Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3E5E:A10:A9
Extra
PDB:
ATOM 1 O3' A A 9 3.619 0.854 -14.292 1.00 67.93 O
ATOM 2 P G A 10 5.125 1.355 -14.086 1.00 69.59 P
ATOM 3 OP1 G A 10 5.815 0.212 -13.438 1.00 70.35 O
ATOM 4 OP2 G A 10 5.141 2.663 -13.384 1.00 68.74 O
ATOM 5 O5' G A 10 5.622 1.528 -15.610 1.00 69.08 O
ATOM 6 C5' G A 10 5.811 0.339 -16.375 1.00 70.43 C
ATOM 7 C4' G A 10 5.890 0.557 -17.877 1.00 72.04 C
ATOM 8 O4' G A 10 4.655 1.110 -18.407 1.00 71.86 O
ATOM 9 C3' G A 10 6.948 1.524 -18.379 1.00 73.36 C
ATOM 10 O3' G A 10 8.247 0.958 -18.329 1.00 77.39 O
ATOM 11 C2' G A 10 6.437 1.732 -19.802 1.00 71.93 C
ATOM 12 O2' G A 10 6.645 0.638 -20.669 1.00 71.82 O
ATOM 13 C1' G A 10 4.952 1.949 -19.512 1.00 70.57 C
ATOM 14 N9 G A 10 4.766 3.364 -19.174 1.00 68.09 N
ATOM 15 C8 G A 10 4.589 3.942 -17.933 1.00 67.19 C
ATOM 16 N7 G A 10 4.496 5.243 -17.970 1.00 66.13 N
ATOM 17 C5 G A 10 4.633 5.545 -19.318 1.00 65.67 C
ATOM 18 C6 G A 10 4.614 6.794 -19.978 1.00 65.29 C
ATOM 19 O6 G A 10 4.469 7.913 -19.466 1.00 65.62 O
ATOM 20 N1 G A 10 4.791 6.659 -21.360 1.00 64.90 N
ATOM 21 C2 G A 10 4.960 5.458 -22.019 1.00 64.51 C
ATOM 22 N2 G A 10 5.113 5.500 -23.346 1.00 63.91 N
ATOM 23 N3 G A 10 4.974 4.284 -21.411 1.00 64.92 N
ATOM 24 C4 G A 10 4.804 4.404 -20.070 1.00 66.18 C
ATOM 25 P G A 11 9.512 1.805 -17.807 1.00 80.13 P
ATOM 26 OP1 G A 11 10.559 0.808 -17.485 1.00 80.62 O
ATOM 27 OP2 G A 11 9.095 2.766 -16.756 1.00 79.77 O
ATOM 28 O5' G A 11 9.938 2.640 -19.110 1.00 80.57 O
TER
ATOM 1 O3' A B 8 -1.384 3.301 -10.698 1.00 61.92 O
ATOM 2 P A B 9 0.225 3.406 -10.619 1.00 65.41 P
ATOM 3 OP1 A B 9 0.625 3.006 -9.245 1.00 65.58 O
ATOM 4 OP2 A B 9 0.692 4.724 -11.132 1.00 64.78 O
ATOM 5 O5' A B 9 0.657 2.283 -11.681 1.00 63.93 O
ATOM 6 C5' A B 9 1.498 2.669 -12.743 1.00 64.02 C
ATOM 7 C4' A B 9 1.409 1.711 -13.908 1.00 64.23 C
ATOM 8 O4' A B 9 0.355 2.142 -14.796 1.00 63.62 O
ATOM 9 C3' A B 9 2.651 1.761 -14.774 1.00 65.33 C
ATOM 10 O3' A B 9 3.619 0.854 -14.292 1.00 67.93 O
ATOM 11 C2' A B 9 2.134 1.435 -16.170 1.00 64.17 C
ATOM 12 O2' A B 9 1.996 0.050 -16.410 1.00 66.12 O
ATOM 13 C1' A B 9 0.785 2.137 -16.143 1.00 62.10 C
ATOM 14 N9 A B 9 0.925 3.513 -16.592 1.00 59.72 N
ATOM 15 C8 A B 9 1.035 4.641 -15.820 1.00 58.94 C
ATOM 16 N7 A B 9 1.168 5.744 -16.522 1.00 57.90 N
ATOM 17 C5 A B 9 1.149 5.310 -17.836 1.00 56.70 C
ATOM 18 C6 A B 9 1.244 5.990 -19.063 1.00 55.79 C
ATOM 19 N6 A B 9 1.391 7.306 -19.149 1.00 55.01 N
ATOM 20 N1 A B 9 1.191 5.265 -20.202 1.00 56.46 N
ATOM 21 C2 A B 9 1.045 3.934 -20.108 1.00 57.30 C
ATOM 22 N3 A B 9 0.944 3.180 -19.006 1.00 57.66 N
ATOM 23 C4 A B 9 1.003 3.938 -17.898 1.00 58.03 C
