Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A428:A429
Extra
PDB:
ATOM 1 O3' A A 427 56.735 116.323 35.592 1.00 42.59 O
ATOM 2 P C A 428 55.456 117.182 36.042 1.00 42.46 P
ATOM 3 OP1 C A 428 55.095 116.744 37.400 1.00 42.18 O
ATOM 4 OP2 C A 428 54.433 117.158 34.976 1.00 46.68 O
ATOM 5 O5' C A 428 56.008 118.665 36.170 1.00 44.45 O
ATOM 6 C5' C A 428 57.074 118.976 37.102 1.00 47.01 C
ATOM 7 C4' C A 428 57.556 120.380 36.878 1.00 48.28 C
ATOM 8 O4' C A 428 58.013 120.508 35.507 1.00 48.43 O
ATOM 9 C3' C A 428 56.473 121.429 37.018 1.00 49.88 C
ATOM 10 O3' C A 428 56.327 121.752 38.400 1.00 52.76 O
ATOM 11 C2' C A 428 57.013 122.564 36.155 1.00 49.08 C
ATOM 12 O2' C A 428 58.032 123.296 36.800 1.00 49.37 O
ATOM 13 C1' C A 428 57.664 121.787 35.006 1.00 47.79 C
ATOM 14 N1 C A 428 56.850 121.601 33.784 1.00 46.45 N
ATOM 15 C2 C A 428 56.963 122.534 32.753 1.00 45.90 C
ATOM 16 O2 C A 428 57.712 123.512 32.903 1.00 46.30 O
ATOM 17 N3 C A 428 56.263 122.348 31.612 1.00 45.44 N
ATOM 18 C4 C A 428 55.483 121.282 31.475 1.00 45.20 C
ATOM 19 N4 C A 428 54.833 121.135 30.328 1.00 45.82 N
ATOM 20 C5 C A 428 55.336 120.320 32.510 1.00 45.73 C
ATOM 21 C6 C A 428 56.020 120.523 33.643 1.00 45.74 C
ATOM 22 P A A 429 54.913 122.283 38.956 1.00 55.47 P
ATOM 23 OP1 A A 429 55.016 122.498 40.419 1.00 55.09 O
ATOM 24 OP2 A A 429 53.844 121.395 38.424 1.00 55.75 O
ATOM 25 O5' A A 429 54.758 123.714 38.280 1.00 54.05 O
TER
ATOM 1 O3' C B 428 56.327 121.752 38.400 1.00 52.76 O
ATOM 2 P A B 429 54.913 122.283 38.956 1.00 55.47 P
ATOM 3 OP1 A B 429 55.016 122.498 40.419 1.00 55.09 O
ATOM 4 OP2 A B 429 53.844 121.395 38.424 1.00 55.75 O
ATOM 5 O5' A B 429 54.758 123.714 38.280 1.00 54.05 O
ATOM 6 C5' A B 429 55.710 124.769 38.522 1.00 55.03 C
ATOM 7 C4' A B 429 55.394 125.950 37.633 1.00 55.24 C
ATOM 8 O4' A B 429 55.388 125.485 36.254 1.00 56.53 O
ATOM 9 C3' A B 429 54.021 126.587 37.851 1.00 55.16 C
ATOM 10 O3' A B 429 54.061 127.960 37.484 1.00 54.20 O
ATOM 11 C2' A B 429 53.135 125.787 36.901 1.00 55.56 C
ATOM 12 O2' A B 429 51.932 126.388 36.473 1.00 53.58 O
ATOM 13 C1' A B 429 54.074 125.565 35.722 1.00 57.50 C
ATOM 14 N9 A B 429 53.767 124.293 35.084 1.00 60.67 N
ATOM 15 C8 A B 429 53.771 123.038 35.653 1.00 60.94 C
ATOM 16 N7 A B 429 53.424 122.084 34.830 1.00 61.68 N
ATOM 17 C5 A B 429 53.169 122.752 33.642 1.00 62.48 C
ATOM 18 C6 A B 429 52.751 122.303 32.399 1.00 62.87 C
ATOM 19 N6 A B 429 52.460 121.027 32.150 1.00 63.66 N
ATOM 20 N1 A B 429 52.630 123.210 31.406 1.00 63.73 N
ATOM 21 C2 A B 429 52.889 124.493 31.671 1.00 63.65 C
ATOM 22 N3 A B 429 53.263 125.052 32.818 1.00 63.37 N
ATOM 23 C4 A B 429 53.392 124.111 33.777 1.00 62.31 C
ATOM 24 P A B 430 53.398 129.063 38.441 1.00 53.08 P
ATOM 25 OP1 A B 430 54.031 128.945 39.783 1.00 53.62 O
ATOM 26 OP2 A B 430 51.931 128.983 38.324 1.00 54.14 O
ATOM 27 O5' A B 430 53.815 130.442 37.769 1.00 52.67 O
TER
ATOM 2 P C A 428 55.456 117.182 36.042 1.00 42.46 P
ATOM 3 OP1 C A 428 55.095 116.744 37.400 1.00 42.18 O
ATOM 4 OP2 C A 428 54.433 117.158 34.976 1.00 46.68 O
ATOM 5 O5' C A 428 56.008 118.665 36.170 1.00 44.45 O
ATOM 6 C5' C A 428 57.074 118.976 37.102 1.00 47.01 C
ATOM 7 C4' C A 428 57.556 120.380 36.878 1.00 48.28 C
