Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01480:01481
Extra
PDB:
ATOM 1 O3' G A1479 106.792 191.628 23.865 1.00111.70 O
ATOM 2 P C A1480 108.275 191.002 23.783 1.00112.57 P
ATOM 3 OP1 C A1480 108.994 191.735 22.715 1.00112.62 O
ATOM 4 OP2 C A1480 108.179 189.519 23.718 1.00112.26 O
ATOM 5 O5' C A1480 108.934 191.403 25.176 1.00113.20 O
ATOM 6 C5' C A1480 109.202 192.781 25.492 1.00114.64 C
ATOM 7 C4' C A1480 109.750 192.906 26.894 1.00116.17 C
ATOM 8 O4' C A1480 108.735 192.509 27.857 1.00116.91 O
ATOM 9 C3' C A1480 110.919 192.003 27.244 1.00117.07 C
ATOM 10 O3' C A1480 112.164 192.446 26.735 1.00118.62 O
ATOM 11 C2' C A1480 110.872 192.021 28.762 1.00117.26 C
ATOM 12 O2' C A1480 111.379 193.222 29.309 1.00116.61 O
ATOM 13 C1' C A1480 109.363 191.937 29.000 1.00117.86 C
ATOM 14 N1 C A1480 108.928 190.529 29.153 1.00118.85 N
ATOM 15 C2 C A1480 108.910 189.964 30.441 1.00119.20 C
ATOM 16 O2 C A1480 109.206 190.673 31.415 1.00120.19 O
ATOM 17 N3 C A1480 108.572 188.662 30.589 1.00119.14 N
ATOM 18 C4 C A1480 108.253 187.929 29.521 1.00119.54 C
ATOM 19 N4 C A1480 107.947 186.643 29.716 1.00119.35 N
ATOM 20 C5 C A1480 108.236 188.480 28.204 1.00119.55 C
ATOM 21 C6 C A1480 108.573 189.772 28.067 1.00119.31 C
ATOM 22 P A A1481 113.301 191.362 26.386 1.00120.65 P
ATOM 23 OP1 A A1481 114.397 192.088 25.698 1.00121.10 O
ATOM 24 OP2 A A1481 112.649 190.206 25.708 1.00119.79 O
ATOM 25 O5' A A1481 113.838 190.877 27.811 1.00121.24 O
TER
ATOM 1 O3' C B1480 112.164 192.446 26.735 1.00118.62 O
ATOM 2 P A B1481 113.301 191.362 26.386 1.00120.65 P
ATOM 3 OP1 A B1481 114.397 192.088 25.698 1.00121.10 O
ATOM 4 OP2 A B1481 112.649 190.206 25.708 1.00119.79 O
ATOM 5 O5' A B1481 113.838 190.877 27.811 1.00121.24 O
ATOM 6 C5' A B1481 114.458 191.807 28.731 1.00122.40 C
ATOM 7 C4' A B1481 114.534 191.215 30.126 1.00123.65 C
ATOM 8 O4' A B1481 113.200 190.828 30.556 1.00123.77 O
ATOM 9 C3' A B1481 115.356 189.945 30.293 1.00124.55 C
ATOM 10 O3' A B1481 116.749 190.210 30.443 1.00125.83 O
ATOM 11 C2' A B1481 114.758 189.340 31.557 1.00124.11 C
ATOM 12 O2' A B1481 115.214 189.955 32.746 1.00123.83 O
ATOM 13 C1' A B1481 113.275 189.660 31.363 1.00123.78 C
ATOM 14 N9 A B1481 112.550 188.584 30.683 1.00123.96 N
ATOM 15 C8 A B1481 111.812 188.659 29.526 1.00123.86 C
ATOM 16 N7 A B1481 111.279 187.518 29.163 1.00123.76 N
ATOM 17 C5 A B1481 111.692 186.631 30.145 1.00124.11 C
ATOM 18 C6 A B1481 111.460 185.260 30.335 1.00123.91 C
ATOM 19 N6 A B1481 110.720 184.515 29.511 1.00123.82 N
ATOM 20 N1 A B1481 112.021 184.672 31.414 1.00123.88 N
ATOM 21 C2 A B1481 112.759 185.421 32.241 1.00123.95 C
ATOM 22 N3 A B1481 113.048 186.718 32.172 1.00123.93 N
ATOM 23 C4 A B1481 112.477 187.272 31.087 1.00124.16 C
