Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
435D:A2:A1
Extra
PDB:
ATOM 1 O3' A A 1 2.763 -9.573 2.798 1.00 16.30 O
ATOM 2 P G A 2 3.545 -8.316 3.374 1.00 15.53 P
ATOM 3 OP1 G A 2 4.471 -8.797 4.417 1.00 20.09 O
ATOM 4 OP2 G A 2 2.534 -7.290 3.723 1.00 16.79 O
ATOM 5 O5' G A 2 4.383 -7.768 2.114 1.00 13.49 O
ATOM 6 C5' G A 2 5.640 -8.274 1.643 1.00 12.11 C
ATOM 7 C4' G A 2 5.934 -7.549 0.317 1.00 10.70 C
ATOM 8 O4' G A 2 4.853 -7.749 -0.572 1.00 9.30 O
ATOM 9 C3' G A 2 6.071 -6.048 0.411 1.00 10.52 C
ATOM 10 O3' G A 2 7.317 -5.776 1.096 1.00 12.63 O
ATOM 11 C2' G A 2 6.029 -5.706 -1.000 1.00 9.73 C
ATOM 12 O2' G A 2 7.123 -6.128 -1.715 1.00 12.66 O
ATOM 13 C1' G A 2 4.836 -6.603 -1.378 1.00 9.80 C
ATOM 14 N9 G A 2 3.569 -5.931 -1.124 1.00 10.36 N
ATOM 15 C8 G A 2 2.699 -6.176 -0.083 1.00 10.01 C
ATOM 16 N7 G A 2 1.644 -5.407 -0.122 1.00 9.63 N
ATOM 17 C5 G A 2 1.833 -4.618 -1.250 1.00 9.33 C
ATOM 18 C6 G A 2 1.017 -3.600 -1.800 1.00 9.16 C
ATOM 19 O6 G A 2 -0.065 -3.205 -1.362 1.00 10.87 O
ATOM 20 N1 G A 2 1.580 -3.052 -2.948 1.00 9.58 N
ATOM 21 C2 G A 2 2.779 -3.435 -3.500 1.00 9.53 C
ATOM 22 N2 G A 2 3.165 -2.797 -4.608 1.00 10.52 N
ATOM 23 N3 G A 2 3.547 -4.386 -2.991 1.00 9.17 N
ATOM 24 C4 G A 2 3.016 -4.928 -1.878 1.00 9.78 C
ATOM 25 P C A 3 7.601 -4.397 1.817 1.00 14.52 P
ATOM 26 OP1 C A 3 8.962 -4.409 2.353 1.00 16.35 O
ATOM 27 OP2 C A 3 6.518 -4.151 2.812 1.00 19.50 O
ATOM 28 O5' C A 3 7.408 -3.322 0.662 1.00 13.53 O
TER
ATOM 1 P A B 1 -2.127 -9.910 4.366 1.00 22.16 P
ATOM 2 OP1 A B 1 -1.602 -10.269 5.697 1.00 22.32 O
ATOM 3 OP2 A B 1 -2.937 -8.679 4.192 1.00 20.56 O
ATOM 4 O5' A B 1 -0.934 -9.859 3.330 1.00 20.76 O
ATOM 5 C5' A B 1 -0.062 -11.010 3.373 1.00 20.08 C
ATOM 6 C4' A B 1 0.807 -10.752 2.097 1.00 18.92 C
ATOM 7 O4' A B 1 -0.092 -10.715 1.033 1.00 19.14 O
ATOM 8 C3' A B 1 1.540 -9.458 2.034 1.00 17.47 C
ATOM 9 O3' A B 1 2.763 -9.573 2.798 1.00 16.30 O
ATOM 10 C2' A B 1 1.805 -9.326 0.615 1.00 18.47 C
ATOM 11 O2' A B 1 2.784 -10.173 0.123 1.00 19.46 O
ATOM 12 C1' A B 1 0.483 -9.853 0.061 1.00 18.42 C
ATOM 13 N9 A B 1 -0.473 -8.782 -0.212 1.00 18.54 N
ATOM 14 C8 A B 1 -1.556 -8.355 0.510 1.00 19.24 C
ATOM 15 N7 A B 1 -2.198 -7.353 -0.046 1.00 19.58 N
ATOM 16 C5 A B 1 -1.487 -7.102 -1.213 1.00 19.00 C
ATOM 17 C6 A B 1 -1.635 -6.172 -2.257 1.00 18.75 C
ATOM 18 N6 A B 1 -2.601 -5.252 -2.320 1.00 21.80 N
ATOM 19 N1 A B 1 -0.733 -6.214 -3.263 1.00 17.61 N
ATOM 20 C2 A B 1 0.245 -7.120 -3.234 1.00 17.50 C
ATOM 21 N3 A B 1 0.487 -8.047 -2.311 1.00 17.86 N
ATOM 22 C4 A B 1 -0.423 -7.977 -1.327 1.00 18.37 C
