ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A360:A359

Extra

PDB:
ATOM 1 O3' A A 359 32.166 -72.501 -80.247 1.00 58.61 O
ATOM 2 P G A 360 33.170 -71.566 -81.060 1.00 65.42 P
ATOM 3 OP1 G A 360 32.405 -70.371 -81.480 1.00 75.21 O
ATOM 4 OP2 G A 360 33.816 -72.415 -82.100 1.00 70.14 O
ATOM 5 O5' G A 360 34.231 -71.160 -79.957 1.00 70.94 O
ATOM 6 C5' G A 360 33.808 -70.585 -78.731 1.00 70.83 C
ATOM 7 C4' G A 360 34.906 -70.602 -77.699 1.00 56.30 C
ATOM 8 O4' G A 360 35.132 -71.956 -77.236 1.00 56.59 O
ATOM 9 C3' G A 360 36.253 -70.164 -78.187 1.00 55.72 C
ATOM 10 O3' G A 360 36.385 -68.770 -78.248 1.00 54.90 O
ATOM 11 C2' G A 360 37.183 -70.817 -77.197 1.00 58.83 C
ATOM 12 O2' G A 360 37.154 -70.119 -75.980 1.00 58.53 O
ATOM 13 C1' G A 360 36.496 -72.156 -76.993 1.00 56.56 C
ATOM 14 N9 G A 360 36.994 -73.178 -77.935 1.00 69.35 N
ATOM 15 C8 G A 360 36.404 -73.626 -79.093 1.00 73.52 C
ATOM 16 N7 G A 360 37.115 -74.536 -79.705 1.00 77.75 N
ATOM 17 C5 G A 360 38.240 -74.703 -78.909 1.00 73.81 C
ATOM 18 C6 G A 360 39.370 -75.553 -79.052 1.00 73.85 C
ATOM 19 O6 G A 360 39.627 -76.371 -79.942 1.00 64.84 O
ATOM 20 N1 G A 360 40.269 -75.381 -78.012 1.00 68.81 N
ATOM 21 C2 G A 360 40.100 -74.514 -76.968 1.00 68.04 C
ATOM 22 N2 G A 360 41.066 -74.487 -76.049 1.00 62.27 N
ATOM 23 N3 G A 360 39.060 -73.727 -76.819 1.00 69.60 N
ATOM 24 C4 G A 360 38.175 -73.870 -77.818 1.00 70.60 C
ATOM 25 P G A 361 37.438 -68.135 -79.261 1.00 57.66 P
ATOM 26 OP1 G A 361 37.345 -66.666 -79.133 1.00 64.18 O
ATOM 27 OP2 G A 361 37.193 -68.754 -80.582 1.00 70.79 O
ATOM 28 O5' G A 361 38.825 -68.650 -78.678 1.00 63.07 O
TER

ATOM 1 O3' A B 358 31.338 -77.509 -84.306 1.00 63.77 O
ATOM 2 P A B 359 31.948 -76.085 -83.948 1.00 68.52 P
ATOM 3 OP1 A B 359 31.121 -75.063 -84.644 1.00100.96 O
ATOM 4 OP2 A B 359 33.397 -76.152 -84.243 1.00102.47 O
ATOM 5 O5' A B 359 31.709 -75.998 -82.391 1.00 60.93 O
ATOM 6 C5' A B 359 30.870 -75.007 -81.838 1.00 56.83 C
ATOM 7 C4' A B 359 31.209 -74.747 -80.391 1.00 66.92 C
ATOM 8 O4' A B 359 31.523 -75.996 -79.725 1.00 69.23 O
ATOM 9 C3' A B 359 32.433 -73.884 -80.130 1.00 67.44 C
ATOM 10 O3' A B 359 32.166 -72.501 -80.247 1.00 58.61 O
ATOM 11 C2' A B 359 32.830 -74.295 -78.729 1.00 63.43 C
ATOM 12 O2' A B 359 31.987 -73.672 -77.780 1.00 50.54 O
ATOM 13 C1' A B 359 32.511 -75.785 -78.747 1.00 59.94 C
ATOM 14 N9 A B 359 33.679 -76.588 -79.101 1.00 65.77 N
ATOM 15 C8 A B 359 33.917 -77.220 -80.283 1.00 78.27 C
ATOM 16 N7 A B 359 35.051 -77.868 -80.323 1.00 81.75 N
ATOM 17 C5 A B 359 35.593 -77.639 -79.070 1.00 85.56 C
ATOM 18 C6 A B 359 36.794 -78.057 -78.479 1.00 80.45 C
ATOM 19 N6 A B 359 37.693 -78.822 -79.089 1.00 81.32 N
ATOM 20 N1 A B 359 37.030 -77.655 -77.221 1.00 81.34 N
ATOM 21 C2 A B 359 36.113 -76.890 -76.610 1.00 81.70 C
ATOM 22 N3 A B 359 34.951 -76.428 -77.063 1.00 78.51 N
ATOM 23 C4 A B 359 34.750 -76.851 -78.312 1.00 78.67 C
ATOM 24 P G B 360 33.170 -71.566 -81.060 1.00 65.42 P
ATOM 25 OP1 G B 360 32.405 -70.371 -81.480 1.00 75.21 O
ATOM 26 OP2 G B 360 33.816 -72.415 -82.100 1.00 70.14 O
ATOM 27 O5' G B 360 34.231 -71.160 -79.957 1.00 70.94 O
TER

Atoms:
OP1: (32.405,-70.371,-81.480)
OP2: (33.816,-72.415,-82.100)
C3': (36.253,-70.164,-78.187)
C1': (36.496,-72.156,-76.993)
C5': (33.808,-70.585,-78.731)
O6: (39.627,-76.371,-79.942)
O4': (35.132,-71.956,-77.236)
C8: (36.404,-73.626,-79.093)
C2: (40.100,-74.514,-76.968)
C6: (39.370,-75.553,-79.052)
C5: (38.240,-74.703,-78.909)
C4: (38.175,-73.870,-77.818)
P: (33.170,-71.566,-81.060)
C4': (34.906,-70.602,-77.699)
C2': (37.183,-70.817,-77.197)
O2': (37.154,-70.119,-75.980)
N1: (40.269,-75.381,-78.012)
N2: (41.066,-74.487,-76.049)
N3: (39.060,-73.727,-76.819)
N7: (37.115,-74.536,-79.705)
N9: (36.994,-73.178,-77.935)
O5': (34.231,-71.160,-79.957)
O3': (36.385,-68.770,-78.248)
OP1: (31.121,-75.063,-84.644)
OP2: (33.397,-76.152,-84.243)
C3': (32.433,-73.884,-80.130)
C1': (32.511,-75.785,-78.747)
C5': (30.870,-75.007,-81.838)
O4': (31.523,-75.996,-79.725)
C8: (33.917,-77.220,-80.283)
O2': (31.987,-73.672,-77.780)
C6: (36.794,-78.057,-78.479)
C5: (35.593,-77.639,-79.070)
C4: (34.750,-76.851,-78.312)
P: (31.948,-76.085,-83.948)
C4': (31.209,-74.747,-80.391)
C2': (32.830,-74.295,-78.729)
C2: (36.113,-76.890,-76.610)
N1: (37.030,-77.655,-77.221)
N3: (34.951,-76.428,-77.063)
N6: (37.693,-78.822,-79.089)
N7: (35.051,-77.868,-80.323)
N9: (33.679,-76.588,-79.101)
O5': (31.709,-75.998,-82.391)
O3': (32.166,-72.501,-80.247)
Image (generated by PyMOL):
PyMOL image
show in jmol