ATOM 24 P G B1482 117.828 189.139 29.915 1.00126.48 P
ATOM 25 OP1 G B1482 119.153 189.523 30.471 1.00126.16 O
ATOM 26 OP2 G B1482 117.660 188.995 28.443 1.00126.19 O
ATOM 27 O5' G B1482 117.380 187.766 30.589 1.00127.65 O
TER
ATOM 2 P C A1480 108.275 191.002 23.783 1.00112.57 P
ATOM 3 OP1 C A1480 108.994 191.735 22.715 1.00112.62 O
ATOM 4 OP2 C A1480 108.179 189.519 23.718 1.00112.26 O
ATOM 5 O5' C A1480 108.934 191.403 25.176 1.00113.20 O
ATOM 6 C5' C A1480 109.202 192.781 25.492 1.00114.64 C
ATOM 7 C4' C A1480 109.750 192.906 26.894 1.00116.17 C
ATOM 8 O4' C A1480 108.735 192.509 27.857 1.00116.91 O
ATOM 9 C3' C A1480 110.919 192.003 27.244 1.00117.07 C
ATOM 10 O3' C A1480 112.164 192.446 26.735 1.00118.62 O
ATOM 11 C2' C A1480 110.872 192.021 28.762 1.00117.26 C
ATOM 12 O2' C A1480 111.379 193.222 29.309 1.00116.61 O
ATOM 13 C1' C A1480 109.363 191.937 29.000 1.00117.86 C
ATOM 14 N1 C A1480 108.928 190.529 29.153 1.00118.85 N
ATOM 15 C2 C A1480 108.910 189.964 30.441 1.00119.20 C
ATOM 16 O2 C A1480 109.206 190.673 31.415 1.00120.19 O
ATOM 17 N3 C A1480 108.572 188.662 30.589 1.00119.14 N
ATOM 18 C4 C A1480 108.253 187.929 29.521 1.00119.54 C
ATOM 19 N4 C A1480 107.947 186.643 29.716 1.00119.35 N
ATOM 20 C5 C A1480 108.236 188.480 28.204 1.00119.55 C
ATOM 21 C6 C A1480 108.573 189.772 28.067 1.00119.31 C
ATOM 22 P A A1481 113.301 191.362 26.386 1.00120.65 P
ATOM 23 OP1 A A1481 114.397 192.088 25.698 1.00121.10 O
ATOM 24 OP2 A A1481 112.649 190.206 25.708 1.00119.79 O
ATOM 25 O5' A A1481 113.838 190.877 27.811 1.00121.24 O
TER
ATOM 1 O3' C B1480 112.164 192.446 26.735 1.00118.62 O
ATOM 2 P A B1481 113.301 191.362 26.386 1.00120.65 P
ATOM 3 OP1 A B1481 114.397 192.088 25.698 1.00121.10 O
ATOM 4 OP2 A B1481 112.649 190.206 25.708 1.00119.79 O
ATOM 5 O5' A B1481 113.838 190.877 27.811 1.00121.24 O
ATOM 6 C5' A B1481 114.458 191.807 28.731 1.00122.40 C
ATOM 7 C4' A B1481 114.534 191.215 30.126 1.00123.65 C
ATOM 8 O4' A B1481 113.200 190.828 30.556 1.00123.77 O
ATOM 9 C3' A B1481 115.356 189.945 30.293 1.00124.55 C
ATOM 10 O3' A B1481 116.749 190.210 30.443 1.00125.83 O
ATOM 11 C2' A B1481 114.758 189.340 31.557 1.00124.11 C
ATOM 12 O2' A B1481 115.214 189.955 32.746 1.00123.83 O
ATOM 13 C1' A B1481 113.275 189.660 31.363 1.00123.78 C
ATOM 14 N9 A B1481 112.550 188.584 30.683 1.00123.96 N
ATOM 15 C8 A B1481 111.812 188.659 29.526 1.00123.86 C
ATOM 16 N7 A B1481 111.279 187.518 29.163 1.00123.76 N
ATOM 17 C5 A B1481 111.692 186.631 30.145 1.00124.11 C
ATOM 18 C6 A B1481 111.460 185.260 30.335 1.00123.91 C
ATOM 19 N6 A B1481 110.720 184.515 29.511 1.00123.82 N
ATOM 20 N1 A B1481 112.021 184.672 31.414 1.00123.88 N
ATOM 21 C2 A B1481 112.759 185.421 32.241 1.00123.95 C
ATOM 22 N3 A B1481 113.048 186.718 32.172 1.00123.93 N
