ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:02081:02080

Extra

PDB:
ATOM 1 O3' G A2080 118.290 105.615 28.091 1.00 82.10 O
ATOM 2 P A A2081 119.267 104.329 28.144 1.00 84.00 P
ATOM 3 OP1 A A2081 119.044 103.598 26.870 1.00 83.04 O
ATOM 4 OP2 A A2081 119.090 103.615 29.435 1.00 82.78 O
ATOM 5 O5' A A2081 120.739 104.942 28.134 1.00 84.39 O
ATOM 6 C5' A A2081 121.310 105.483 26.925 1.00 88.70 C
ATOM 7 C4' A A2081 122.766 105.826 27.140 1.00 92.01 C
ATOM 8 O4' A A2081 122.866 106.809 28.204 1.00 93.39 O
ATOM 9 C3' A A2081 123.652 104.684 27.611 1.00 94.02 C
ATOM 10 O3' A A2081 124.098 103.863 26.535 1.00 95.67 O
ATOM 11 C2' A A2081 124.790 105.423 28.299 1.00 94.78 C
ATOM 12 O2' A A2081 125.737 105.960 27.399 1.00 94.78 O
ATOM 13 C1' A A2081 124.030 106.564 28.979 1.00 95.27 C
ATOM 14 N9 A A2081 123.612 106.212 30.336 1.00 97.00 N
ATOM 15 C8 A A2081 122.342 105.940 30.788 1.00 97.91 C
ATOM 16 N7 A A2081 122.288 105.630 32.060 1.00 98.74 N
ATOM 17 C5 A A2081 123.609 105.707 32.478 1.00 98.92 C
ATOM 18 C6 A A2081 124.220 105.486 33.724 1.00 99.28 C
ATOM 19 N6 A A2081 123.550 105.131 34.823 1.00 99.21 N
ATOM 20 N1 A A2081 125.561 105.641 33.804 1.00 99.70 N
ATOM 21 C2 A A2081 126.232 105.995 32.699 1.00 99.44 C
ATOM 22 N3 A A2081 125.770 106.233 31.472 1.00 99.04 N
ATOM 23 C4 A A2081 124.435 106.069 31.428 1.00 98.45 C
ATOM 24 P G A2082 124.589 102.357 26.829 1.00 97.04 P
ATOM 25 OP1 G A2082 125.025 101.794 25.526 1.00 96.85 O
ATOM 26 OP2 G A2082 123.545 101.648 27.617 1.00 96.47 O
ATOM 27 O5' G A2082 125.868 102.543 27.764 1.00 97.18 O
TER

ATOM 1 O3' U B2079 113.374 105.704 32.069 1.00 66.75 O
ATOM 2 P G B2080 113.740 105.040 30.650 1.00 69.71 P
ATOM 3 OP1 G B2080 112.737 105.512 29.647 1.00 67.10 O
ATOM 4 OP2 G B2080 113.906 103.581 30.891 1.00 69.04 O
ATOM 5 O5' G B2080 115.181 105.650 30.312 1.00 71.22 O
ATOM 6 C5' G B2080 115.359 106.532 29.189 1.00 74.89 C
ATOM 7 C4' G B2080 116.733 107.181 29.194 1.00 77.40 C
ATOM 8 O4' G B2080 116.899 108.071 30.330 1.00 77.01 O
ATOM 9 C3' G B2080 117.989 106.329 29.290 1.00 78.59 C
ATOM 10 O3' G B2080 118.290 105.615 28.091 1.00 82.10 O
ATOM 11 C2' G B2080 119.030 107.417 29.524 1.00 78.26 C
ATOM 12 O2' G B2080 119.311 108.141 28.342 1.00 77.32 O
ATOM 13 C1' G B2080 118.287 108.344 30.493 1.00 77.69 C
ATOM 14 N9 G B2080 118.691 108.075 31.871 1.00 77.30 N
ATOM 15 C8 G B2080 117.976 107.438 32.857 1.00 77.72 C
ATOM 16 N7 G B2080 118.646 107.305 33.971 1.00 77.60 N
ATOM 17 C5 G B2080 119.872 107.902 33.709 1.00 77.27 C
ATOM 18 C6 G B2080 121.022 108.057 34.536 1.00 77.78 C
ATOM 19 O6 G B2080 121.191 107.691 35.706 1.00 77.37 O
ATOM 20 N1 G B2080 122.046 108.717 33.866 1.00 78.46 N
ATOM 21 C2 G B2080 121.980 109.172 32.574 1.00 78.59 C
ATOM 22 N2 G B2080 123.074 109.788 32.111 1.00 79.17 N
ATOM 23 N3 G B2080 120.919 109.035 31.795 1.00 78.35 N
ATOM 24 C4 G B2080 119.910 108.393 32.423 1.00 77.33 C
ATOM 25 P A B2081 119.267 104.329 28.144 1.00 84.00 P
ATOM 26 OP1 A B2081 119.044 103.598 26.870 1.00 83.04 O
ATOM 27 OP2 A B2081 119.090 103.615 29.435 1.00 82.78 O
ATOM 28 O5' A B2081 120.739 104.942 28.134 1.00 84.39 O
TER

Atoms:
OP1: (119.044,103.598,26.870)
OP2: (119.090,103.615,29.435)
C3': (123.652,104.684,27.611)
C1': (124.030,106.564,28.979)
C5': (121.310,105.483,26.925)
O4': (122.866,106.809,28.204)
C8: (122.342,105.940,30.788)
O2': (125.737,105.960,27.399)
C6: (124.220,105.486,33.724)
C5: (123.609,105.707,32.478)
C4: (124.435,106.069,31.428)
P: (119.267,104.329,28.144)
C4': (122.766,105.826,27.140)
C2': (124.790,105.423,28.299)
C2: (126.232,105.995,32.699)
N1: (125.561,105.641,33.804)
N3: (125.770,106.233,31.472)
N6: (123.550,105.131,34.823)
N7: (122.288,105.630,32.060)
N9: (123.612,106.212,30.336)
O5': (120.739,104.942,28.134)
O3': (124.098,103.863,26.535)
OP1: (112.737,105.512,29.647)
OP2: (113.906,103.581,30.891)
C3': (117.989,106.329,29.290)
C1': (118.287,108.344,30.493)
C5': (115.359,106.532,29.189)
O6: (121.191,107.691,35.706)
O4': (116.899,108.071,30.330)
C8: (117.976,107.438,32.857)
C2: (121.980,109.172,32.574)
C6: (121.022,108.057,34.536)
C5: (119.872,107.902,33.709)
C4: (119.910,108.393,32.423)
P: (113.740,105.040,30.650)
C4': (116.733,107.181,29.194)
C2': (119.030,107.417,29.524)
O2': (119.311,108.141,28.342)
N1: (122.046,108.717,33.866)
N2: (123.074,109.788,32.111)
N3: (120.919,109.035,31.795)
N7: (118.646,107.305,33.971)
N9: (118.691,108.075,31.871)
O5': (115.181,105.650,30.312)
O3': (118.290,105.615,28.091)
Image (generated by PyMOL):
PyMOL image
show in jmol