ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2JLT:B11:B10

Extra

PDB:
ATOM 1 O3' A A 10 -9.543 -37.083 -21.035 1.00 35.41 O
ATOM 2 P G A 11 -8.548 -38.242 -21.519 1.00 36.35 P
ATOM 3 OP1 G A 11 -9.328 -39.493 -21.511 1.00 36.14 O
ATOM 4 OP2 G A 11 -7.310 -38.169 -20.717 1.00 35.93 O
ATOM 5 O5' G A 11 -8.165 -37.833 -23.024 1.00 35.89 O
ATOM 6 C5' G A 11 -9.134 -37.837 -24.075 1.00 35.42 C
ATOM 7 C4' G A 11 -8.534 -37.224 -25.326 1.00 35.56 C
ATOM 8 O4' G A 11 -8.121 -35.856 -25.069 1.00 36.51 O
ATOM 9 C3' G A 11 -7.239 -37.858 -25.796 1.00 34.99 C
ATOM 10 O3' G A 11 -7.476 -39.026 -26.524 1.00 34.20 O
ATOM 11 C2' G A 11 -6.651 -36.754 -26.664 1.00 35.53 C
ATOM 12 O2' G A 11 -7.279 -36.627 -27.918 1.00 35.91 O
ATOM 13 C1' G A 11 -6.937 -35.539 -25.793 1.00 36.02 C
ATOM 14 N9 G A 11 -5.816 -35.325 -24.880 1.00 36.14 N
ATOM 15 C8 G A 11 -5.752 -35.714 -23.566 1.00 36.19 C
ATOM 16 N7 G A 11 -4.619 -35.418 -23.000 1.00 36.80 N
ATOM 17 C5 G A 11 -3.879 -34.801 -23.995 1.00 36.29 C
ATOM 18 C6 G A 11 -2.566 -34.267 -23.948 1.00 36.85 C
ATOM 19 O6 G A 11 -1.783 -34.240 -22.981 1.00 38.26 O
ATOM 20 N1 G A 11 -2.185 -33.727 -25.172 1.00 35.50 N
ATOM 21 C2 G A 11 -2.980 -33.719 -26.283 1.00 34.54 C
ATOM 22 N2 G A 11 -2.444 -33.164 -27.360 1.00 34.04 N
ATOM 23 N3 G A 11 -4.206 -34.212 -26.345 1.00 35.10 N
ATOM 24 C4 G A 11 -4.598 -34.738 -25.162 1.00 35.76 C
ATOM 25 P C A 12 -6.579 -40.302 -26.177 1.00 34.08 P
ATOM 26 OP1 C A 12 -7.398 -41.481 -26.513 1.00 33.81 O
ATOM 27 OP2 C A 12 -6.039 -40.144 -24.808 1.00 34.50 O
ATOM 28 O5' C A 12 -5.325 -40.211 -27.176 1.00 33.34 O
TER

