 123.049 1.00 39.92 C
ATOM 14 N9 G B1941 93.644 131.770 123.087 1.00 44.29 N
ATOM 15 C8 G B1941 94.121 132.483 124.162 1.00 43.51 C
ATOM 16 N7 G B1941 94.365 133.734 123.876 1.00 44.33 N
ATOM 17 C5 G B1941 94.030 133.855 122.534 1.00 41.52 C
ATOM 18 C6 G B1941 94.093 134.976 121.671 1.00 42.19 C
ATOM 19 O6 G B1941 94.482 136.121 121.921 1.00 41.20 O
ATOM 20 N1 G B1941 93.644 134.665 120.394 1.00 43.09 N
ATOM 21 C2 G B1941 93.195 133.435 119.995 1.00 43.62 C
ATOM 22 N2 G B1941 92.785 133.349 118.724 1.00 45.82 N
ATOM 23 N3 G B1941 93.147 132.375 120.783 1.00 43.32 N
ATOM 24 C4 G B1941 93.576 132.657 122.032 1.00 43.80 C
ATOM 25 P U B1942 93.979 126.102 122.356 1.00 46.75 P
ATOM 26 OP1 U B1942 93.602 125.113 123.402 1.00 43.48 O
ATOM 27 OP2 U B1942 95.411 126.390 122.098 1.00 42.88 O
ATOM 28 O5' U B1942 93.311 125.622 120.996 1.00 46.13 O
TER

Atoms:
OP1: (94.754,123.671,115.844)
OP2: (95.292,124.368,118.242)
C3': (94.438,128.302,115.078)
C1': (93.402,129.676,116.694)
C5': (93.091,126.226,115.712)
O4': (92.740,128.418,116.672)
C8: (94.364,128.859,118.921)
O2': (93.526,130.486,114.444)
C6: (96.389,131.490,120.071)
C5: (95.539,130.536,119.487)
C4: (94.956,130.870,118.283)
P: (94.374,124.381,117.086)
C4': (93.094,127.708,115.454)
C2': (94.248,129.772,115.422)
C2: (95.936,132.838,118.253)
N1: (96.572,132.654,119.415)
N3: (95.114,132.019,117.604)
N6: (97.021,131.305,121.233)
N7: (95.156,129.261,119.881)
N9: (94.200,129.782,117.917)
O5': (94.068,125.897,116.709)
O3': (94.725,128.112,113.704)
OP1: (93.812,126.985,127.503)
OP2: (94.919,129.179,128.211)
C3': (93.473,128.174,123.868)
C1': (93.283,130.359,123.049)
C5': (91.950,128.756,125.844)
O6: (94.482,136.121,121.921)
O4': (92.152,130.153,123.864)
C8: (94.121,132.483,124.162)
C2: (93.195,133.435,119.995)
C6: (94.093,134.976,121.671)
C5: (94.030,133.855,122.534)
C4: (93.576,132.657,122.032)
P: (93.713,128.434,127.784)
C4': (92.158,128.782,124.351)
C2': (94.329,129.408,123.613)
O2': (95.381,129.213,122.693)
N1: (93.644,134.665,120.394)
N2: (92.785,133.349,118.724)
N3: (93.147,132.375,120.783)
N7: (94.365,133.734,123.876)
N9: (93.644,131.770,123.087)
O5': (93.134,129.208,126.516)
O3': (93.239,127.497,122.646)
Image (generated by PyMOL):
PyMOL image
show in jmol