ATOM 23 C4 A B1481 112.477 187.272 31.087 1.00124.16 C
ATOM 24 P G B1482 117.828 189.139 29.915 1.00126.48 P
ATOM 25 OP1 G B1482 119.153 189.523 30.471 1.00126.16 O
ATOM 26 OP2 G B1482 117.660 188.995 28.443 1.00126.19 O
ATOM 27 O5' G B1482 117.380 187.766 30.589 1.00127.65 O
TER
Atoms:
C2: (108.910,189.964,30.441)
OP1: (108.994,191.735,22.715)
OP2: (108.179,189.519,23.718)
C4: (108.253,187.929,29.521)
O5': (108.934,191.403,25.176)
C3': (110.919,192.003,27.244)
C1': (109.363,191.937,29.000)
O4': (108.735,192.509,27.857)
C5': (109.202,192.781,25.492)
P: (108.275,191.002,23.783)
O2: (109.206,190.673,31.415)
C4': (109.750,192.906,26.894)
C2': (110.872,192.021,28.762)
O2': (111.379,193.222,29.309)
N1: (108.928,190.529,29.153)
N3: (108.572,188.662,30.589)
N4: (107.947,186.643,29.716)
C6: (108.573,189.772,28.067)
C5: (108.236,188.480,28.204)
O3': (112.164,192.446,26.735)
OP1: (108.994,191.735,22.715)
OP2: (108.179,189.519,23.718)
C4: (108.253,187.929,29.521)
O5': (108.934,191.403,25.176)
C3': (110.919,192.003,27.244)
C1': (109.363,191.937,29.000)
O4': (108.735,192.509,27.857)
C5': (109.202,192.781,25.492)
P: (108.275,191.002,23.783)
O2: (109.206,190.673,31.415)
C4': (109.750,192.906,26.894)
C2': (110.872,192.021,28.762)
O2': (111.379,193.222,29.309)
N1: (108.928,190.529,29.153)
N3: (108.572,188.662,30.589)
N4: (107.947,186.643,29.716)
C6: (108.573,189.772,28.067)
C5: (108.236,188.480,28.204)
O3': (112.164,192.446,26.735)
OP1: (114.397,192.088,25.698)
OP2: (112.649,190.206,25.708)
C3': (115.356,189.945,30.293)
C1': (113.275,189.660,31.363)
C5': (114.458,191.807,28.731)
O4': (113.200,190.828,30.556)
C8: (111.812,188.659,29.526)
O2': (115.214,189.955,32.746)
C6: (111.460,185.260,30.335)
C5: (111.692,186.631,30.145)
C4: (112.477,187.272,31.087)
P: (113.301,191.362,26.386)
C4': (114.534,191.215,30.126)
C2': (114.758,189.340,31.557)
C2: (112.759,185.421,32.241)
N1: (112.021,184.672,31.414)
N3: (113.048,186.718,32.172)
N6: (110.720,184.515,29.511)
N7: (111.279,187.518,29.163)
N9: (112.550,188.584,30.683)
O5': (113.838,190.877,27.811)
O3': (116.749,190.210,30.443)
OP2: (112.649,190.206,25.708)
C3': (115.356,189.945,30.293)
C1': (113.275,189.660,31.363)
C5': (114.458,191.807,28.731)
O4': (113.200,190.828,30.556)
C8: (111.812,188.659,29.526)
O2': (115.214,189.955,32.746)
C6: (111.460,185.260,30.335)
C5: (111.692,186.631,30.145)
C4: (112.477,187.272,31.087)
P: (113.301,191.362,26.386)
C4': (114.534,191.215,30.126)
C2': (114.758,189.340,31.557)
C2: (112.759,185.421,32.241)
N1: (112.021,184.672,31.414)
N3: (113.048,186.718,32.172)
N6: (110.720,184.515,29.511)
N7: (111.279,187.518,29.163)
N9: (112.550,188.584,30.683)
O5': (113.838,190.877,27.811)
O3': (116.749,190.210,30.443)
Image (generated by PyMOL):