Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D0X:A117:A116
Extra
PDB:
ATOM 1 O3' G A 116 -3.950 37.663 22.687 1.00 74.04 O
ATOM 2 P A A 117 -4.374 37.321 21.184 1.00 84.36 P
ATOM 3 OP1 A A 117 -5.828 37.045 21.166 1.00 86.25 O
ATOM 4 OP2 A A 117 -3.428 36.303 20.674 1.00 77.64 O
ATOM 5 O5' A A 117 -4.110 38.700 20.417 1.00 70.47 O
ATOM 6 C5' A A 117 -4.885 39.841 20.749 1.00 69.52 C
ATOM 7 C4' A A 117 -4.439 41.047 19.948 1.00 70.20 C
ATOM 8 O4' A A 117 -3.191 41.554 20.484 1.00 77.19 O
ATOM 9 C3' A A 117 -4.127 40.769 18.486 1.00 67.29 C
ATOM 10 O3' A A 117 -5.291 40.828 17.694 1.00 73.43 O
ATOM 11 C2' A A 117 -3.194 41.928 18.176 1.00 70.66 C
ATOM 12 O2' A A 117 -3.870 43.167 18.127 1.00 67.88 O
ATOM 13 C1' A A 117 -2.314 41.846 19.412 1.00 77.12 C
ATOM 14 N9 A A 117 -1.340 40.766 19.305 1.00 80.88 N
ATOM 15 C8 A A 117 -1.450 39.499 19.809 1.00 81.62 C
ATOM 16 N7 A A 117 -0.418 38.729 19.555 1.00 80.05 N
ATOM 17 C5 A A 117 0.426 39.548 18.829 1.00 74.63 C
ATOM 18 C6 A A 117 1.692 39.323 18.261 1.00 71.71 C
ATOM 19 N6 A A 117 2.336 38.155 18.348 1.00 65.98 N
ATOM 20 N1 A A 117 2.263 40.352 17.602 1.00 76.30 N
ATOM 21 C2 A A 117 1.605 41.518 17.522 1.00 76.64 C
ATOM 22 N3 A A 117 0.412 41.848 18.014 1.00 68.97 N
ATOM 23 C4 A A 117 -0.126 40.806 18.663 1.00 74.41 C
ATOM 24 P G A 118 -5.373 39.893 16.401 1.00 84.36 P
ATOM 25 OP1 G A 118 -6.772 39.914 15.916 1.00 87.36 O
ATOM 26 OP2 G A 118 -4.718 38.608 16.741 1.00 70.45 O
ATOM 27 O5' G A 118 -4.454 40.656 15.338 1.00 68.69 O
TER
ATOM 1 O3' U B 115 -0.117 34.018 25.913 1.00 80.72 O
ATOM 2 P G B 116 -0.842 33.773 24.506 1.00 77.63 P
ATOM 3 OP1 G B 116 -2.035 32.943 24.778 1.00 74.70 O
ATOM 4 OP2 G B 116 0.175 33.302 23.539 1.00 69.83 O
ATOM 5 O5' G B 116 -1.319 35.240 24.070 1.00 66.81 O
ATOM 6 C5' G B 116 -2.299 35.911 24.849 1.00 69.37 C
ATOM 7 C4' G B 116 -2.390 37.386 24.504 1.00 71.72 C
ATOM 8 O4' G B 116 -1.162 38.062 24.878 1.00 73.54 O
ATOM 9 C3' G B 116 -2.575 37.697 23.028 1.00 73.09 C
ATOM 10 O3' G B 116 -3.950 37.663 22.687 1.00 74.04 O
ATOM 11 C2' G B 116 -2.022 39.115 22.938 1.00 75.51 C
ATOM 12 O2' G B 116 -2.962 40.097 23.329 1.00 72.27 O
ATOM 13 C1' G B 116 -0.854 39.057 23.919 1.00 76.64 C
ATOM 14 N9 G B 116 0.413 38.711 23.275 1.00 79.63 N
ATOM 15 C8 G B 116 1.063 37.501 23.303 1.00 79.43 C
ATOM 16 N7 G B 116 2.181 37.490 22.630 1.00 78.03 N
ATOM 17 C5 G B 116 2.280 38.777 22.117 1.00 79.17 C
ATOM 18 C6 G B 116 3.280 39.364 21.304 1.00 78.74 C
ATOM 19 O6 G B 116 4.316 38.847 20.858 1.00 74.84 O
ATOM 20 N1 G B 116 2.989 40.694 21.012 1.00 75.55 N
ATOM 21 C2 G B 116 1.873 41.365 21.450 1.00 77.56 C
ATOM 22 N2 G B 116 1.758 42.644 21.068 1.00 83.47 N
ATOM 23 N3 G B 116 0.930 40.829 22.212 1.00 76.72 N
ATOM 24 C4 G B 116 1.199 39.537 22.505 1.00 76.46 C
