Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:C17:C19
Extra
PDB:
ATOM 1 O3' C A 16 16.428 -8.077 12.961 1.00 26.93 O
ATOM 2 P C A 17 17.693 -8.247 13.923 1.00 25.98 P
ATOM 3 OP1 C A 17 18.880 -8.385 13.047 1.00 26.19 O
ATOM 4 OP2 C A 17 17.379 -9.319 14.902 1.00 28.29 O
ATOM 5 O5' C A 17 17.752 -6.847 14.688 1.00 27.30 O
ATOM 6 C5' C A 17 17.961 -5.633 13.968 1.00 24.44 C
ATOM 7 C4' C A 17 17.714 -4.426 14.853 1.00 21.00 C
ATOM 8 O4' C A 17 16.311 -4.313 15.184 1.00 18.95 O
ATOM 9 C3' C A 17 18.417 -4.396 16.192 1.00 19.07 C
ATOM 10 O3' C A 17 19.751 -3.936 15.989 1.00 18.68 O
ATOM 11 C2' C A 17 17.571 -3.384 16.974 1.00 18.69 C
ATOM 12 O2' C A 17 17.918 -2.044 16.684 1.00 21.55 O
ATOM 13 C1' C A 17 16.171 -3.619 16.403 1.00 16.84 C
ATOM 14 N1 C A 17 15.186 -4.335 17.232 1.00 15.20 N
ATOM 15 C2 C A 17 14.388 -3.604 18.116 1.00 12.91 C
ATOM 16 O2 C A 17 14.605 -2.401 18.251 1.00 14.33 O
ATOM 17 N3 C A 17 13.403 -4.228 18.802 1.00 11.01 N
ATOM 18 C4 C A 17 13.216 -5.538 18.649 1.00 13.29 C
ATOM 19 N4 C A 17 12.217 -6.115 19.330 1.00 11.52 N
ATOM 20 C5 C A 17 14.043 -6.320 17.787 1.00 13.51 C
ATOM 21 C6 C A 17 15.011 -5.684 17.106 1.00 14.48 C
ATOM 22 P G A 18 20.993 -4.772 16.578 1.00 20.55 P
ATOM 23 OP1 G A 18 22.191 -4.424 15.792 1.00 19.98 O
ATOM 24 OP2 G A 18 20.598 -6.185 16.712 1.00 22.78 O
ATOM 25 O5' G A 18 21.224 -4.178 18.033 1.00 19.90 O
TER
ATOM 1 O3' G B 18 20.973 -2.323 21.513 1.00 16.83 O
ATOM 2 P A B 19 20.860 -0.740 21.598 1.00 17.02 P
ATOM 3 OP1 A B 19 20.995 -0.151 20.242 1.00 15.96 O
ATOM 4 OP2 A B 19 21.761 -0.297 22.692 1.00 17.91 O
ATOM 5 O5' A B 19 19.340 -0.588 22.038 1.00 17.27 O
ATOM 6 C5' A B 19 18.896 0.459 22.880 1.00 15.77 C
ATOM 7 C4' A B 19 17.503 0.152 23.362 1.00 14.59 C
ATOM 8 O4' A B 19 16.737 -0.271 22.202 1.00 15.28 O
ATOM 9 C3' A B 19 17.393 -1.019 24.328 1.00 14.96 C
ATOM 10 O3' A B 19 17.569 -0.578 25.675 1.00 15.45 O
ATOM 11 C2' A B 19 15.972 -1.508 24.077 1.00 15.12 C
ATOM 12 O2' A B 19 14.995 -0.737 24.743 1.00 17.89 O
ATOM 13 C1' A B 19 15.843 -1.309 22.564 1.00 14.85 C
ATOM 14 N9 A B 19 16.200 -2.502 21.798 1.00 12.89 N
ATOM 15 C8 A B 19 17.203 -2.655 20.865 1.00 14.25 C
ATOM 16 N7 A B 19 17.300 -3.873 20.388 1.00 13.52 N
ATOM 17 C5 A B 19 16.288 -4.565 21.037 1.00 12.47 C
ATOM 18 C6 A B 19 15.867 -5.906 20.977 1.00 13.36 C
ATOM 19 N6 A B 19 16.440 -6.828 20.196 1.00 14.56 N
ATOM 20 N1 A B 19 14.823 -6.276 21.761 1.00 12.10 N
ATOM 21 C2 A B 19 14.251 -5.352 22.547 1.00 10.28 C
ATOM 22 N3 A B 19 14.554 -4.063 22.690 1.00 10.22 N
ATOM 23 C4 A B 19 15.595 -3.730 21.900 1.00 12.08 C
