Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CJZ:A2:A1
Extra
PDB:
ATOM 1 O3' G A 1 -9.022 -4.128 16.508 1.00 35.56 O
ATOM 2 P A A 2 -7.647 -4.598 15.825 1.00 36.34 P
ATOM 3 OP1 A A 2 -7.066 -5.636 16.714 1.00 37.44 O
ATOM 4 OP2 A A 2 -6.863 -3.401 15.490 1.00 35.72 O
ATOM 5 O5' A A 2 -8.086 -5.290 14.450 1.00 36.01 O
ATOM 6 C5' A A 2 -8.687 -6.584 14.464 1.00 34.58 C
ATOM 7 C4' A A 2 -9.091 -7.011 13.063 1.00 34.02 C
ATOM 8 O4' A A 2 -10.028 -6.075 12.446 1.00 31.58 O
ATOM 9 C3' A A 2 -7.920 -7.079 12.102 1.00 33.11 C
ATOM 10 O3' A A 2 -7.174 -8.281 12.286 1.00 33.31 O
ATOM 11 C2' A A 2 -8.656 -7.020 10.768 1.00 33.19 C
ATOM 12 O2' A A 2 -9.202 -8.279 10.392 1.00 31.87 O
ATOM 13 C1' A A 2 -9.735 -5.977 11.060 1.00 32.89 C
ATOM 14 N9 A A 2 -9.297 -4.613 10.746 1.00 32.65 N
ATOM 15 C8 A A 2 -8.821 -3.681 11.622 1.00 32.68 C
ATOM 16 N7 A A 2 -8.497 -2.540 11.080 1.00 30.93 N
ATOM 17 C5 A A 2 -8.761 -2.741 9.750 1.00 32.37 C
ATOM 18 C6 A A 2 -8.612 -1.892 8.643 1.00 32.51 C
ATOM 19 N6 A A 2 -8.155 -0.639 8.756 1.00 33.36 N
ATOM 20 N1 A A 2 -8.949 -2.386 7.430 1.00 33.03 N
ATOM 21 C2 A A 2 -9.414 -3.637 7.341 1.00 32.26 C
ATOM 22 N3 A A 2 -9.598 -4.520 8.318 1.00 33.21 N
ATOM 23 C4 A A 2 -9.244 -4.007 9.513 1.00 32.42 C
ATOM 24 P C A 3 -5.599 -8.288 12.001 1.00 35.78 P
ATOM 25 OP1 C A 3 -5.111 -9.636 12.361 1.00 36.16 O
ATOM 26 OP2 C A 3 -4.979 -7.099 12.630 1.00 34.52 O
ATOM 27 O5' C A 3 -5.552 -8.039 10.422 1.00 33.94 O
TER
ATOM 1 P G B 1 -8.998 1.012 17.646 1.00 33.71 P
ATOM 2 OP1 G B 1 -8.055 0.767 18.767 1.00 32.46 O
ATOM 3 OP2 G B 1 -8.590 1.853 16.488 1.00 31.70 O
ATOM 4 O5' G B 1 -9.485 -0.385 17.034 1.00 32.68 O
ATOM 5 C5' G B 1 -10.031 -1.405 17.855 1.00 34.16 C
ATOM 6 C4' G B 1 -10.700 -2.445 16.972 1.00 34.33 C
ATOM 7 O4' G B 1 -11.742 -1.837 16.177 1.00 34.13 O
ATOM 8 C3' G B 1 -9.797 -3.097 15.932 1.00 34.74 C
ATOM 9 O3' G B 1 -9.022 -4.128 16.508 1.00 35.56 O
ATOM 10 C2' G B 1 -10.805 -3.630 14.922 1.00 34.92 C
ATOM 11 O2' G B 1 -11.399 -4.850 15.311 1.00 35.24 O
ATOM 12 C1' G B 1 -11.810 -2.474 14.906 1.00 33.90 C
ATOM 13 N9 G B 1 -11.522 -1.487 13.870 1.00 33.64 N
ATOM 14 C8 G B 1 -10.982 -0.227 14.035 1.00 33.70 C
ATOM 15 N7 G B 1 -10.827 0.430 12.923 1.00 33.63 N
ATOM 16 C5 G B 1 -11.288 -0.449 11.947 1.00 33.33 C
ATOM 17 C6 G B 1 -11.360 -0.296 10.541 1.00 33.72 C
ATOM 18 O6 G B 1 -11.032 0.682 9.849 1.00 32.88 O
ATOM 19 N1 G B 1 -11.882 -1.424 9.919 1.00 33.38 N
ATOM 20 C2 G B 1 -12.279 -2.566 10.583 1.00 33.51 C
ATOM 21 N2 G B 1 -12.763 -3.555 9.829 1.00 34.07 N
ATOM 22 N3 G B 1 -12.210 -2.730 11.897 1.00 33.17 N
ATOM 23 C4 G B 1 -11.711 -1.633 12.513 1.00 33.51 C
ATOM 24 P A B 2 -7.647 -4.598 15.825 1.00 36.34 P
