Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0106:0117
Extra
PDB:
ATOM 1 O3' U A 105 82.019 149.499 28.570 1.00 46.56 O
ATOM 2 P G A 106 82.149 151.061 28.237 1.00 47.39 P
ATOM 3 OP1 G A 106 81.140 151.841 29.010 1.00 47.61 O
ATOM 4 OP2 G A 106 82.164 151.146 26.754 1.00 48.95 O
ATOM 5 O5' G A 106 83.589 151.436 28.799 1.00 43.92 O
ATOM 6 C5' G A 106 84.768 150.823 28.265 1.00 42.91 C
ATOM 7 C4' G A 106 85.978 151.604 28.689 1.00 42.89 C
ATOM 8 O4' G A 106 85.806 152.982 28.270 1.00 43.08 O
ATOM 9 C3' G A 106 86.183 151.674 30.190 1.00 42.01 C
ATOM 10 O3' G A 106 86.948 150.554 30.609 1.00 43.67 O
ATOM 11 C2' G A 106 86.927 152.992 30.352 1.00 41.84 C
ATOM 12 O2' G A 106 88.282 152.877 29.969 1.00 40.96 O
ATOM 13 C1' G A 106 86.225 153.856 29.305 1.00 40.34 C
ATOM 14 N9 G A 106 85.045 154.586 29.764 1.00 38.66 N
ATOM 15 C8 G A 106 83.740 154.318 29.421 1.00 38.83 C
ATOM 16 N7 G A 106 82.891 155.169 29.925 1.00 39.31 N
ATOM 17 C5 G A 106 83.677 156.045 30.658 1.00 36.97 C
ATOM 18 C6 G A 106 83.310 157.172 31.417 1.00 36.88 C
ATOM 19 O6 G A 106 82.181 157.639 31.600 1.00 38.97 O
ATOM 20 N1 G A 106 84.413 157.774 32.002 1.00 35.97 N
ATOM 21 C2 G A 106 85.705 157.343 31.872 1.00 36.55 C
ATOM 22 N2 G A 106 86.624 158.058 32.521 1.00 36.66 N
ATOM 23 N3 G A 106 86.067 156.289 31.162 1.00 36.43 N
ATOM 24 C4 G A 106 85.008 155.691 30.584 1.00 37.00 C
ATOM 25 P A A 107 86.870 150.050 32.131 1.00 45.71 P
ATOM 26 OP1 A A 107 87.918 149.003 32.263 1.00 42.89 O
ATOM 27 OP2 A A 107 85.462 149.732 32.467 1.00 47.01 O
ATOM 28 O5' A A 107 87.293 151.316 33.001 1.00 44.77 O
TER
ATOM 1 P A B 117 84.505 156.359 20.725 1.00 84.68 P
ATOM 2 OP1 A B 117 84.521 155.682 19.396 1.00 82.22 O
ATOM 3 OP2 A B 117 83.272 157.067 21.179 1.00 83.86 O
ATOM 4 O5' A B 117 84.849 155.287 21.847 1.00 80.59 O
ATOM 5 C5' A B 117 86.066 154.518 21.785 1.00 72.66 C
ATOM 6 C4' A B 117 86.115 153.544 22.934 1.00 66.72 C
ATOM 7 O4' A B 117 86.499 154.229 24.161 1.00 62.86 O
ATOM 8 C3' A B 117 84.775 152.909 23.273 1.00 64.38 C
ATOM 9 O3' A B 117 84.273 151.972 22.297 1.00 62.12 O
ATOM 10 C2' A B 117 84.957 152.505 24.733 1.00 61.52 C
ATOM 11 O2' A B 117 85.678 151.314 24.945 1.00 60.25 O
ATOM 12 C1' A B 117 85.771 153.693 25.261 1.00 58.70 C
ATOM 13 N9 A B 117 84.947 154.761 25.842 1.00 52.79 N
ATOM 14 C8 A B 117 83.592 154.939 25.703 1.00 50.74 C
ATOM 15 N7 A B 117 83.119 155.962 26.369 1.00 49.49 N
ATOM 16 C5 A B 117 84.236 156.507 26.981 1.00 47.28 C
ATOM 17 C6 A B 117 84.394 157.609 27.836 1.00 46.67 C
ATOM 18 N6 A B 117 83.384 158.382 28.235 1.00 44.39 N
ATOM 19 N1 A B 117 85.639 157.890 28.277 1.00 47.24 N
ATOM 20 C2 A B 117 86.652 157.102 27.878 1.00 49.02 C
ATOM 21 N3 A B 117 86.628 156.033 27.078 1.00 49.36 N
ATOM 22 C4 A B 117 85.373 155.784 26.660 1.00 49.76 C
