Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ7:0561:0560
Extra
PDB:
ATOM 1 O3' G A 560 -13.459 94.823 127.484 1.00 85.00 O
ATOM 2 P A A 561 -12.945 93.835 128.642 1.00 85.35 P
ATOM 3 OP1 A A 561 -13.878 94.033 129.782 1.00 85.92 O
ATOM 4 OP2 A A 561 -11.487 94.039 128.844 1.00 85.51 O
ATOM 5 O5' A A 561 -13.153 92.372 128.041 1.00 85.73 O
ATOM 6 C5' A A 561 -14.460 91.774 128.007 1.00 86.15 C
ATOM 7 C4' A A 561 -14.391 90.378 127.442 1.00 86.82 C
ATOM 8 O4' A A 561 -13.889 90.444 126.083 1.00 87.44 O
ATOM 9 C3' A A 561 -13.445 89.398 128.118 1.00 88.42 C
ATOM 10 O3' A A 561 -13.973 88.831 129.317 1.00 90.95 O
ATOM 11 C2' A A 561 -13.248 88.360 127.022 1.00 88.06 C
ATOM 12 O2' A A 561 -14.339 87.472 126.880 1.00 86.29 O
ATOM 13 C1' A A 561 -13.160 89.260 125.787 1.00 88.17 C
ATOM 14 N9 A A 561 -11.767 89.618 125.511 1.00 88.05 N
ATOM 15 C8 A A 561 -11.094 90.776 125.833 1.00 87.48 C
ATOM 16 N7 A A 561 -9.825 90.757 125.505 1.00 87.02 N
ATOM 17 C5 A A 561 -9.651 89.511 124.914 1.00 86.97 C
ATOM 18 C6 A A 561 -8.523 88.870 124.366 1.00 86.79 C
ATOM 19 N6 A A 561 -7.305 89.417 124.328 1.00 85.76 N
ATOM 20 N1 A A 561 -8.692 87.627 123.858 1.00 86.47 N
ATOM 21 C2 A A 561 -9.911 87.075 123.905 1.00 86.73 C
ATOM 22 N3 A A 561 -11.044 87.573 124.397 1.00 86.67 N
ATOM 23 C4 A A 561 -10.843 88.807 124.895 1.00 87.16 C
ATOM 24 P C A 562 -12.967 88.320 130.474 1.00 92.41 P
ATOM 25 OP1 C A 562 -13.817 87.841 131.594 1.00 92.64 O
ATOM 26 OP2 C A 562 -11.955 89.384 130.728 1.00 92.83 O
ATOM 27 O5' C A 562 -12.224 87.060 129.832 1.00 89.71 O
TER
ATOM 1 O3' C B 559 -9.374 99.131 125.547 1.00 77.87 O
ATOM 2 P G B 560 -9.383 97.991 126.678 1.00 81.49 P
ATOM 3 OP1 G B 560 -9.797 98.650 127.945 1.00 80.30 O
ATOM 4 OP2 G B 560 -8.090 97.256 126.620 1.00 81.36 O
ATOM 5 O5' G B 560 -10.546 97.001 126.215 1.00 82.35 O
ATOM 6 C5' G B 560 -11.932 97.416 126.262 1.00 84.04 C
ATOM 7 C4' G B 560 -12.828 96.347 125.679 1.00 84.28 C
ATOM 8 O4' G B 560 -12.486 96.146 124.282 1.00 84.37 O
ATOM 9 C3' G B 560 -12.699 94.962 126.293 1.00 84.52 C
ATOM 10 O3' G B 560 -13.459 94.823 127.484 1.00 85.00 O
ATOM 11 C2' G B 560 -13.208 94.068 125.174 1.00 84.10 C
ATOM 12 O2' G B 560 -14.618 94.059 125.077 1.00 84.84 O
ATOM 13 C1' G B 560 -12.612 94.770 123.953 1.00 83.34 C
ATOM 14 N9 G B 560 -11.281 94.257 123.642 1.00 81.43 N
ATOM 15 C8 G B 560 -10.074 94.843 123.938 1.00 80.22 C
ATOM 16 N7 G B 560 -9.053 94.132 123.551 1.00 80.40 N
ATOM 17 C5 G B 560 -9.619 93.011 122.958 1.00 80.11 C
ATOM 18 C6 G B 560 -9.008 91.882 122.354 1.00 80.32 C
ATOM 19 O6 G B 560 -7.803 91.637 122.219 1.00 80.64 O
ATOM 20 N1 G B 560 -9.956 90.980 121.882 1.00 79.58 N
ATOM 21 C2 G B 560 -11.314 91.139 121.982 1.00 78.88 C
ATOM 22 N2 G B 560 -12.058 90.155 121.471 1.00 79.37 N
ATOM 23 N3 G B 560 -11.897 92.184 122.542 1.00 78.69 N
ATOM 24 C4 G B 560 -10.995 93.075 123.004 1.00 80.06 C