ATOM 25 OP1 A B 2 -7.066 -5.636 16.714 1.00 37.44 O
ATOM 26 OP2 A B 2 -6.863 -3.401 15.490 1.00 35.72 O
ATOM 27 O5' A B 2 -8.086 -5.290 14.450 1.00 36.01 O
TER
ATOM 2 P A A 2 -7.647 -4.598 15.825 1.00 36.34 P
ATOM 3 OP1 A A 2 -7.066 -5.636 16.714 1.00 37.44 O
ATOM 4 OP2 A A 2 -6.863 -3.401 15.490 1.00 35.72 O
ATOM 5 O5' A A 2 -8.086 -5.290 14.450 1.00 36.01 O
ATOM 6 C5' A A 2 -8.687 -6.584 14.464 1.00 34.58 C
ATOM 7 C4' A A 2 -9.091 -7.011 13.063 1.00 34.02 C
ATOM 8 O4' A A 2 -10.028 -6.075 12.446 1.00 31.58 O
ATOM 9 C3' A A 2 -7.920 -7.079 12.102 1.00 33.11 C
ATOM 10 O3' A A 2 -7.174 -8.281 12.286 1.00 33.31 O
ATOM 11 C2' A A 2 -8.656 -7.020 10.768 1.00 33.19 C
ATOM 12 O2' A A 2 -9.202 -8.279 10.392 1.00 31.87 O
ATOM 13 C1' A A 2 -9.735 -5.977 11.060 1.00 32.89 C
ATOM 14 N9 A A 2 -9.297 -4.613 10.746 1.00 32.65 N
ATOM 15 C8 A A 2 -8.821 -3.681 11.622 1.00 32.68 C
ATOM 16 N7 A A 2 -8.497 -2.540 11.080 1.00 30.93 N
ATOM 17 C5 A A 2 -8.761 -2.741 9.750 1.00 32.37 C
ATOM 18 C6 A A 2 -8.612 -1.892 8.643 1.00 32.51 C
ATOM 19 N6 A A 2 -8.155 -0.639 8.756 1.00 33.36 N
ATOM 20 N1 A A 2 -8.949 -2.386 7.430 1.00 33.03 N
ATOM 21 C2 A A 2 -9.414 -3.637 7.341 1.00 32.26 C
ATOM 22 N3 A A 2 -9.598 -4.520 8.318 1.00 33.21 N
ATOM 23 C4 A A 2 -9.244 -4.007 9.513 1.00 32.42 C
ATOM 24 P C A 3 -5.599 -8.288 12.001 1.00 35.78 P
ATOM 25 OP1 C A 3 -5.111 -9.636 12.361 1.00 36.16 O
ATOM 26 OP2 C A 3 -4.979 -7.099 12.630 1.00 34.52 O
ATOM 27 O5' C A 3 -5.552 -8.039 10.422 1.00 33.94 O
TER
ATOM 1 P G B 1 -8.998 1.012 17.646 1.00 33.71 P
ATOM 2 OP1 G B 1 -8.055 0.767 18.767 1.00 32.46 O
ATOM 3 OP2 G B 1 -8.590 1.853 16.488 1.00 31.70 O
ATOM 4 O5' G B 1 -9.485 -0.385 17.034 1.00 32.68 O
ATOM 5 C5' G B 1 -10.031 -1.405 17.855 1.00 34.16 C
ATOM 6 C4' G B 1 -10.700 -2.445 16.972 1.00 34.33 C
ATOM 7 O4' G B 1 -11.742 -1.837 16.177 1.00 34.13 O
ATOM 8 C3' G B 1 -9.797 -3.097 15.932 1.00 34.74 C
ATOM 9 O3' G B 1 -9.022 -4.128 16.508 1.00 35.56 O
ATOM 10 C2' G B 1 -10.805 -3.630 14.922 1.00 34.92 C
ATOM 11 O2' G B 1 -11.399 -4.850 15.311 1.00 35.24 O
ATOM 12 C1' G B 1 -11.810 -2.474 14.906 1.00 33.90 C
ATOM 13 N9 G B 1 -11.522 -1.487 13.870 1.00 33.64 N
ATOM 14 C8 G B 1 -10.982 -0.227 14.035 1.00 33.70 C
ATOM 15 N7 G B 1 -10.827 0.430 12.923 1.00 33.63 N
ATOM 16 C5 G B 1 -11.288 -0.449 11.947 1.00 33.33 C
ATOM 17 C6 G B 1 -11.360 -0.296 10.541 1.00 33.72 C
ATOM 18 O6 G B 1 -11.032 0.682 9.849 1.00 32.88 O
ATOM 19 N1 G B 1 -11.882 -1.424 9.919 1.00 33.38 N
ATOM 20 C2 G B 1 -12.279 -2.566 10.583 1.00 33.51 C
ATOM 21 N2 G B 1 -12.763 -3.555 9.829 1.00 34.07 N
ATOM 22 N3 G B 1 -12.210 -2.730 11.897 1.00 33.17 N
ATOM 23 C4 G B 1 -11.711 -1.633 12.513 1.00 33.51 C