ATOM 23 P G B 2 3.545 -8.316 3.374 1.00 15.53 P
ATOM 24 OP1 G B 2 4.471 -8.797 4.417 1.00 20.09 O
ATOM 25 OP2 G B 2 2.534 -7.290 3.723 1.00 16.79 O
ATOM 26 O5' G B 2 4.383 -7.768 2.114 1.00 13.49 O
TER
ATOM 2 P G A 2 3.545 -8.316 3.374 1.00 15.53 P
ATOM 3 OP1 G A 2 4.471 -8.797 4.417 1.00 20.09 O
ATOM 4 OP2 G A 2 2.534 -7.290 3.723 1.00 16.79 O
ATOM 5 O5' G A 2 4.383 -7.768 2.114 1.00 13.49 O
ATOM 6 C5' G A 2 5.640 -8.274 1.643 1.00 12.11 C
ATOM 7 C4' G A 2 5.934 -7.549 0.317 1.00 10.70 C
ATOM 8 O4' G A 2 4.853 -7.749 -0.572 1.00 9.30 O
ATOM 9 C3' G A 2 6.071 -6.048 0.411 1.00 10.52 C
ATOM 10 O3' G A 2 7.317 -5.776 1.096 1.00 12.63 O
ATOM 11 C2' G A 2 6.029 -5.706 -1.000 1.00 9.73 C
ATOM 12 O2' G A 2 7.123 -6.128 -1.715 1.00 12.66 O
ATOM 13 C1' G A 2 4.836 -6.603 -1.378 1.00 9.80 C
ATOM 14 N9 G A 2 3.569 -5.931 -1.124 1.00 10.36 N
ATOM 15 C8 G A 2 2.699 -6.176 -0.083 1.00 10.01 C
ATOM 16 N7 G A 2 1.644 -5.407 -0.122 1.00 9.63 N
ATOM 17 C5 G A 2 1.833 -4.618 -1.250 1.00 9.33 C
ATOM 18 C6 G A 2 1.017 -3.600 -1.800 1.00 9.16 C
ATOM 19 O6 G A 2 -0.065 -3.205 -1.362 1.00 10.87 O
ATOM 20 N1 G A 2 1.580 -3.052 -2.948 1.00 9.58 N
ATOM 21 C2 G A 2 2.779 -3.435 -3.500 1.00 9.53 C
ATOM 22 N2 G A 2 3.165 -2.797 -4.608 1.00 10.52 N
ATOM 23 N3 G A 2 3.547 -4.386 -2.991 1.00 9.17 N
ATOM 24 C4 G A 2 3.016 -4.928 -1.878 1.00 9.78 C
ATOM 25 P C A 3 7.601 -4.397 1.817 1.00 14.52 P
ATOM 26 OP1 C A 3 8.962 -4.409 2.353 1.00 16.35 O
ATOM 27 OP2 C A 3 6.518 -4.151 2.812 1.00 19.50 O
ATOM 28 O5' C A 3 7.408 -3.322 0.662 1.00 13.53 O
TER
ATOM 1 P A B 1 -2.127 -9.910 4.366 1.00 22.16 P
ATOM 2 OP1 A B 1 -1.602 -10.269 5.697 1.00 22.32 O
ATOM 3 OP2 A B 1 -2.937 -8.679 4.192 1.00 20.56 O
ATOM 4 O5' A B 1 -0.934 -9.859 3.330 1.00 20.76 O
ATOM 5 C5' A B 1 -0.062 -11.010 3.373 1.00 20.08 C
ATOM 6 C4' A B 1 0.807 -10.752 2.097 1.00 18.92 C
ATOM 7 O4' A B 1 -0.092 -10.715 1.033 1.00 19.14 O
ATOM 8 C3' A B 1 1.540 -9.458 2.034 1.00 17.47 C
ATOM 9 O3' A B 1 2.763 -9.573 2.798 1.00 16.30 O
ATOM 10 C2' A B 1 1.805 -9.326 0.615 1.00 18.47 C
ATOM 11 O2' A B 1 2.784 -10.173 0.123 1.00 19.46 O
ATOM 12 C1' A B 1 0.483 -9.853 0.061 1.00 18.42 C
ATOM 13 N9 A B 1 -0.473 -8.782 -0.212 1.00 18.54 N
ATOM 14 C8 A B 1 -1.556 -8.355 0.510 1.00 19.24 C
ATOM 15 N7 A B 1 -2.198 -7.353 -0.046 1.00 19.58 N
ATOM 16 C5 A B 1 -1.487 -7.102 -1.213 1.00 19.00 C
ATOM 17 C6 A B 1 -1.635 -6.172 -2.257 1.00 18.75 C
ATOM 18 N6 A B 1 -2.601 -5.252 -2.320 1.00 21.80 N
ATOM 19 N1 A B 1 -0.733 -6.214 -3.263 1.00 17.61 N
ATOM 20 C2 A B 1 0.245 -7.120 -3.234 1.00 17.50 C
ATOM 21 N3 A B 1 0.487 -8.047 -2.311 1.00 17.86 N