ATOM 24 P A B 20 18.396 -1.480 26.719 1.00 15.64 P
ATOM 25 OP1 A B 20 18.233 -0.887 28.074 1.00 15.75 O
ATOM 26 OP2 A B 20 19.763 -1.737 26.181 1.00 16.73 O
ATOM 27 O5' A B 20 17.617 -2.861 26.751 1.00 16.27 O
TER
ATOM 2 P C A 17 17.693 -8.247 13.923 1.00 25.98 P
ATOM 3 OP1 C A 17 18.880 -8.385 13.047 1.00 26.19 O
ATOM 4 OP2 C A 17 17.379 -9.319 14.902 1.00 28.29 O
ATOM 5 O5' C A 17 17.752 -6.847 14.688 1.00 27.30 O
ATOM 6 C5' C A 17 17.961 -5.633 13.968 1.00 24.44 C
ATOM 7 C4' C A 17 17.714 -4.426 14.853 1.00 21.00 C
ATOM 8 O4' C A 17 16.311 -4.313 15.184 1.00 18.95 O
ATOM 9 C3' C A 17 18.417 -4.396 16.192 1.00 19.07 C
ATOM 10 O3' C A 17 19.751 -3.936 15.989 1.00 18.68 O
ATOM 11 C2' C A 17 17.571 -3.384 16.974 1.00 18.69 C
ATOM 12 O2' C A 17 17.918 -2.044 16.684 1.00 21.55 O
ATOM 13 C1' C A 17 16.171 -3.619 16.403 1.00 16.84 C
ATOM 14 N1 C A 17 15.186 -4.335 17.232 1.00 15.20 N
ATOM 15 C2 C A 17 14.388 -3.604 18.116 1.00 12.91 C
ATOM 16 O2 C A 17 14.605 -2.401 18.251 1.00 14.33 O
ATOM 17 N3 C A 17 13.403 -4.228 18.802 1.00 11.01 N
ATOM 18 C4 C A 17 13.216 -5.538 18.649 1.00 13.29 C
ATOM 19 N4 C A 17 12.217 -6.115 19.330 1.00 11.52 N
ATOM 20 C5 C A 17 14.043 -6.320 17.787 1.00 13.51 C
ATOM 21 C6 C A 17 15.011 -5.684 17.106 1.00 14.48 C
ATOM 22 P G A 18 20.993 -4.772 16.578 1.00 20.55 P
ATOM 23 OP1 G A 18 22.191 -4.424 15.792 1.00 19.98 O
ATOM 24 OP2 G A 18 20.598 -6.185 16.712 1.00 22.78 O
ATOM 25 O5' G A 18 21.224 -4.178 18.033 1.00 19.90 O
TER
ATOM 1 O3' G B 18 20.973 -2.323 21.513 1.00 16.83 O
ATOM 2 P A B 19 20.860 -0.740 21.598 1.00 17.02 P
ATOM 3 OP1 A B 19 20.995 -0.151 20.242 1.00 15.96 O
ATOM 4 OP2 A B 19 21.761 -0.297 22.692 1.00 17.91 O
ATOM 5 O5' A B 19 19.340 -0.588 22.038 1.00 17.27 O
ATOM 6 C5' A B 19 18.896 0.459 22.880 1.00 15.77 C
ATOM 7 C4' A B 19 17.503 0.152 23.362 1.00 14.59 C
ATOM 8 O4' A B 19 16.737 -0.271 22.202 1.00 15.28 O
ATOM 9 C3' A B 19 17.393 -1.019 24.328 1.00 14.96 C
ATOM 10 O3' A B 19 17.569 -0.578 25.675 1.00 15.45 O
ATOM 11 C2' A B 19 15.972 -1.508 24.077 1.00 15.12 C
ATOM 12 O2' A B 19 14.995 -0.737 24.743 1.00 17.89 O
ATOM 13 C1' A B 19 15.843 -1.309 22.564 1.00 14.85 C
ATOM 14 N9 A B 19 16.200 -2.502 21.798 1.00 12.89 N
ATOM 15 C8 A B 19 17.203 -2.655 20.865 1.00 14.25 C
ATOM 16 N7 A B 19 17.300 -3.873 20.388 1.00 13.52 N
ATOM 17 C5 A B 19 16.288 -4.565 21.037 1.00 12.47 C
ATOM 18 C6 A B 19 15.867 -5.906 20.977 1.00 13.36 C
ATOM 19 N6 A B 19 16.440 -6.828 20.196 1.00 14.56 N
ATOM 20 N1 A B 19 14.823 -6.276 21.761 1.00 12.10 N
ATOM 21 C2 A B 19 14.251 -5.352 22.547 1.00 10.28 C