ATOM 25 P A B 117 -4.374 37.321 21.184 1.00 84.36 P
ATOM 26 OP1 A B 117 -5.828 37.045 21.166 1.00 86.25 O
ATOM 27 OP2 A B 117 -3.428 36.303 20.674 1.00 77.64 O
ATOM 28 O5' A B 117 -4.110 38.700 20.417 1.00 70.47 O
TER
ATOM 2 P A A 117 -4.374 37.321 21.184 1.00 84.36 P
ATOM 3 OP1 A A 117 -5.828 37.045 21.166 1.00 86.25 O
ATOM 4 OP2 A A 117 -3.428 36.303 20.674 1.00 77.64 O
ATOM 5 O5' A A 117 -4.110 38.700 20.417 1.00 70.47 O
ATOM 6 C5' A A 117 -4.885 39.841 20.749 1.00 69.52 C
ATOM 7 C4' A A 117 -4.439 41.047 19.948 1.00 70.20 C
ATOM 8 O4' A A 117 -3.191 41.554 20.484 1.00 77.19 O
ATOM 9 C3' A A 117 -4.127 40.769 18.486 1.00 67.29 C
ATOM 10 O3' A A 117 -5.291 40.828 17.694 1.00 73.43 O
ATOM 11 C2' A A 117 -3.194 41.928 18.176 1.00 70.66 C
ATOM 12 O2' A A 117 -3.870 43.167 18.127 1.00 67.88 O
ATOM 13 C1' A A 117 -2.314 41.846 19.412 1.00 77.12 C
ATOM 14 N9 A A 117 -1.340 40.766 19.305 1.00 80.88 N
ATOM 15 C8 A A 117 -1.450 39.499 19.809 1.00 81.62 C
ATOM 16 N7 A A 117 -0.418 38.729 19.555 1.00 80.05 N
ATOM 17 C5 A A 117 0.426 39.548 18.829 1.00 74.63 C
ATOM 18 C6 A A 117 1.692 39.323 18.261 1.00 71.71 C
ATOM 19 N6 A A 117 2.336 38.155 18.348 1.00 65.98 N
ATOM 20 N1 A A 117 2.263 40.352 17.602 1.00 76.30 N
ATOM 21 C2 A A 117 1.605 41.518 17.522 1.00 76.64 C
ATOM 22 N3 A A 117 0.412 41.848 18.014 1.00 68.97 N
ATOM 23 C4 A A 117 -0.126 40.806 18.663 1.00 74.41 C
ATOM 24 P G A 118 -5.373 39.893 16.401 1.00 84.36 P
ATOM 25 OP1 G A 118 -6.772 39.914 15.916 1.00 87.36 O
ATOM 26 OP2 G A 118 -4.718 38.608 16.741 1.00 70.45 O
ATOM 27 O5' G A 118 -4.454 40.656 15.338 1.00 68.69 O
TER
ATOM 1 O3' U B 115 -0.117 34.018 25.913 1.00 80.72 O
ATOM 2 P G B 116 -0.842 33.773 24.506 1.00 77.63 P
ATOM 3 OP1 G B 116 -2.035 32.943 24.778 1.00 74.70 O
ATOM 4 OP2 G B 116 0.175 33.302 23.539 1.00 69.83 O
ATOM 5 O5' G B 116 -1.319 35.240 24.070 1.00 66.81 O
ATOM 6 C5' G B 116 -2.299 35.911 24.849 1.00 69.37 C
ATOM 7 C4' G B 116 -2.390 37.386 24.504 1.00 71.72 C
ATOM 8 O4' G B 116 -1.162 38.062 24.878 1.00 73.54 O
ATOM 9 C3' G B 116 -2.575 37.697 23.028 1.00 73.09 C
ATOM 10 O3' G B 116 -3.950 37.663 22.687 1.00 74.04 O
ATOM 11 C2' G B 116 -2.022 39.115 22.938 1.00 75.51 C
ATOM 12 O2' G B 116 -2.962 40.097 23.329 1.00 72.27 O
ATOM 13 C1' G B 116 -0.854 39.057 23.919 1.00 76.64 C
ATOM 14 N9 G B 116 0.413 38.711 23.275 1.00 79.63 N
ATOM 15 C8 G B 116 1.063 37.501 23.303 1.00 79.43 C
ATOM 16 N7 G B 116 2.181 37.490 22.630 1.00 78.03 N
ATOM 17 C5 G B 116 2.280 38.777 22.117 1.00 79.17 C
ATOM 18 C6 G B 116 3.280 39.364 21.304 1.00 78.74 C
ATOM 19 O6 G B 116 4.316 38.847 20.858 1.00 74.84 O
ATOM 20 N1 G B 116 2.989 40.694 21.012 1.00 75.55 N
ATOM 21 C2 G B 116 1.873 41.365 21.450 1.00 77.56 C
ATOM 22 N2 G B 116 1.758 42.644 21.068 1.00 83.47 N
