ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A2353:A2596

Extra

PDB:
ATOM 1 O3' U A2352 94.793 -59.094 42.830 1.00 55.25 O
ATOM 2 P G A2353 96.257 -59.437 43.412 1.00 45.44 P
ATOM 3 OP1 G A2353 96.150 -59.374 44.883 1.00 61.17 O
ATOM 4 OP2 G A2353 97.240 -58.543 42.716 1.00 49.90 O
ATOM 5 O5' G A2353 96.479 -60.945 42.962 1.00 45.45 O
ATOM 6 C5' G A2353 95.730 -61.996 43.553 1.00 47.88 C
ATOM 7 C4' G A2353 96.298 -63.347 43.204 1.00 47.68 C
ATOM 8 O4' G A2353 96.248 -63.545 41.767 1.00 45.44 O
ATOM 9 C3' G A2353 97.765 -63.559 43.529 1.00 56.33 C
ATOM 10 O3' G A2353 98.020 -63.804 44.906 1.00 55.45 O
ATOM 11 C2' G A2353 98.121 -64.719 42.621 1.00 44.69 C
ATOM 12 O2' G A2353 97.614 -65.934 43.153 1.00 43.62 O
ATOM 13 C1' G A2353 97.334 -64.352 41.360 1.00 40.05 C
ATOM 14 N9 G A2353 98.153 -63.577 40.414 1.00 31.92 N
ATOM 15 C8 G A2353 98.025 -62.242 40.161 1.00 34.26 C
ATOM 16 N7 G A2353 98.889 -61.786 39.284 1.00 35.00 N
ATOM 17 C5 G A2353 99.637 -62.896 38.914 1.00 36.27 C
ATOM 18 C6 G A2353 100.721 -63.016 37.996 1.00 33.60 C
ATOM 19 O6 G A2353 101.276 -62.159 37.300 1.00 31.53 O
ATOM 20 N1 G A2353 101.180 -64.313 37.930 1.00 33.51 N
ATOM 21 C2 G A2353 100.670 -65.364 38.647 1.00 42.30 C
ATOM 22 N2 G A2353 101.282 -66.539 38.416 1.00 44.66 N
ATOM 23 N3 G A2353 99.658 -65.279 39.512 1.00 38.34 N
ATOM 24 C4 G A2353 99.186 -64.016 39.600 1.00 36.09 C
ATOM 25 P G A2354 99.304 -63.138 45.611 1.00 39.89 P
ATOM 26 OP1 G A2354 99.012 -63.079 47.058 1.00 80.08 O
ATOM 27 OP2 G A2354 99.609 -61.883 44.892 1.00 58.32 O
ATOM 28 O5' G A2354 100.444 -64.202 45.327 1.00 44.34 O
TER

ATOM 1 O3' A B2595 97.408 -68.769 42.897 1.00 51.22 O
ATOM 2 P A B2596 96.258 -69.509 43.756 1.00 53.00 P
ATOM 3 OP1 A B2596 96.269 -68.902 45.113 1.00 42.22 O
ATOM 4 OP2 A B2596 96.461 -70.981 43.621 1.00 54.57 O
ATOM 5 O5' A B2596 94.944 -69.079 43.003 1.00 52.92 O
ATOM 6 C5' A B2596 94.809 -69.261 41.612 1.00 54.56 C
ATOM 7 C4' A B2596 93.688 -68.425 41.075 1.00 52.41 C
ATOM 8 O4' A B2596 94.084 -67.040 41.056 1.00 53.29 O
ATOM 9 C3' A B2596 93.259 -68.722 39.659 1.00 42.32 C
ATOM 10 O3' A B2596 92.347 -69.802 39.599 1.00 49.21 O
ATOM 11 C2' A B2596 92.648 -67.406 39.205 1.00 49.46 C
ATOM 12 O2' A B2596 91.282 -67.346 39.574 1.00 64.34 O
ATOM 13 C1' A B2596 93.417 -66.371 40.031 1.00 49.37 C
ATOM 14 N9 A B2596 94.396 -65.620 39.230 1.00 37.99 N
ATOM 15 C8 A B2596 94.466 -64.261 39.153 1.00 38.36 C
ATOM 16 N7 A B2596 95.402 -63.820 38.363 1.00 35.40 N
ATOM 17 C5 A B2596 95.992 -64.958 37.879 1.00 33.73 C
ATOM 18 C6 A B2596 97.050 -65.127 36.993 1.00 36.14 C
ATOM 19 N6 A B2596 97.734 -64.141 36.412 1.00 33.66 N
ATOM 20 N1 A B2596 97.381 -66.393 36.724 1.00 40.95 N
ATOM 21 C2 A B2596 96.705 -67.400 37.307 1.00 43.91 C
ATOM 22 N3 A B2596 95.692 -67.362 38.163 1.00 41.14 N
ATOM 23 C4 A B2596 95.384 -66.083 38.408 1.00 36.94 C
ATOM 24 P G B2597 92.765 -71.197 38.916 1.00 53.51 P
ATOM 25 OP1 G B2597 91.601 -71.676 38.131 1.00 80.07 O
ATOM 26 OP2 G B2597 93.301 -72.069 39.983 1.00 72.05 O
ATOM 27 O5' G B2597 93.933 -70.764 37.929 1.00 57.57 O
TER

Atoms:
OP1: (96.150,-59.374,44.883)
OP2: (97.240,-58.543,42.716)
C3': (97.765,-63.559,43.529)
C1': (97.334,-64.352,41.360)
C5': (95.730,-61.996,43.553)
O6: (101.276,-62.159,37.300)
O4': (96.248,-63.545,41.767)
C8: (98.025,-62.242,40.161)
C2: (100.670,-65.364,38.647)
C6: (100.721,-63.016,37.996)
C5: (99.637,-62.896,38.914)
C4: (99.186,-64.016,39.600)
P: (96.257,-59.437,43.412)
C4': (96.298,-63.347,43.204)
C2': (98.121,-64.719,42.621)
O2': (97.614,-65.934,43.153)
N1: (101.180,-64.313,37.930)
N2: (101.282,-66.539,38.416)
N3: (99.658,-65.279,39.512)
N7: (98.889,-61.786,39.284)
N9: (98.153,-63.577,40.414)
O5': (96.479,-60.945,42.962)
O3': (98.020,-63.804,44.906)
OP1: (96.269,-68.902,45.113)
OP2: (96.461,-70.981,43.621)
C3': (93.259,-68.722,39.659)
C1': (93.417,-66.371,40.031)
C5': (94.809,-69.261,41.612)
O4': (94.084,-67.040,41.056)
C8: (94.466,-64.261,39.153)
O2': (91.282,-67.346,39.574)
C6: (97.050,-65.127,36.993)
C5: (95.992,-64.958,37.879)
C4: (95.384,-66.083,38.408)
P: (96.258,-69.509,43.756)
C4': (93.688,-68.425,41.075)
C2': (92.648,-67.406,39.205)
C2: (96.705,-67.400,37.307)
N1: (97.381,-66.393,36.724)
N3: (95.692,-67.362,38.163)
N6: (97.734,-64.141,36.412)
N7: (95.402,-63.820,38.363)
N9: (94.396,-65.620,39.230)
O5': (94.944,-69.079,43.003)
O3': (92.347,-69.802,39.599)
Image (generated by PyMOL):
PyMOL image
show in jmol