Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0725:0724
Extra
PDB:
ATOM 1 O3' A A 724 58.546 50.920 58.664 1.00 86.16 O
ATOM 2 P G A 725 57.234 51.788 58.331 1.00 83.11 P
ATOM 3 OP1 G A 725 56.066 51.150 58.988 1.00 83.37 O
ATOM 4 OP2 G A 725 57.210 52.024 56.867 1.00 83.77 O
ATOM 5 O5' G A 725 57.507 53.174 59.064 1.00 82.12 O
ATOM 6 C5' G A 725 57.856 53.210 60.464 1.00 78.84 C
ATOM 7 C4' G A 725 58.563 54.505 60.805 1.00 75.82 C
ATOM 8 O4' G A 725 59.788 54.609 60.029 1.00 75.26 O
ATOM 9 C3' G A 725 57.823 55.792 60.478 1.00 72.52 C
ATOM 10 O3' G A 725 56.839 56.129 61.450 1.00 70.66 O
ATOM 11 C2' G A 725 58.965 56.792 60.419 1.00 72.12 C
ATOM 12 O2' G A 725 59.447 57.139 61.701 1.00 70.27 O
ATOM 13 C1' G A 725 60.025 55.967 59.690 1.00 73.20 C
ATOM 14 N9 G A 725 59.901 56.110 58.240 1.00 73.30 N
ATOM 15 C8 G A 725 59.203 55.300 57.376 1.00 73.13 C
ATOM 16 N7 G A 725 59.239 55.718 56.140 1.00 73.24 N
ATOM 17 C5 G A 725 60.015 56.867 56.190 1.00 73.52 C
ATOM 18 C6 G A 725 60.398 57.761 55.162 1.00 73.43 C
ATOM 19 O6 G A 725 60.121 57.716 53.958 1.00 74.01 O
ATOM 20 N1 G A 725 61.184 58.795 55.653 1.00 73.02 N
ATOM 21 C2 G A 725 61.562 58.947 56.961 1.00 73.23 C
ATOM 22 N2 G A 725 62.336 60.005 57.240 1.00 73.65 N
ATOM 23 N3 G A 725 61.213 58.124 57.927 1.00 73.92 N
ATOM 24 C4 G A 725 60.442 57.115 57.475 1.00 73.50 C
ATOM 25 P G A 726 55.744 57.258 61.111 1.00 68.33 P
ATOM 26 OP1 G A 726 54.602 57.125 62.053 1.00 67.75 O
ATOM 27 OP2 G A 726 55.494 57.242 59.646 1.00 66.72 O
ATOM 28 O5' G A 726 56.498 58.608 61.483 1.00 66.62 O
TER
ATOM 1 O3' A B 723 61.733 48.576 54.029 1.00 96.99 O
ATOM 2 P A B 724 60.466 49.558 53.862 1.00 95.87 P
ATOM 3 OP1 A B 724 59.279 48.740 53.490 1.00 95.46 O
ATOM 4 OP2 A B 724 60.875 50.694 52.994 1.00 94.80 O
ATOM 5 O5' A B 724 60.235 50.135 55.330 1.00 95.09 O
ATOM 6 C5' A B 724 60.225 49.259 56.477 1.00 92.95 C
ATOM 7 C4' A B 724 60.617 50.018 57.725 1.00 91.18 C
ATOM 8 O4' A B 724 61.962 50.552 57.569 1.00 92.79 O
ATOM 9 C3' A B 724 59.779 51.245 58.036 1.00 89.49 C
ATOM 10 O3' A B 724 58.546 50.920 58.664 1.00 86.16 O
ATOM 11 C2' A B 724 60.721 52.047 58.923 1.00 91.33 C
ATOM 12 O2' A B 724 60.809 51.557 60.245 1.00 92.08 O
ATOM 13 C1' A B 724 62.056 51.815 58.211 1.00 93.17 C
ATOM 14 N9 A B 724 62.299 52.846 57.194 1.00 95.38 N
ATOM 15 C8 A B 724 61.656 53.012 55.987 1.00 95.89 C
ATOM 16 N7 A B 724 62.043 54.074 55.324 1.00 96.20 N
ATOM 17 C5 A B 724 63.014 54.641 56.138 1.00 96.67 C
ATOM 18 C6 A B 724 63.798 55.804 56.008 1.00 97.20 C
ATOM 19 N6 A B 724 63.711 56.647 54.974 1.00 97.34 N
ATOM 20 N1 A B 724 64.680 56.080 56.994 1.00 97.12 N
ATOM 21 C2 A B 724 64.754 55.247 58.039 1.00 96.90 C
ATOM 22 N3 A B 724 64.065 54.133 58.281 1.00 97.03 N
ATOM 23 C4 A B 724 63.200 53.883 57.281 1.00 96.26 C