ATOM 24 P G B 10 5.125 1.355 -14.086 1.00 69.59 P
ATOM 25 OP1 G B 10 5.815 0.212 -13.438 1.00 70.35 O
ATOM 26 OP2 G B 10 5.141 2.663 -13.384 1.00 68.74 O
ATOM 27 O5' G B 10 5.622 1.528 -15.610 1.00 69.08 O
TER
ATOM 2 P G A 10 5.125 1.355 -14.086 1.00 69.59 P
ATOM 3 OP1 G A 10 5.815 0.212 -13.438 1.00 70.35 O
ATOM 4 OP2 G A 10 5.141 2.663 -13.384 1.00 68.74 O
ATOM 5 O5' G A 10 5.622 1.528 -15.610 1.00 69.08 O
ATOM 6 C5' G A 10 5.811 0.339 -16.375 1.00 70.43 C
ATOM 7 C4' G A 10 5.890 0.557 -17.877 1.00 72.04 C
ATOM 8 O4' G A 10 4.655 1.110 -18.407 1.00 71.86 O
ATOM 9 C3' G A 10 6.948 1.524 -18.379 1.00 73.36 C
ATOM 10 O3' G A 10 8.247 0.958 -18.329 1.00 77.39 O
ATOM 11 C2' G A 10 6.437 1.732 -19.802 1.00 71.93 C
ATOM 12 O2' G A 10 6.645 0.638 -20.669 1.00 71.82 O
ATOM 13 C1' G A 10 4.952 1.949 -19.512 1.00 70.57 C
ATOM 14 N9 G A 10 4.766 3.364 -19.174 1.00 68.09 N
ATOM 15 C8 G A 10 4.589 3.942 -17.933 1.00 67.19 C
ATOM 16 N7 G A 10 4.496 5.243 -17.970 1.00 66.13 N
ATOM 17 C5 G A 10 4.633 5.545 -19.318 1.00 65.67 C
ATOM 18 C6 G A 10 4.614 6.794 -19.978 1.00 65.29 C
ATOM 19 O6 G A 10 4.469 7.913 -19.466 1.00 65.62 O
ATOM 20 N1 G A 10 4.791 6.659 -21.360 1.00 64.90 N
ATOM 21 C2 G A 10 4.960 5.458 -22.019 1.00 64.51 C
ATOM 22 N2 G A 10 5.113 5.500 -23.346 1.00 63.91 N
ATOM 23 N3 G A 10 4.974 4.284 -21.411 1.00 64.92 N
ATOM 24 C4 G A 10 4.804 4.404 -20.070 1.00 66.18 C
ATOM 25 P G A 11 9.512 1.805 -17.807 1.00 80.13 P
ATOM 26 OP1 G A 11 10.559 0.808 -17.485 1.00 80.62 O
ATOM 27 OP2 G A 11 9.095 2.766 -16.756 1.00 79.77 O
ATOM 28 O5' G A 11 9.938 2.640 -19.110 1.00 80.57 O
TER
ATOM 1 O3' A B 8 -1.384 3.301 -10.698 1.00 61.92 O
ATOM 2 P A B 9 0.225 3.406 -10.619 1.00 65.41 P
ATOM 3 OP1 A B 9 0.625 3.006 -9.245 1.00 65.58 O
ATOM 4 OP2 A B 9 0.692 4.724 -11.132 1.00 64.78 O
ATOM 5 O5' A B 9 0.657 2.283 -11.681 1.00 63.93 O
ATOM 6 C5' A B 9 1.498 2.669 -12.743 1.00 64.02 C
ATOM 7 C4' A B 9 1.409 1.711 -13.908 1.00 64.23 C
ATOM 8 O4' A B 9 0.355 2.142 -14.796 1.00 63.62 O
ATOM 9 C3' A B 9 2.651 1.761 -14.774 1.00 65.33 C
ATOM 10 O3' A B 9 3.619 0.854 -14.292 1.00 67.93 O
ATOM 11 C2' A B 9 2.134 1.435 -16.170 1.00 64.17 C
ATOM 12 O2' A B 9 1.996 0.050 -16.410 1.00 66.12 O
ATOM 13 C1' A B 9 0.785 2.137 -16.143 1.00 62.10 C
ATOM 14 N9 A B 9 0.925 3.513 -16.592 1.00 59.72 N
ATOM 15 C8 A B 9 1.035 4.641 -15.820 1.00 58.94 C
ATOM 16 N7 A B 9 1.168 5.744 -16.522 1.00 57.90 N
ATOM 17 C5 A B 9 1.149 5.310 -17.836 1.00 56.70 C
ATOM 18 C6 A B 9 1.244 5.990 -19.063 1.00 55.79 C
ATOM 19 N6 A B 9 1.391 7.306 -19.149 1.00 55.01 N
ATOM 20 N1 A B 9 1.191 5.265 -20.202 1.00 56.46 N
ATOM 21 C2 A B 9 1.045 3.934 -20.108 1.00 57.30 C