ATOM 1 O3' G B 9 -7.907 -34.481 -15.712 1.00 31.20 O
ATOM 2 P A B 10 -7.527 -35.663 -16.729 1.00 32.68 P
ATOM 3 OP1 A B 10 -8.260 -36.867 -16.269 1.00 31.65 O
ATOM 4 OP2 A B 10 -6.053 -35.723 -16.844 1.00 31.70 O
ATOM 5 O5' A B 10 -8.146 -35.171 -18.129 1.00 32.73 O
ATOM 6 C5' A B 10 -9.535 -35.335 -18.381 1.00 32.98 C
ATOM 7 C4' A B 10 -9.869 -35.033 -19.821 1.00 33.71 C
ATOM 8 O4' A B 10 -9.550 -33.653 -20.106 1.00 34.38 O
ATOM 9 C3' A B 10 -9.048 -35.778 -20.847 1.00 34.50 C
ATOM 10 O3' A B 10 -9.543 -37.083 -21.035 1.00 35.41 O
ATOM 11 C2' A B 10 -9.328 -34.914 -22.060 1.00 34.83 C
ATOM 12 O2' A B 10 -10.615 -35.169 -22.575 1.00 35.48 O
ATOM 13 C1' A B 10 -9.223 -33.515 -21.470 1.00 34.87 C
ATOM 14 N9 A B 10 -7.854 -33.044 -21.580 1.00 35.71 N
ATOM 15 C8 A B 10 -6.916 -33.000 -20.591 1.00 36.28 C
ATOM 16 N7 A B 10 -5.752 -32.547 -20.988 1.00 37.00 N
ATOM 17 C5 A B 10 -5.931 -32.278 -22.335 1.00 37.11 C
ATOM 18 C6 A B 10 -5.072 -31.772 -23.344 1.00 37.18 C
ATOM 19 N6 A B 10 -3.798 -31.430 -23.147 1.00 37.50 N
ATOM 20 N1 A B 10 -5.570 -31.630 -24.587 1.00 37.06 N
ATOM 21 C2 A B 10 -6.850 -31.972 -24.794 1.00 36.99 C
ATOM 22 N3 A B 10 -7.753 -32.455 -23.935 1.00 36.25 N
ATOM 23 C4 A B 10 -7.227 -32.587 -22.711 1.00 36.35 C
ATOM 24 P G B 11 -8.548 -38.242 -21.519 1.00 36.35 P
ATOM 25 OP1 G B 11 -9.328 -39.493 -21.511 1.00 36.14 O
ATOM 26 OP2 G B 11 -7.310 -38.169 -20.717 1.00 35.93 O
ATOM 27 O5' G B 11 -8.165 -37.833 -23.024 1.00 35.89 O
TER

Atoms:
OP1: (-9.328,-39.493,-21.511)
OP2: (-7.310,-38.169,-20.717)
C3': (-7.239,-37.858,-25.796)
C1': (-6.937,-35.539,-25.793)
C5': (-9.134,-37.837,-24.075)
O6: (-1.783,-34.240,-22.981)
O4': (-8.121,-35.856,-25.069)
C8: (-5.752,-35.714,-23.566)
C2: (-2.980,-33.719,-26.283)
C6: (-2.566,-34.267,-23.948)
C5: (-3.879,-34.801,-23.995)
C4: (-4.598,-34.738,-25.162)
P: (-8.548,-38.242,-21.519)
C4': (-8.534,-37.224,-25.326)
C2': (-6.651,-36.754,-26.664)
O2': (-7.279,-36.627,-27.918)
N1: (-2.185,-33.727,-25.172)
N2: (-2.444,-33.164,-27.360)
N3: (-4.206,-34.212,-26.345)
N7: (-4.619,-35.418,-23.000)
N9: (-5.816,-35.325,-24.880)
O5': (-8.165,-37.833,-23.024)
O3': (-7.476,-39.026,-26.524)
OP1: (-8.260,-36.867,-16.269)
OP2: (-6.053,-35.723,-16.844)
C3': (-9.048,-35.778,-20.847)
C1': (-9.223,-33.515,-21.470)
C5': (-9.535,-35.335,-18.381)
O4': (-9.550,-33.653,-20.106)
C8: (-6.916,-33.000,-20.591)
O2': (-10.615,-35.169,-22.575)
C6: (-5.072,-31.772,-23.344)
C5: (-5.931,-32.278,-22.335)
C4: (-7.227,-32.587,-22.711)
P: (-7.527,-35.663,-16.729)
C4': (-9.869,-35.033,-19.821)
C2': (-9.328,-34.914,-22.060)
C2: (-6.850,-31.972,-24.794)
N1: (-5.570,-31.630,-24.587)
N3: (-7.753,-32.455,-23.935)
N6: (-3.798,-31.430,-23.147)
N7: (-5.752,-32.547,-20.988)
N9: (-7.854,-33.044,-21.580)
O5': (-8.146,-35.171,-18.129)
O3': (-9.543,-37.083,-21.035)
Image (generated by PyMOL):
PyMOL image
show in jmol