ATOM 24 P G B 725 57.234 51.788 58.331 1.00 83.11 P
ATOM 25 OP1 G B 725 56.066 51.150 58.988 1.00 83.37 O
ATOM 26 OP2 G B 725 57.210 52.024 56.867 1.00 83.77 O
ATOM 27 O5' G B 725 57.507 53.174 59.064 1.00 82.12 O
TER
ATOM 2 P G A 725 57.234 51.788 58.331 1.00 83.11 P
ATOM 3 OP1 G A 725 56.066 51.150 58.988 1.00 83.37 O
ATOM 4 OP2 G A 725 57.210 52.024 56.867 1.00 83.77 O
ATOM 5 O5' G A 725 57.507 53.174 59.064 1.00 82.12 O
ATOM 6 C5' G A 725 57.856 53.210 60.464 1.00 78.84 C
ATOM 7 C4' G A 725 58.563 54.505 60.805 1.00 75.82 C
ATOM 8 O4' G A 725 59.788 54.609 60.029 1.00 75.26 O
ATOM 9 C3' G A 725 57.823 55.792 60.478 1.00 72.52 C
ATOM 10 O3' G A 725 56.839 56.129 61.450 1.00 70.66 O
ATOM 11 C2' G A 725 58.965 56.792 60.419 1.00 72.12 C
ATOM 12 O2' G A 725 59.447 57.139 61.701 1.00 70.27 O
ATOM 13 C1' G A 725 60.025 55.967 59.690 1.00 73.20 C
ATOM 14 N9 G A 725 59.901 56.110 58.240 1.00 73.30 N
ATOM 15 C8 G A 725 59.203 55.300 57.376 1.00 73.13 C
ATOM 16 N7 G A 725 59.239 55.718 56.140 1.00 73.24 N
ATOM 17 C5 G A 725 60.015 56.867 56.190 1.00 73.52 C
ATOM 18 C6 G A 725 60.398 57.761 55.162 1.00 73.43 C
ATOM 19 O6 G A 725 60.121 57.716 53.958 1.00 74.01 O
ATOM 20 N1 G A 725 61.184 58.795 55.653 1.00 73.02 N
ATOM 21 C2 G A 725 61.562 58.947 56.961 1.00 73.23 C
ATOM 22 N2 G A 725 62.336 60.005 57.240 1.00 73.65 N
ATOM 23 N3 G A 725 61.213 58.124 57.927 1.00 73.92 N
ATOM 24 C4 G A 725 60.442 57.115 57.475 1.00 73.50 C
ATOM 25 P G A 726 55.744 57.258 61.111 1.00 68.33 P
ATOM 26 OP1 G A 726 54.602 57.125 62.053 1.00 67.75 O
ATOM 27 OP2 G A 726 55.494 57.242 59.646 1.00 66.72 O
ATOM 28 O5' G A 726 56.498 58.608 61.483 1.00 66.62 O
TER
ATOM 1 O3' A B 723 61.733 48.576 54.029 1.00 96.99 O
ATOM 2 P A B 724 60.466 49.558 53.862 1.00 95.87 P
ATOM 3 OP1 A B 724 59.279 48.740 53.490 1.00 95.46 O
ATOM 4 OP2 A B 724 60.875 50.694 52.994 1.00 94.80 O
ATOM 5 O5' A B 724 60.235 50.135 55.330 1.00 95.09 O
ATOM 6 C5' A B 724 60.225 49.259 56.477 1.00 92.95 C
ATOM 7 C4' A B 724 60.617 50.018 57.725 1.00 91.18 C
ATOM 8 O4' A B 724 61.962 50.552 57.569 1.00 92.79 O
ATOM 9 C3' A B 724 59.779 51.245 58.036 1.00 89.49 C
ATOM 10 O3' A B 724 58.546 50.920 58.664 1.00 86.16 O
ATOM 11 C2' A B 724 60.721 52.047 58.923 1.00 91.33 C
ATOM 12 O2' A B 724 60.809 51.557 60.245 1.00 92.08 O
ATOM 13 C1' A B 724 62.056 51.815 58.211 1.00 93.17 C
ATOM 14 N9 A B 724 62.299 52.846 57.194 1.00 95.38 N
ATOM 15 C8 A B 724 61.656 53.012 55.987 1.00 95.89 C
ATOM 16 N7 A B 724 62.043 54.074 55.324 1.00 96.20 N
ATOM 17 C5 A B 724 63.014 54.641 56.138 1.00 96.67 C
ATOM 18 C6 A B 724 63.798 55.804 56.008 1.00 97.20 C
ATOM 19 N6 A B 724 63.711 56.647 54.974 1.00 97.34 N
ATOM 20 N1 A B 724 64.680 56.080 56.994 1.00 97.12 N
ATOM 21 C2 A B 724 64.754 55.247 58.039 1.00 96.90 C