ATOM 22 C4 A B 1 -0.423 -7.977 -1.327 1.00 18.37 C
ATOM 23 P G B 2 3.545 -8.316 3.374 1.00 15.53 P
ATOM 24 OP1 G B 2 4.471 -8.797 4.417 1.00 20.09 O
ATOM 25 OP2 G B 2 2.534 -7.290 3.723 1.00 16.79 O
ATOM 26 O5' G B 2 4.383 -7.768 2.114 1.00 13.49 O
TER
Atoms:
OP1: (4.471,-8.797,4.417)
OP2: (2.534,-7.290,3.723)
C3': (6.071,-6.048,0.411)
C1': (4.836,-6.603,-1.378)
C5': (5.640,-8.274,1.643)
O6: (-0.065,-3.205,-1.362)
O4': (4.853,-7.749,-0.572)
C8: (2.699,-6.176,-0.083)
C2: (2.779,-3.435,-3.500)
C6: (1.017,-3.600,-1.800)
C5: (1.833,-4.618,-1.250)
C4: (3.016,-4.928,-1.878)
P: (3.545,-8.316,3.374)
C4': (5.934,-7.549,0.317)
C2': (6.029,-5.706,-1.000)
O2': (7.123,-6.128,-1.715)
N1: (1.580,-3.052,-2.948)
N2: (3.165,-2.797,-4.608)
N3: (3.547,-4.386,-2.991)
N7: (1.644,-5.407,-0.122)
N9: (3.569,-5.931,-1.124)
O5': (4.383,-7.768,2.114)
O3': (7.317,-5.776,1.096)
OP2: (2.534,-7.290,3.723)
C3': (6.071,-6.048,0.411)
C1': (4.836,-6.603,-1.378)
C5': (5.640,-8.274,1.643)
O6: (-0.065,-3.205,-1.362)
O4': (4.853,-7.749,-0.572)
C8: (2.699,-6.176,-0.083)
C2: (2.779,-3.435,-3.500)
C6: (1.017,-3.600,-1.800)
C5: (1.833,-4.618,-1.250)
C4: (3.016,-4.928,-1.878)
P: (3.545,-8.316,3.374)
C4': (5.934,-7.549,0.317)
C2': (6.029,-5.706,-1.000)
O2': (7.123,-6.128,-1.715)
N1: (1.580,-3.052,-2.948)
N2: (3.165,-2.797,-4.608)
N3: (3.547,-4.386,-2.991)
N7: (1.644,-5.407,-0.122)
N9: (3.569,-5.931,-1.124)
O5': (4.383,-7.768,2.114)
O3': (7.317,-5.776,1.096)
OP1: (-1.602,-10.269,5.697)
OP2: (-2.937,-8.679,4.192)
C3': (1.540,-9.458,2.034)
C1': (0.483,-9.853,0.061)
C5': (-0.062,-11.010,3.373)
O4': (-0.092,-10.715,1.033)
C8: (-1.556,-8.355,0.510)
O2': (2.784,-10.173,0.123)
C6: (-1.635,-6.172,-2.257)
C5: (-1.487,-7.102,-1.213)
C4: (-0.423,-7.977,-1.327)
P: (-2.127,-9.910,4.366)
C4': (0.807,-10.752,2.097)
C2': (1.805,-9.326,0.615)
C2: (0.245,-7.120,-3.234)
N1: (-0.733,-6.214,-3.263)
N3: (0.487,-8.047,-2.311)
N6: (-2.601,-5.252,-2.320)
N7: (-2.198,-7.353,-0.046)
N9: (-0.473,-8.782,-0.212)
O5': (-0.934,-9.859,3.330)
O3': (2.763,-9.573,2.798)
OP2: (-2.937,-8.679,4.192)
C3': (1.540,-9.458,2.034)
C1': (0.483,-9.853,0.061)
C5': (-0.062,-11.010,3.373)
O4': (-0.092,-10.715,1.033)
C8: (-1.556,-8.355,0.510)
O2': (2.784,-10.173,0.123)
C6: (-1.635,-6.172,-2.257)
C5: (-1.487,-7.102,-1.213)
C4: (-0.423,-7.977,-1.327)
P: (-2.127,-9.910,4.366)
C4': (0.807,-10.752,2.097)
C2': (1.805,-9.326,0.615)
C2: (0.245,-7.120,-3.234)
N1: (-0.733,-6.214,-3.263)
N3: (0.487,-8.047,-2.311)
N6: (-2.601,-5.252,-2.320)
N7: (-2.198,-7.353,-0.046)
N9: (-0.473,-8.782,-0.212)
O5': (-0.934,-9.859,3.330)
O3': (2.763,-9.573,2.798)
Image (generated by PyMOL):