Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CGP:A8:A7
Extra
PDB:
ATOM 1 O3' G A 7 -19.048 -42.293 3.461 1.00 17.23 O
ATOM 2 P U A 8 -18.133 -42.087 2.155 1.00 19.22 P
ATOM 3 OP1 U A 8 -18.928 -41.297 1.174 1.00 20.96 O
ATOM 4 OP2 U A 8 -17.569 -43.401 1.750 1.00 20.36 O
ATOM 5 O5' U A 8 -16.938 -41.177 2.675 1.00 16.74 O
ATOM 6 C5' U A 8 -17.199 -39.879 3.194 1.00 19.33 C
ATOM 7 C4' U A 8 -15.963 -39.308 3.840 1.00 19.27 C
ATOM 8 O4' U A 8 -15.591 -40.110 4.993 1.00 17.56 O
ATOM 9 C3' U A 8 -14.696 -39.307 3.003 1.00 20.38 C
ATOM 10 O3' U A 8 -14.690 -38.257 2.048 1.00 21.20 O
ATOM 11 C2' U A 8 -13.641 -39.125 4.083 1.00 16.53 C
ATOM 12 O2' U A 8 -13.604 -37.799 4.579 1.00 18.97 O
ATOM 13 C1' U A 8 -14.180 -40.065 5.164 1.00 18.38 C
ATOM 14 N1 U A 8 -13.651 -41.426 4.994 1.00 15.40 N
ATOM 15 C2 U A 8 -12.393 -41.683 5.498 1.00 13.76 C
ATOM 16 O2 U A 8 -11.732 -40.842 6.080 1.00 15.12 O
ATOM 17 N3 U A 8 -11.938 -42.962 5.292 1.00 14.83 N
ATOM 18 C4 U A 8 -12.598 -43.986 4.642 1.00 16.10 C
ATOM 19 O4 U A 8 -12.050 -45.082 4.519 1.00 16.49 O
ATOM 20 C5 U A 8 -13.900 -43.639 4.153 1.00 18.31 C
ATOM 21 C6 U A 8 -14.369 -42.402 4.346 1.00 16.72 C
ATOM 22 P A A 9 -13.854 -38.430 0.686 1.00 21.30 P
ATOM 23 OP1 A A 9 -14.160 -37.235 -0.149 1.00 26.61 O
ATOM 24 OP2 A A 9 -14.060 -39.787 0.125 1.00 21.47 O
ATOM 25 O5' A A 9 -12.338 -38.324 1.153 1.00 20.44 O
TER
ATOM 1 O3' A B 6 -20.220 -48.231 4.581 1.00 19.94 O
ATOM 2 P G B 7 -19.376 -47.380 3.513 1.00 19.59 P
ATOM 3 OP1 G B 7 -20.255 -47.175 2.328 1.00 23.09 O
ATOM 4 OP2 G B 7 -18.043 -48.014 3.338 1.00 21.27 O
ATOM 5 O5' G B 7 -19.144 -45.973 4.225 1.00 17.89 O
ATOM 6 C5' G B 7 -20.235 -45.104 4.512 1.00 16.69 C
ATOM 7 C4' G B 7 -19.737 -43.855 5.198 1.00 16.07 C
ATOM 8 O4' G B 7 -19.194 -44.206 6.499 1.00 16.32 O
ATOM 9 C3' G B 7 -18.590 -43.133 4.512 1.00 18.48 C
ATOM 10 O3' G B 7 -19.048 -42.293 3.461 1.00 17.23 O
ATOM 11 C2' G B 7 -17.999 -42.340 5.668 1.00 14.66 C
ATOM 12 O2' G B 7 -18.783 -41.208 6.004 1.00 15.81 O
ATOM 13 C1' G B 7 -18.082 -43.372 6.793 1.00 15.46 C
ATOM 14 N9 G B 7 -16.889 -44.213 6.839 1.00 15.29 N
ATOM 15 C8 G B 7 -16.755 -45.486 6.343 1.00 16.79 C
ATOM 16 N7 G B 7 -15.559 -45.982 6.521 1.00 15.13 N
ATOM 17 C5 G B 7 -14.866 -44.975 7.178 1.00 12.41 C
ATOM 18 C6 G B 7 -13.526 -44.933 7.636 1.00 13.49 C
ATOM 19 O6 G B 7 -12.654 -45.805 7.544 1.00 15.17 O
ATOM 20 N1 G B 7 -13.235 -43.722 8.255 1.00 14.93 N
ATOM 21 C2 G B 7 -14.117 -42.680 8.410 1.00 13.27 C
ATOM 22 N2 G B 7 -13.649 -41.595 9.035 1.00 16.46 N
ATOM 23 N3 G B 7 -15.369 -42.705 7.983 1.00 12.46 N
ATOM 24 C4 G B 7 -15.673 -43.877 7.383 1.00 12.11 C
ATOM 25 P U B 8 -18.133 -42.087 2.155 1.00 19.22 P