ATOM 22 N3 A B 724 64.065 54.133 58.281 1.00 97.03 N
ATOM 23 C4 A B 724 63.200 53.883 57.281 1.00 96.26 C
ATOM 24 P G B 725 57.234 51.788 58.331 1.00 83.11 P
ATOM 25 OP1 G B 725 56.066 51.150 58.988 1.00 83.37 O
ATOM 26 OP2 G B 725 57.210 52.024 56.867 1.00 83.77 O
ATOM 27 O5' G B 725 57.507 53.174 59.064 1.00 82.12 O
TER
Atoms:
OP1: (56.066,51.150,58.988)
OP2: (57.210,52.024,56.867)
C3': (57.823,55.792,60.478)
C1': (60.025,55.967,59.690)
C5': (57.856,53.210,60.464)
O6: (60.121,57.716,53.958)
O4': (59.788,54.609,60.029)
C8: (59.203,55.300,57.376)
C2: (61.562,58.947,56.961)
C6: (60.398,57.761,55.162)
C5: (60.015,56.867,56.190)
C4: (60.442,57.115,57.475)
P: (57.234,51.788,58.331)
C4': (58.563,54.505,60.805)
C2': (58.965,56.792,60.419)
O2': (59.447,57.139,61.701)
N1: (61.184,58.795,55.653)
N2: (62.336,60.005,57.240)
N3: (61.213,58.124,57.927)
N7: (59.239,55.718,56.140)
N9: (59.901,56.110,58.240)
O5': (57.507,53.174,59.064)
O3': (56.839,56.129,61.450)
OP2: (57.210,52.024,56.867)
C3': (57.823,55.792,60.478)
C1': (60.025,55.967,59.690)
C5': (57.856,53.210,60.464)
O6: (60.121,57.716,53.958)
O4': (59.788,54.609,60.029)
C8: (59.203,55.300,57.376)
C2: (61.562,58.947,56.961)
C6: (60.398,57.761,55.162)
C5: (60.015,56.867,56.190)
C4: (60.442,57.115,57.475)
P: (57.234,51.788,58.331)
C4': (58.563,54.505,60.805)
C2': (58.965,56.792,60.419)
O2': (59.447,57.139,61.701)
N1: (61.184,58.795,55.653)
N2: (62.336,60.005,57.240)
N3: (61.213,58.124,57.927)
N7: (59.239,55.718,56.140)
N9: (59.901,56.110,58.240)
O5': (57.507,53.174,59.064)
O3': (56.839,56.129,61.450)
OP1: (59.279,48.740,53.490)
OP2: (60.875,50.694,52.994)
C3': (59.779,51.245,58.036)
C1': (62.056,51.815,58.211)
C5': (60.225,49.259,56.477)
O4': (61.962,50.552,57.569)
C8: (61.656,53.012,55.987)
O2': (60.809,51.557,60.245)
C6: (63.798,55.804,56.008)
C5: (63.014,54.641,56.138)
C4: (63.200,53.883,57.281)
P: (60.466,49.558,53.862)
C4': (60.617,50.018,57.725)
C2': (60.721,52.047,58.923)
C2: (64.754,55.247,58.039)
N1: (64.680,56.080,56.994)
N3: (64.065,54.133,58.281)
N6: (63.711,56.647,54.974)
N7: (62.043,54.074,55.324)
N9: (62.299,52.846,57.194)
O5': (60.235,50.135,55.330)
O3': (58.546,50.920,58.664)
OP2: (60.875,50.694,52.994)
C3': (59.779,51.245,58.036)
C1': (62.056,51.815,58.211)
C5': (60.225,49.259,56.477)
O4': (61.962,50.552,57.569)
C8: (61.656,53.012,55.987)
O2': (60.809,51.557,60.245)
C6: (63.798,55.804,56.008)
C5: (63.014,54.641,56.138)
C4: (63.200,53.883,57.281)
P: (60.466,49.558,53.862)
C4': (60.617,50.018,57.725)
C2': (60.721,52.047,58.923)
C2: (64.754,55.247,58.039)
N1: (64.680,56.080,56.994)
N3: (64.065,54.133,58.281)
N6: (63.711,56.647,54.974)
N7: (62.043,54.074,55.324)
N9: (62.299,52.846,57.194)
O5': (60.235,50.135,55.330)
O3': (58.546,50.920,58.664)
Image (generated by PyMOL):