ATOM 22 N3 A B 19 14.554 -4.063 22.690 1.00 10.22 N
ATOM 23 C4 A B 19 15.595 -3.730 21.900 1.00 12.08 C
ATOM 24 P A B 20 18.396 -1.480 26.719 1.00 15.64 P
ATOM 25 OP1 A B 20 18.233 -0.887 28.074 1.00 15.75 O
ATOM 26 OP2 A B 20 19.763 -1.737 26.181 1.00 16.73 O
ATOM 27 O5' A B 20 17.617 -2.861 26.751 1.00 16.27 O
TER
Atoms:
C2: (14.388,-3.604,18.116)
OP1: (18.880,-8.385,13.047)
OP2: (17.379,-9.319,14.902)
C4: (13.216,-5.538,18.649)
O5': (17.752,-6.847,14.688)
C3': (18.417,-4.396,16.192)
C1': (16.171,-3.619,16.403)
O4': (16.311,-4.313,15.184)
C5': (17.961,-5.633,13.968)
P: (17.693,-8.247,13.923)
O2: (14.605,-2.401,18.251)
C4': (17.714,-4.426,14.853)
C2': (17.571,-3.384,16.974)
O2': (17.918,-2.044,16.684)
N1: (15.186,-4.335,17.232)
N3: (13.403,-4.228,18.802)
N4: (12.217,-6.115,19.330)
C6: (15.011,-5.684,17.106)
C5: (14.043,-6.320,17.787)
O3': (19.751,-3.936,15.989)
OP1: (18.880,-8.385,13.047)
OP2: (17.379,-9.319,14.902)
C4: (13.216,-5.538,18.649)
O5': (17.752,-6.847,14.688)
C3': (18.417,-4.396,16.192)
C1': (16.171,-3.619,16.403)
O4': (16.311,-4.313,15.184)
C5': (17.961,-5.633,13.968)
P: (17.693,-8.247,13.923)
O2: (14.605,-2.401,18.251)
C4': (17.714,-4.426,14.853)
C2': (17.571,-3.384,16.974)
O2': (17.918,-2.044,16.684)
N1: (15.186,-4.335,17.232)
N3: (13.403,-4.228,18.802)
N4: (12.217,-6.115,19.330)
C6: (15.011,-5.684,17.106)
C5: (14.043,-6.320,17.787)
O3': (19.751,-3.936,15.989)
OP1: (20.995,-0.151,20.242)
OP2: (21.761,-0.297,22.692)
C3': (17.393,-1.019,24.328)
C1': (15.843,-1.309,22.564)
C5': (18.896,0.459,22.880)
O4': (16.737,-0.271,22.202)
C8: (17.203,-2.655,20.865)
O2': (14.995,-0.737,24.743)
C6: (15.867,-5.906,20.977)
C5: (16.288,-4.565,21.037)
C4: (15.595,-3.730,21.900)
P: (20.860,-0.740,21.598)
C4': (17.503,0.152,23.362)
C2': (15.972,-1.508,24.077)
C2: (14.251,-5.352,22.547)
N1: (14.823,-6.276,21.761)
N3: (14.554,-4.063,22.690)
N6: (16.440,-6.828,20.196)
N7: (17.300,-3.873,20.388)
N9: (16.200,-2.502,21.798)
O5': (19.340,-0.588,22.038)
O3': (17.569,-0.578,25.675)
OP2: (21.761,-0.297,22.692)
C3': (17.393,-1.019,24.328)
C1': (15.843,-1.309,22.564)
C5': (18.896,0.459,22.880)
O4': (16.737,-0.271,22.202)
C8: (17.203,-2.655,20.865)
O2': (14.995,-0.737,24.743)
C6: (15.867,-5.906,20.977)
C5: (16.288,-4.565,21.037)
C4: (15.595,-3.730,21.900)
P: (20.860,-0.740,21.598)
C4': (17.503,0.152,23.362)
C2': (15.972,-1.508,24.077)
C2: (14.251,-5.352,22.547)
N1: (14.823,-6.276,21.761)
N3: (14.554,-4.063,22.690)
N6: (16.440,-6.828,20.196)
N7: (17.300,-3.873,20.388)
N9: (16.200,-2.502,21.798)
O5': (19.340,-0.588,22.038)
O3': (17.569,-0.578,25.675)
Image (generated by PyMOL):