ATOM 24 P A B 2 -7.647 -4.598 15.825 1.00 36.34 P
ATOM 25 OP1 A B 2 -7.066 -5.636 16.714 1.00 37.44 O
ATOM 26 OP2 A B 2 -6.863 -3.401 15.490 1.00 35.72 O
ATOM 27 O5' A B 2 -8.086 -5.290 14.450 1.00 36.01 O
TER
Atoms:
OP1: (-7.066,-5.636,16.714)
OP2: (-6.863,-3.401,15.490)
C3': (-7.920,-7.079,12.102)
C1': (-9.735,-5.977,11.060)
C5': (-8.687,-6.584,14.464)
O4': (-10.028,-6.075,12.446)
C8: (-8.821,-3.681,11.622)
O2': (-9.202,-8.279,10.392)
C6: (-8.612,-1.892,8.643)
C5: (-8.761,-2.741,9.750)
C4: (-9.244,-4.007,9.513)
P: (-7.647,-4.598,15.825)
C4': (-9.091,-7.011,13.063)
C2': (-8.656,-7.020,10.768)
C2: (-9.414,-3.637,7.341)
N1: (-8.949,-2.386,7.430)
N3: (-9.598,-4.520,8.318)
N6: (-8.155,-0.639,8.756)
N7: (-8.497,-2.540,11.080)
N9: (-9.297,-4.613,10.746)
O5': (-8.086,-5.290,14.450)
O3': (-7.174,-8.281,12.286)
OP2: (-6.863,-3.401,15.490)
C3': (-7.920,-7.079,12.102)
C1': (-9.735,-5.977,11.060)
C5': (-8.687,-6.584,14.464)
O4': (-10.028,-6.075,12.446)
C8: (-8.821,-3.681,11.622)
O2': (-9.202,-8.279,10.392)
C6: (-8.612,-1.892,8.643)
C5: (-8.761,-2.741,9.750)
C4: (-9.244,-4.007,9.513)
P: (-7.647,-4.598,15.825)
C4': (-9.091,-7.011,13.063)
C2': (-8.656,-7.020,10.768)
C2: (-9.414,-3.637,7.341)
N1: (-8.949,-2.386,7.430)
N3: (-9.598,-4.520,8.318)
N6: (-8.155,-0.639,8.756)
N7: (-8.497,-2.540,11.080)
N9: (-9.297,-4.613,10.746)
O5': (-8.086,-5.290,14.450)
O3': (-7.174,-8.281,12.286)
OP1: (-8.055,0.767,18.767)
OP2: (-8.590,1.853,16.488)
C3': (-9.797,-3.097,15.932)
C1': (-11.810,-2.474,14.906)
C5': (-10.031,-1.405,17.855)
O6: (-11.032,0.682,9.849)
O4': (-11.742,-1.837,16.177)
C8: (-10.982,-0.227,14.035)
C2: (-12.279,-2.566,10.583)
C6: (-11.360,-0.296,10.541)
C5: (-11.288,-0.449,11.947)
C4: (-11.711,-1.633,12.513)
P: (-8.998,1.012,17.646)
C4': (-10.700,-2.445,16.972)
C2': (-10.805,-3.630,14.922)
O2': (-11.399,-4.850,15.311)
N1: (-11.882,-1.424,9.919)
N2: (-12.763,-3.555,9.829)
N3: (-12.210,-2.730,11.897)
N7: (-10.827,0.430,12.923)
N9: (-11.522,-1.487,13.870)
O5': (-9.485,-0.385,17.034)
O3': (-9.022,-4.128,16.508)
OP2: (-8.590,1.853,16.488)
C3': (-9.797,-3.097,15.932)
C1': (-11.810,-2.474,14.906)
C5': (-10.031,-1.405,17.855)
O6: (-11.032,0.682,9.849)
O4': (-11.742,-1.837,16.177)
C8: (-10.982,-0.227,14.035)
C2: (-12.279,-2.566,10.583)
C6: (-11.360,-0.296,10.541)
C5: (-11.288,-0.449,11.947)
C4: (-11.711,-1.633,12.513)
P: (-8.998,1.012,17.646)
C4': (-10.700,-2.445,16.972)
C2': (-10.805,-3.630,14.922)
O2': (-11.399,-4.850,15.311)
N1: (-11.882,-1.424,9.919)
N2: (-12.763,-3.555,9.829)
N3: (-12.210,-2.730,11.897)
N7: (-10.827,0.430,12.923)
N9: (-11.522,-1.487,13.870)
O5': (-9.485,-0.385,17.034)
O3': (-9.022,-4.128,16.508)
Image (generated by PyMOL):