ATOM 22 N3 A B 9 0.944 3.180 -19.006 1.00 57.66 N
ATOM 23 C4 A B 9 1.003 3.938 -17.898 1.00 58.03 C
ATOM 24 P G B 10 5.125 1.355 -14.086 1.00 69.59 P
ATOM 25 OP1 G B 10 5.815 0.212 -13.438 1.00 70.35 O
ATOM 26 OP2 G B 10 5.141 2.663 -13.384 1.00 68.74 O
ATOM 27 O5' G B 10 5.622 1.528 -15.610 1.00 69.08 O
TER
Atoms:
OP1: (5.815,0.212,-13.438)
OP2: (5.141,2.663,-13.384)
C3': (6.948,1.524,-18.379)
C1': (4.952,1.949,-19.512)
C5': (5.811,0.339,-16.375)
O6: (4.469,7.913,-19.466)
O4': (4.655,1.110,-18.407)
C8: (4.589,3.942,-17.933)
C2: (4.960,5.458,-22.019)
C6: (4.614,6.794,-19.978)
C5: (4.633,5.545,-19.318)
C4: (4.804,4.404,-20.070)
P: (5.125,1.355,-14.086)
C4': (5.890,0.557,-17.877)
C2': (6.437,1.732,-19.802)
O2': (6.645,0.638,-20.669)
N1: (4.791,6.659,-21.360)
N2: (5.113,5.500,-23.346)
N3: (4.974,4.284,-21.411)
N7: (4.496,5.243,-17.970)
N9: (4.766,3.364,-19.174)
O5': (5.622,1.528,-15.610)
O3': (8.247,0.958,-18.329)
OP2: (5.141,2.663,-13.384)
C3': (6.948,1.524,-18.379)
C1': (4.952,1.949,-19.512)
C5': (5.811,0.339,-16.375)
O6: (4.469,7.913,-19.466)
O4': (4.655,1.110,-18.407)
C8: (4.589,3.942,-17.933)
C2: (4.960,5.458,-22.019)
C6: (4.614,6.794,-19.978)
C5: (4.633,5.545,-19.318)
C4: (4.804,4.404,-20.070)
P: (5.125,1.355,-14.086)
C4': (5.890,0.557,-17.877)
C2': (6.437,1.732,-19.802)
O2': (6.645,0.638,-20.669)
N1: (4.791,6.659,-21.360)
N2: (5.113,5.500,-23.346)
N3: (4.974,4.284,-21.411)
N7: (4.496,5.243,-17.970)
N9: (4.766,3.364,-19.174)
O5': (5.622,1.528,-15.610)
O3': (8.247,0.958,-18.329)
OP1: (0.625,3.006,-9.245)
OP2: (0.692,4.724,-11.132)
C3': (2.651,1.761,-14.774)
C1': (0.785,2.137,-16.143)
C5': (1.498,2.669,-12.743)
O4': (0.355,2.142,-14.796)
C8: (1.035,4.641,-15.820)
O2': (1.996,0.050,-16.410)
C6: (1.244,5.990,-19.063)
C5: (1.149,5.310,-17.836)
C4: (1.003,3.938,-17.898)
P: (0.225,3.406,-10.619)
C4': (1.409,1.711,-13.908)
C2': (2.134,1.435,-16.170)
C2: (1.045,3.934,-20.108)
N1: (1.191,5.265,-20.202)
N3: (0.944,3.180,-19.006)
N6: (1.391,7.306,-19.149)
N7: (1.168,5.744,-16.522)
N9: (0.925,3.513,-16.592)
O5': (0.657,2.283,-11.681)
O3': (3.619,0.854,-14.292)
OP2: (0.692,4.724,-11.132)
C3': (2.651,1.761,-14.774)
C1': (0.785,2.137,-16.143)
C5': (1.498,2.669,-12.743)
O4': (0.355,2.142,-14.796)
C8: (1.035,4.641,-15.820)
O2': (1.996,0.050,-16.410)
C6: (1.244,5.990,-19.063)
C5: (1.149,5.310,-17.836)
C4: (1.003,3.938,-17.898)
P: (0.225,3.406,-10.619)
C4': (1.409,1.711,-13.908)
C2': (2.134,1.435,-16.170)
C2: (1.045,3.934,-20.108)
N1: (1.191,5.265,-20.202)
N3: (0.944,3.180,-19.006)
N6: (1.391,7.306,-19.149)
N7: (1.168,5.744,-16.522)
N9: (0.925,3.513,-16.592)
O5': (0.657,2.283,-11.681)
O3': (3.619,0.854,-14.292)
Image (generated by PyMOL):