ATOM 26 OP1 U B 8 -18.928 -41.297 1.174 1.00 20.96 O
ATOM 27 OP2 U B 8 -17.569 -43.401 1.750 1.00 20.36 O
ATOM 28 O5' U B 8 -16.938 -41.177 2.675 1.00 16.74 O
TER
ATOM 2 P U A 8 -18.133 -42.087 2.155 1.00 19.22 P
ATOM 3 OP1 U A 8 -18.928 -41.297 1.174 1.00 20.96 O
ATOM 4 OP2 U A 8 -17.569 -43.401 1.750 1.00 20.36 O
ATOM 5 O5' U A 8 -16.938 -41.177 2.675 1.00 16.74 O
ATOM 6 C5' U A 8 -17.199 -39.879 3.194 1.00 19.33 C
ATOM 7 C4' U A 8 -15.963 -39.308 3.840 1.00 19.27 C
ATOM 8 O4' U A 8 -15.591 -40.110 4.993 1.00 17.56 O
ATOM 9 C3' U A 8 -14.696 -39.307 3.003 1.00 20.38 C
ATOM 10 O3' U A 8 -14.690 -38.257 2.048 1.00 21.20 O
ATOM 11 C2' U A 8 -13.641 -39.125 4.083 1.00 16.53 C
ATOM 12 O2' U A 8 -13.604 -37.799 4.579 1.00 18.97 O
ATOM 13 C1' U A 8 -14.180 -40.065 5.164 1.00 18.38 C
ATOM 14 N1 U A 8 -13.651 -41.426 4.994 1.00 15.40 N
ATOM 15 C2 U A 8 -12.393 -41.683 5.498 1.00 13.76 C
ATOM 16 O2 U A 8 -11.732 -40.842 6.080 1.00 15.12 O
ATOM 17 N3 U A 8 -11.938 -42.962 5.292 1.00 14.83 N
ATOM 18 C4 U A 8 -12.598 -43.986 4.642 1.00 16.10 C
ATOM 19 O4 U A 8 -12.050 -45.082 4.519 1.00 16.49 O
ATOM 20 C5 U A 8 -13.900 -43.639 4.153 1.00 18.31 C
ATOM 21 C6 U A 8 -14.369 -42.402 4.346 1.00 16.72 C
ATOM 22 P A A 9 -13.854 -38.430 0.686 1.00 21.30 P
ATOM 23 OP1 A A 9 -14.160 -37.235 -0.149 1.00 26.61 O
ATOM 24 OP2 A A 9 -14.060 -39.787 0.125 1.00 21.47 O
ATOM 25 O5' A A 9 -12.338 -38.324 1.153 1.00 20.44 O
TER
ATOM 1 O3' A B 6 -20.220 -48.231 4.581 1.00 19.94 O
ATOM 2 P G B 7 -19.376 -47.380 3.513 1.00 19.59 P
ATOM 3 OP1 G B 7 -20.255 -47.175 2.328 1.00 23.09 O
ATOM 4 OP2 G B 7 -18.043 -48.014 3.338 1.00 21.27 O
ATOM 5 O5' G B 7 -19.144 -45.973 4.225 1.00 17.89 O
ATOM 6 C5' G B 7 -20.235 -45.104 4.512 1.00 16.69 C
ATOM 7 C4' G B 7 -19.737 -43.855 5.198 1.00 16.07 C
ATOM 8 O4' G B 7 -19.194 -44.206 6.499 1.00 16.32 O
ATOM 9 C3' G B 7 -18.590 -43.133 4.512 1.00 18.48 C
ATOM 10 O3' G B 7 -19.048 -42.293 3.461 1.00 17.23 O
ATOM 11 C2' G B 7 -17.999 -42.340 5.668 1.00 14.66 C
ATOM 12 O2' G B 7 -18.783 -41.208 6.004 1.00 15.81 O
ATOM 13 C1' G B 7 -18.082 -43.372 6.793 1.00 15.46 C
ATOM 14 N9 G B 7 -16.889 -44.213 6.839 1.00 15.29 N
ATOM 15 C8 G B 7 -16.755 -45.486 6.343 1.00 16.79 C
ATOM 16 N7 G B 7 -15.559 -45.982 6.521 1.00 15.13 N
ATOM 17 C5 G B 7 -14.866 -44.975 7.178 1.00 12.41 C
ATOM 18 C6 G B 7 -13.526 -44.933 7.636 1.00 13.49 C
ATOM 19 O6 G B 7 -12.654 -45.805 7.544 1.00 15.17 O
ATOM 20 N1 G B 7 -13.235 -43.722 8.255 1.00 14.93 N
ATOM 21 C2 G B 7 -14.117 -42.680 8.410 1.00 13.27 C
ATOM 22 N2 G B 7 -13.649 -41.595 9.035 1.00 16.46 N
ATOM 23 N3 G B 7 -15.369 -42.705 7.983 1.00 12.46 N
ATOM 24 C4 G B 7 -15.673 -43.877 7.383 1.00 12.11 C