ATOM 25 P A B 561 -12.945 93.835 128.642 1.00 85.35 P
ATOM 26 OP1 A B 561 -13.878 94.033 129.782 1.00 85.92 O
ATOM 27 OP2 A B 561 -11.487 94.039 128.844 1.00 85.51 O
ATOM 28 O5' A B 561 -13.153 92.372 128.041 1.00 85.73 O
TER
ATOM 2 P A A 561 -12.945 93.835 128.642 1.00 85.35 P
ATOM 3 OP1 A A 561 -13.878 94.033 129.782 1.00 85.92 O
ATOM 4 OP2 A A 561 -11.487 94.039 128.844 1.00 85.51 O
ATOM 5 O5' A A 561 -13.153 92.372 128.041 1.00 85.73 O
ATOM 6 C5' A A 561 -14.460 91.774 128.007 1.00 86.15 C
ATOM 7 C4' A A 561 -14.391 90.378 127.442 1.00 86.82 C
ATOM 8 O4' A A 561 -13.889 90.444 126.083 1.00 87.44 O
ATOM 9 C3' A A 561 -13.445 89.398 128.118 1.00 88.42 C
ATOM 10 O3' A A 561 -13.973 88.831 129.317 1.00 90.95 O
ATOM 11 C2' A A 561 -13.248 88.360 127.022 1.00 88.06 C
ATOM 12 O2' A A 561 -14.339 87.472 126.880 1.00 86.29 O
ATOM 13 C1' A A 561 -13.160 89.260 125.787 1.00 88.17 C
ATOM 14 N9 A A 561 -11.767 89.618 125.511 1.00 88.05 N
ATOM 15 C8 A A 561 -11.094 90.776 125.833 1.00 87.48 C
ATOM 16 N7 A A 561 -9.825 90.757 125.505 1.00 87.02 N
ATOM 17 C5 A A 561 -9.651 89.511 124.914 1.00 86.97 C
ATOM 18 C6 A A 561 -8.523 88.870 124.366 1.00 86.79 C
ATOM 19 N6 A A 561 -7.305 89.417 124.328 1.00 85.76 N
ATOM 20 N1 A A 561 -8.692 87.627 123.858 1.00 86.47 N
ATOM 21 C2 A A 561 -9.911 87.075 123.905 1.00 86.73 C
ATOM 22 N3 A A 561 -11.044 87.573 124.397 1.00 86.67 N
ATOM 23 C4 A A 561 -10.843 88.807 124.895 1.00 87.16 C
ATOM 24 P C A 562 -12.967 88.320 130.474 1.00 92.41 P
ATOM 25 OP1 C A 562 -13.817 87.841 131.594 1.00 92.64 O
ATOM 26 OP2 C A 562 -11.955 89.384 130.728 1.00 92.83 O
ATOM 27 O5' C A 562 -12.224 87.060 129.832 1.00 89.71 O
TER
ATOM 1 O3' C B 559 -9.374 99.131 125.547 1.00 77.87 O
ATOM 2 P G B 560 -9.383 97.991 126.678 1.00 81.49 P
ATOM 3 OP1 G B 560 -9.797 98.650 127.945 1.00 80.30 O
ATOM 4 OP2 G B 560 -8.090 97.256 126.620 1.00 81.36 O
ATOM 5 O5' G B 560 -10.546 97.001 126.215 1.00 82.35 O
ATOM 6 C5' G B 560 -11.932 97.416 126.262 1.00 84.04 C
ATOM 7 C4' G B 560 -12.828 96.347 125.679 1.00 84.28 C
ATOM 8 O4' G B 560 -12.486 96.146 124.282 1.00 84.37 O
ATOM 9 C3' G B 560 -12.699 94.962 126.293 1.00 84.52 C
ATOM 10 O3' G B 560 -13.459 94.823 127.484 1.00 85.00 O
ATOM 11 C2' G B 560 -13.208 94.068 125.174 1.00 84.10 C
ATOM 12 O2' G B 560 -14.618 94.059 125.077 1.00 84.84 O
ATOM 13 C1' G B 560 -12.612 94.770 123.953 1.00 83.34 C
ATOM 14 N9 G B 560 -11.281 94.257 123.642 1.00 81.43 N
ATOM 15 C8 G B 560 -10.074 94.843 123.938 1.00 80.22 C
ATOM 16 N7 G B 560 -9.053 94.132 123.551 1.00 80.40 N
ATOM 17 C5 G B 560 -9.619 93.011 122.958 1.00 80.11 C
ATOM 18 C6 G B 560 -9.008 91.882 122.354 1.00 80.32 C
ATOM 19 O6 G B 560 -7.803 91.637 122.219 1.00 80.64 O
ATOM 20 N1 G B 560 -9.956 90.980 121.882 1.00 79.58 N
ATOM 21 C2 G B 560 -11.314 91.139 121.982 1.00 78.88 C
ATOM 22 N2 G B 560 -12.058 90.155 121.471 1.00 79.37 N
ATOM 23 N3 G B 560 -11.897 92.184 122.542 1.00 78.69 N