ATOM 23 P C B 118 85.101 150.648 21.905 1.00 62.05 P
ATOM 24 OP1 C B 118 86.353 150.573 22.705 1.00 63.44 O
ATOM 25 OP2 C B 118 85.189 150.611 20.426 1.00 62.06 O
ATOM 26 O5' C B 118 84.132 149.456 22.326 1.00 61.56 O
TER
ATOM 2 P G A 106 82.149 151.061 28.237 1.00 47.39 P
ATOM 3 OP1 G A 106 81.140 151.841 29.010 1.00 47.61 O
ATOM 4 OP2 G A 106 82.164 151.146 26.754 1.00 48.95 O
ATOM 5 O5' G A 106 83.589 151.436 28.799 1.00 43.92 O
ATOM 6 C5' G A 106 84.768 150.823 28.265 1.00 42.91 C
ATOM 7 C4' G A 106 85.978 151.604 28.689 1.00 42.89 C
ATOM 8 O4' G A 106 85.806 152.982 28.270 1.00 43.08 O
ATOM 9 C3' G A 106 86.183 151.674 30.190 1.00 42.01 C
ATOM 10 O3' G A 106 86.948 150.554 30.609 1.00 43.67 O
ATOM 11 C2' G A 106 86.927 152.992 30.352 1.00 41.84 C
ATOM 12 O2' G A 106 88.282 152.877 29.969 1.00 40.96 O
ATOM 13 C1' G A 106 86.225 153.856 29.305 1.00 40.34 C
ATOM 14 N9 G A 106 85.045 154.586 29.764 1.00 38.66 N
ATOM 15 C8 G A 106 83.740 154.318 29.421 1.00 38.83 C
ATOM 16 N7 G A 106 82.891 155.169 29.925 1.00 39.31 N
ATOM 17 C5 G A 106 83.677 156.045 30.658 1.00 36.97 C
ATOM 18 C6 G A 106 83.310 157.172 31.417 1.00 36.88 C
ATOM 19 O6 G A 106 82.181 157.639 31.600 1.00 38.97 O
ATOM 20 N1 G A 106 84.413 157.774 32.002 1.00 35.97 N
ATOM 21 C2 G A 106 85.705 157.343 31.872 1.00 36.55 C
ATOM 22 N2 G A 106 86.624 158.058 32.521 1.00 36.66 N
ATOM 23 N3 G A 106 86.067 156.289 31.162 1.00 36.43 N
ATOM 24 C4 G A 106 85.008 155.691 30.584 1.00 37.00 C
ATOM 25 P A A 107 86.870 150.050 32.131 1.00 45.71 P
ATOM 26 OP1 A A 107 87.918 149.003 32.263 1.00 42.89 O
ATOM 27 OP2 A A 107 85.462 149.732 32.467 1.00 47.01 O
ATOM 28 O5' A A 107 87.293 151.316 33.001 1.00 44.77 O
TER
ATOM 1 P A B 117 84.505 156.359 20.725 1.00 84.68 P
ATOM 2 OP1 A B 117 84.521 155.682 19.396 1.00 82.22 O
ATOM 3 OP2 A B 117 83.272 157.067 21.179 1.00 83.86 O
ATOM 4 O5' A B 117 84.849 155.287 21.847 1.00 80.59 O
ATOM 5 C5' A B 117 86.066 154.518 21.785 1.00 72.66 C
ATOM 6 C4' A B 117 86.115 153.544 22.934 1.00 66.72 C
ATOM 7 O4' A B 117 86.499 154.229 24.161 1.00 62.86 O
ATOM 8 C3' A B 117 84.775 152.909 23.273 1.00 64.38 C
ATOM 9 O3' A B 117 84.273 151.972 22.297 1.00 62.12 O
ATOM 10 C2' A B 117 84.957 152.505 24.733 1.00 61.52 C
ATOM 11 O2' A B 117 85.678 151.314 24.945 1.00 60.25 O
ATOM 12 C1' A B 117 85.771 153.693 25.261 1.00 58.70 C
ATOM 13 N9 A B 117 84.947 154.761 25.842 1.00 52.79 N
ATOM 14 C8 A B 117 83.592 154.939 25.703 1.00 50.74 C
ATOM 15 N7 A B 117 83.119 155.962 26.369 1.00 49.49 N
ATOM 16 C5 A B 117 84.236 156.507 26.981 1.00 47.28 C
ATOM 17 C6 A B 117 84.394 157.609 27.836 1.00 46.67 C
ATOM 18 N6 A B 117 83.384 158.382 28.235 1.00 44.39 N
ATOM 19 N1 A B 117 85.639 157.890 28.277 1.00 47.24 N
ATOM 20 C2 A B 117 86.652 157.102 27.878 1.00 49.02 C
ATOM 21 N3 A B 117 86.628 156.033 27.078 1.00 49.36 N