ATOM 25 P U B 8 -18.133 -42.087 2.155 1.00 19.22 P
ATOM 26 OP1 U B 8 -18.928 -41.297 1.174 1.00 20.96 O
ATOM 27 OP2 U B 8 -17.569 -43.401 1.750 1.00 20.36 O
ATOM 28 O5' U B 8 -16.938 -41.177 2.675 1.00 16.74 O
TER
Atoms:
C4: (-12.598,-43.986,4.642)
N3: (-11.938,-42.962,5.292)
OP1: (-18.928,-41.297,1.174)
OP2: (-17.569,-43.401,1.750)
C2: (-12.393,-41.683,5.498)
C1': (-14.180,-40.065,5.164)
C3': (-14.696,-39.307,3.003)
O5': (-16.938,-41.177,2.675)
O4': (-15.591,-40.110,4.993)
C5': (-17.199,-39.879,3.194)
P: (-18.133,-42.087,2.155)
C4': (-15.963,-39.308,3.840)
C2': (-13.641,-39.125,4.083)
O2': (-13.604,-37.799,4.579)
N1: (-13.651,-41.426,4.994)
O4: (-12.050,-45.082,4.519)
O2: (-11.732,-40.842,6.080)
C6: (-14.369,-42.402,4.346)
C5: (-13.900,-43.639,4.153)
O3': (-14.690,-38.257,2.048)
N3: (-11.938,-42.962,5.292)
OP1: (-18.928,-41.297,1.174)
OP2: (-17.569,-43.401,1.750)
C2: (-12.393,-41.683,5.498)
C1': (-14.180,-40.065,5.164)
C3': (-14.696,-39.307,3.003)
O5': (-16.938,-41.177,2.675)
O4': (-15.591,-40.110,4.993)
C5': (-17.199,-39.879,3.194)
P: (-18.133,-42.087,2.155)
C4': (-15.963,-39.308,3.840)
C2': (-13.641,-39.125,4.083)
O2': (-13.604,-37.799,4.579)
N1: (-13.651,-41.426,4.994)
O4: (-12.050,-45.082,4.519)
O2: (-11.732,-40.842,6.080)
C6: (-14.369,-42.402,4.346)
C5: (-13.900,-43.639,4.153)
O3': (-14.690,-38.257,2.048)
OP1: (-20.255,-47.175,2.328)
OP2: (-18.043,-48.014,3.338)
C3': (-18.590,-43.133,4.512)
C1': (-18.082,-43.372,6.793)
C5': (-20.235,-45.104,4.512)
O6: (-12.654,-45.805,7.544)
O4': (-19.194,-44.206,6.499)
C8: (-16.755,-45.486,6.343)
C2: (-14.117,-42.680,8.410)
C6: (-13.526,-44.933,7.636)
C5: (-14.866,-44.975,7.178)
C4: (-15.673,-43.877,7.383)
P: (-19.376,-47.380,3.513)
C4': (-19.737,-43.855,5.198)
C2': (-17.999,-42.340,5.668)
O2': (-18.783,-41.208,6.004)
N1: (-13.235,-43.722,8.255)
N2: (-13.649,-41.595,9.035)
N3: (-15.369,-42.705,7.983)
N7: (-15.559,-45.982,6.521)
N9: (-16.889,-44.213,6.839)
O5': (-19.144,-45.973,4.225)
O3': (-19.048,-42.293,3.461)
OP2: (-18.043,-48.014,3.338)
C3': (-18.590,-43.133,4.512)
C1': (-18.082,-43.372,6.793)
C5': (-20.235,-45.104,4.512)
O6: (-12.654,-45.805,7.544)
O4': (-19.194,-44.206,6.499)
C8: (-16.755,-45.486,6.343)
C2: (-14.117,-42.680,8.410)
C6: (-13.526,-44.933,7.636)
C5: (-14.866,-44.975,7.178)
C4: (-15.673,-43.877,7.383)
P: (-19.376,-47.380,3.513)
C4': (-19.737,-43.855,5.198)
C2': (-17.999,-42.340,5.668)
O2': (-18.783,-41.208,6.004)
N1: (-13.235,-43.722,8.255)
N2: (-13.649,-41.595,9.035)
N3: (-15.369,-42.705,7.983)
N7: (-15.559,-45.982,6.521)
N9: (-16.889,-44.213,6.839)
O5': (-19.144,-45.973,4.225)
O3': (-19.048,-42.293,3.461)
Image (generated by PyMOL):