ATOM 23 N3 G B 116 0.930 40.829 22.212 1.00 76.72 N
ATOM 24 C4 G B 116 1.199 39.537 22.505 1.00 76.46 C
ATOM 25 P A B 117 -4.374 37.321 21.184 1.00 84.36 P
ATOM 26 OP1 A B 117 -5.828 37.045 21.166 1.00 86.25 O
ATOM 27 OP2 A B 117 -3.428 36.303 20.674 1.00 77.64 O
ATOM 28 O5' A B 117 -4.110 38.700 20.417 1.00 70.47 O
TER
Atoms:
OP1: (-5.828,37.045,21.166)
OP2: (-3.428,36.303,20.674)
C3': (-4.127,40.769,18.486)
C1': (-2.314,41.846,19.412)
C5': (-4.885,39.841,20.749)
O4': (-3.191,41.554,20.484)
C8: (-1.450,39.499,19.809)
O2': (-3.870,43.167,18.127)
C6: (1.692,39.323,18.261)
C5: (0.426,39.548,18.829)
C4: (-0.126,40.806,18.663)
P: (-4.374,37.321,21.184)
C4': (-4.439,41.047,19.948)
C2': (-3.194,41.928,18.176)
C2: (1.605,41.518,17.522)
N1: (2.263,40.352,17.602)
N3: (0.412,41.848,18.014)
N6: (2.336,38.155,18.348)
N7: (-0.418,38.729,19.555)
N9: (-1.340,40.766,19.305)
O5': (-4.110,38.700,20.417)
O3': (-5.291,40.828,17.694)
OP2: (-3.428,36.303,20.674)
C3': (-4.127,40.769,18.486)
C1': (-2.314,41.846,19.412)
C5': (-4.885,39.841,20.749)
O4': (-3.191,41.554,20.484)
C8: (-1.450,39.499,19.809)
O2': (-3.870,43.167,18.127)
C6: (1.692,39.323,18.261)
C5: (0.426,39.548,18.829)
C4: (-0.126,40.806,18.663)
P: (-4.374,37.321,21.184)
C4': (-4.439,41.047,19.948)
C2': (-3.194,41.928,18.176)
C2: (1.605,41.518,17.522)
N1: (2.263,40.352,17.602)
N3: (0.412,41.848,18.014)
N6: (2.336,38.155,18.348)
N7: (-0.418,38.729,19.555)
N9: (-1.340,40.766,19.305)
O5': (-4.110,38.700,20.417)
O3': (-5.291,40.828,17.694)
OP1: (-2.035,32.943,24.778)
OP2: (0.175,33.302,23.539)
C3': (-2.575,37.697,23.028)
C1': (-0.854,39.057,23.919)
C5': (-2.299,35.911,24.849)
O6: (4.316,38.847,20.858)
O4': (-1.162,38.062,24.878)
C8: (1.063,37.501,23.303)
C2: (1.873,41.365,21.450)
C6: (3.280,39.364,21.304)
C5: (2.280,38.777,22.117)
C4: (1.199,39.537,22.505)
P: (-0.842,33.773,24.506)
C4': (-2.390,37.386,24.504)
C2': (-2.022,39.115,22.938)
O2': (-2.962,40.097,23.329)
N1: (2.989,40.694,21.012)
N2: (1.758,42.644,21.068)
N3: (0.930,40.829,22.212)
N7: (2.181,37.490,22.630)
N9: (0.413,38.711,23.275)
O5': (-1.319,35.240,24.070)
O3': (-3.950,37.663,22.687)
OP2: (0.175,33.302,23.539)
C3': (-2.575,37.697,23.028)
C1': (-0.854,39.057,23.919)
C5': (-2.299,35.911,24.849)
O6: (4.316,38.847,20.858)
O4': (-1.162,38.062,24.878)
C8: (1.063,37.501,23.303)
C2: (1.873,41.365,21.450)
C6: (3.280,39.364,21.304)
C5: (2.280,38.777,22.117)
C4: (1.199,39.537,22.505)
P: (-0.842,33.773,24.506)
C4': (-2.390,37.386,24.504)
C2': (-2.022,39.115,22.938)
O2': (-2.962,40.097,23.329)
N1: (2.989,40.694,21.012)
N2: (1.758,42.644,21.068)
N3: (0.930,40.829,22.212)
N7: (2.181,37.490,22.630)
N9: (0.413,38.711,23.275)
O5': (-1.319,35.240,24.070)
O3': (-3.950,37.663,22.687)
Image (generated by PyMOL):