ATOM 22 C4 A B 117 85.373 155.784 26.660 1.00 49.76 C
ATOM 23 P C B 118 85.101 150.648 21.905 1.00 62.05 P
ATOM 24 OP1 C B 118 86.353 150.573 22.705 1.00 63.44 O
ATOM 25 OP2 C B 118 85.189 150.611 20.426 1.00 62.06 O
ATOM 26 O5' C B 118 84.132 149.456 22.326 1.00 61.56 O
TER
Atoms:
OP1: (81.140,151.841,29.010)
OP2: (82.164,151.146,26.754)
C3': (86.183,151.674,30.190)
C1': (86.225,153.856,29.305)
C5': (84.768,150.823,28.265)
O6: (82.181,157.639,31.600)
O4': (85.806,152.982,28.270)
C8: (83.740,154.318,29.421)
C2: (85.705,157.343,31.872)
C6: (83.310,157.172,31.417)
C5: (83.677,156.045,30.658)
C4: (85.008,155.691,30.584)
P: (82.149,151.061,28.237)
C4': (85.978,151.604,28.689)
C2': (86.927,152.992,30.352)
O2': (88.282,152.877,29.969)
N1: (84.413,157.774,32.002)
N2: (86.624,158.058,32.521)
N3: (86.067,156.289,31.162)
N7: (82.891,155.169,29.925)
N9: (85.045,154.586,29.764)
O5': (83.589,151.436,28.799)
O3': (86.948,150.554,30.609)
OP2: (82.164,151.146,26.754)
C3': (86.183,151.674,30.190)
C1': (86.225,153.856,29.305)
C5': (84.768,150.823,28.265)
O6: (82.181,157.639,31.600)
O4': (85.806,152.982,28.270)
C8: (83.740,154.318,29.421)
C2: (85.705,157.343,31.872)
C6: (83.310,157.172,31.417)
C5: (83.677,156.045,30.658)
C4: (85.008,155.691,30.584)
P: (82.149,151.061,28.237)
C4': (85.978,151.604,28.689)
C2': (86.927,152.992,30.352)
O2': (88.282,152.877,29.969)
N1: (84.413,157.774,32.002)
N2: (86.624,158.058,32.521)
N3: (86.067,156.289,31.162)
N7: (82.891,155.169,29.925)
N9: (85.045,154.586,29.764)
O5': (83.589,151.436,28.799)
O3': (86.948,150.554,30.609)
OP1: (84.521,155.682,19.396)
OP2: (83.272,157.067,21.179)
C3': (84.775,152.909,23.273)
C1': (85.771,153.693,25.261)
C5': (86.066,154.518,21.785)
O4': (86.499,154.229,24.161)
C8: (83.592,154.939,25.703)
O2': (85.678,151.314,24.945)
C6: (84.394,157.609,27.836)
C5: (84.236,156.507,26.981)
C4: (85.373,155.784,26.660)
P: (84.505,156.359,20.725)
C4': (86.115,153.544,22.934)
C2': (84.957,152.505,24.733)
C2: (86.652,157.102,27.878)
N1: (85.639,157.890,28.277)
N3: (86.628,156.033,27.078)
N6: (83.384,158.382,28.235)
N7: (83.119,155.962,26.369)
N9: (84.947,154.761,25.842)
O5': (84.849,155.287,21.847)
O3': (84.273,151.972,22.297)
OP2: (83.272,157.067,21.179)
C3': (84.775,152.909,23.273)
C1': (85.771,153.693,25.261)
C5': (86.066,154.518,21.785)
O4': (86.499,154.229,24.161)
C8: (83.592,154.939,25.703)
O2': (85.678,151.314,24.945)
C6: (84.394,157.609,27.836)
C5: (84.236,156.507,26.981)
C4: (85.373,155.784,26.660)
P: (84.505,156.359,20.725)
C4': (86.115,153.544,22.934)
C2': (84.957,152.505,24.733)
C2: (86.652,157.102,27.878)
N1: (85.639,157.890,28.277)
N3: (86.628,156.033,27.078)
N6: (83.384,158.382,28.235)
N7: (83.119,155.962,26.369)
N9: (84.947,154.761,25.842)
O5': (84.849,155.287,21.847)
O3': (84.273,151.972,22.297)
Image (generated by PyMOL):