ATOM 24 C4 G B 560 -10.995 93.075 123.004 1.00 80.06 C
ATOM 25 P A B 561 -12.945 93.835 128.642 1.00 85.35 P
ATOM 26 OP1 A B 561 -13.878 94.033 129.782 1.00 85.92 O
ATOM 27 OP2 A B 561 -11.487 94.039 128.844 1.00 85.51 O
ATOM 28 O5' A B 561 -13.153 92.372 128.041 1.00 85.73 O
TER
Atoms:
OP1: (-13.878,94.033,129.782)
OP2: (-11.487,94.039,128.844)
C3': (-13.445,89.398,128.118)
C1': (-13.160,89.260,125.787)
C5': (-14.460,91.774,128.007)
O4': (-13.889,90.444,126.083)
C8: (-11.094,90.776,125.833)
O2': (-14.339,87.472,126.880)
C6: (-8.523,88.870,124.366)
C5: (-9.651,89.511,124.914)
C4: (-10.843,88.807,124.895)
P: (-12.945,93.835,128.642)
C4': (-14.391,90.378,127.442)
C2': (-13.248,88.360,127.022)
C2: (-9.911,87.075,123.905)
N1: (-8.692,87.627,123.858)
N3: (-11.044,87.573,124.397)
N6: (-7.305,89.417,124.328)
N7: (-9.825,90.757,125.505)
N9: (-11.767,89.618,125.511)
O5': (-13.153,92.372,128.041)
O3': (-13.973,88.831,129.317)
OP2: (-11.487,94.039,128.844)
C3': (-13.445,89.398,128.118)
C1': (-13.160,89.260,125.787)
C5': (-14.460,91.774,128.007)
O4': (-13.889,90.444,126.083)
C8: (-11.094,90.776,125.833)
O2': (-14.339,87.472,126.880)
C6: (-8.523,88.870,124.366)
C5: (-9.651,89.511,124.914)
C4: (-10.843,88.807,124.895)
P: (-12.945,93.835,128.642)
C4': (-14.391,90.378,127.442)
C2': (-13.248,88.360,127.022)
C2: (-9.911,87.075,123.905)
N1: (-8.692,87.627,123.858)
N3: (-11.044,87.573,124.397)
N6: (-7.305,89.417,124.328)
N7: (-9.825,90.757,125.505)
N9: (-11.767,89.618,125.511)
O5': (-13.153,92.372,128.041)
O3': (-13.973,88.831,129.317)
OP1: (-9.797,98.650,127.945)
OP2: (-8.090,97.256,126.620)
C3': (-12.699,94.962,126.293)
C1': (-12.612,94.770,123.953)
C5': (-11.932,97.416,126.262)
O6: (-7.803,91.637,122.219)
O4': (-12.486,96.146,124.282)
C8: (-10.074,94.843,123.938)
C2: (-11.314,91.139,121.982)
C6: (-9.008,91.882,122.354)
C5: (-9.619,93.011,122.958)
C4: (-10.995,93.075,123.004)
P: (-9.383,97.991,126.678)
C4': (-12.828,96.347,125.679)
C2': (-13.208,94.068,125.174)
O2': (-14.618,94.059,125.077)
N1: (-9.956,90.980,121.882)
N2: (-12.058,90.155,121.471)
N3: (-11.897,92.184,122.542)
N7: (-9.053,94.132,123.551)
N9: (-11.281,94.257,123.642)
O5': (-10.546,97.001,126.215)
O3': (-13.459,94.823,127.484)
OP2: (-8.090,97.256,126.620)
C3': (-12.699,94.962,126.293)
C1': (-12.612,94.770,123.953)
C5': (-11.932,97.416,126.262)
O6: (-7.803,91.637,122.219)
O4': (-12.486,96.146,124.282)
C8: (-10.074,94.843,123.938)
C2: (-11.314,91.139,121.982)
C6: (-9.008,91.882,122.354)
C5: (-9.619,93.011,122.958)
C4: (-10.995,93.075,123.004)
P: (-9.383,97.991,126.678)
C4': (-12.828,96.347,125.679)
C2': (-13.208,94.068,125.174)
O2': (-14.618,94.059,125.077)
N1: (-9.956,90.980,121.882)
N2: (-12.058,90.155,121.471)
N3: (-11.897,92.184,122.542)
N7: (-9.053,94.132,123.551)
N9: (-11.281,94.257,123.642)
O5': (-10.546,97.001,126.215)
O3': (-13.459,94.823,127.484)
Image (generated by PyMOL):