ATOM 8 O4' C A 428 58.013 120.508 35.507 1.00 48.43 O
ATOM 9 C3' C A 428 56.473 121.429 37.018 1.00 49.88 C
ATOM 10 O3' C A 428 56.327 121.752 38.400 1.00 52.76 O
ATOM 11 C2' C A 428 57.013 122.564 36.155 1.00 49.08 C
ATOM 12 O2' C A 428 58.032 123.296 36.800 1.00 49.37 O
ATOM 13 C1' C A 428 57.664 121.787 35.006 1.00 47.79 C
ATOM 14 N1 C A 428 56.850 121.601 33.784 1.00 46.45 N
ATOM 15 C2 C A 428 56.963 122.534 32.753 1.00 45.90 C
ATOM 16 O2 C A 428 57.712 123.512 32.903 1.00 46.30 O
ATOM 17 N3 C A 428 56.263 122.348 31.612 1.00 45.44 N
ATOM 18 C4 C A 428 55.483 121.282 31.475 1.00 45.20 C
ATOM 19 N4 C A 428 54.833 121.135 30.328 1.00 45.82 N
ATOM 20 C5 C A 428 55.336 120.320 32.510 1.00 45.73 C
ATOM 21 C6 C A 428 56.020 120.523 33.643 1.00 45.74 C
ATOM 22 P A A 429 54.913 122.283 38.956 1.00 55.47 P
ATOM 23 OP1 A A 429 55.016 122.498 40.419 1.00 55.09 O
ATOM 24 OP2 A A 429 53.844 121.395 38.424 1.00 55.75 O
ATOM 25 O5' A A 429 54.758 123.714 38.280 1.00 54.05 O
TER
ATOM 1 O3' C B 428 56.327 121.752 38.400 1.00 52.76 O
ATOM 2 P A B 429 54.913 122.283 38.956 1.00 55.47 P
ATOM 3 OP1 A B 429 55.016 122.498 40.419 1.00 55.09 O
ATOM 4 OP2 A B 429 53.844 121.395 38.424 1.00 55.75 O
ATOM 5 O5' A B 429 54.758 123.714 38.280 1.00 54.05 O
ATOM 6 C5' A B 429 55.710 124.769 38.522 1.00 55.03 C
ATOM 7 C4' A B 429 55.394 125.950 37.633 1.00 55.24 C
ATOM 8 O4' A B 429 55.388 125.485 36.254 1.00 56.53 O
ATOM 9 C3' A B 429 54.021 126.587 37.851 1.00 55.16 C
ATOM 10 O3' A B 429 54.061 127.960 37.484 1.00 54.20 O
ATOM 11 C2' A B 429 53.135 125.787 36.901 1.00 55.56 C
ATOM 12 O2' A B 429 51.932 126.388 36.473 1.00 53.58 O
ATOM 13 C1' A B 429 54.074 125.565 35.722 1.00 57.50 C
ATOM 14 N9 A B 429 53.767 124.293 35.084 1.00 60.67 N
ATOM 15 C8 A B 429 53.771 123.038 35.653 1.00 60.94 C
ATOM 16 N7 A B 429 53.424 122.084 34.830 1.00 61.68 N
ATOM 17 C5 A B 429 53.169 122.752 33.642 1.00 62.48 C
ATOM 18 C6 A B 429 52.751 122.303 32.399 1.00 62.87 C
ATOM 19 N6 A B 429 52.460 121.027 32.150 1.00 63.66 N
ATOM 20 N1 A B 429 52.630 123.210 31.406 1.00 63.73 N
ATOM 21 C2 A B 429 52.889 124.493 31.671 1.00 63.65 C
ATOM 22 N3 A B 429 53.263 125.052 32.818 1.00 63.37 N
ATOM 23 C4 A B 429 53.392 124.111 33.777 1.00 62.31 C
ATOM 24 P A B 430 53.398 129.063 38.441 1.00 53.08 P
ATOM 25 OP1 A B 430 54.031 128.945 39.783 1.00 53.62 O
ATOM 26 OP2 A B 430 51.931 128.983 38.324 1.00 54.14 O
ATOM 27 O5' A B 430 53.815 130.442 37.769 1.00 52.67 O
TER
Atoms:
C2: (56.963,122.534,32.753)
OP1: (55.095,116.744,37.400)
OP2: (54.433,117.158,34.976)
C4: (55.483,121.282,31.475)
O5': (56.008,118.665,36.170)
C3': (56.473,121.429,37.018)
C1': (57.664,121.787,35.006)
O4': (58.013,120.508,35.507)
C5': (57.074,118.976,37.102)
P: (55.456,117.182,36.042)
O2: (57.712,123.512,32.903)
C4': (57.556,120.380,36.878)
C2': (57.013,122.564,36.155)
O2': (58.032,123.296,36.800)
N1: (56.850,121.601,33.784)
N3: (56.263,122.348,31.612)
N4: (54.833,121.135,30.328)
C6: (56.020,120.523,33.643)
C5: (55.336,120.320,32.510)
O3': (56.327,121.752,38.400)
OP1: (55.095,116.744,37.400)
OP2: (54.433,117.158,34.976)
C4: (55.483,121.282,31.475)
O5': (56.008,118.665,36.170)
C3': (56.473,121.429,37.018)
C1': (57.664,121.787,35.006)
O4': (58.013,120.508,35.507)
C5': (57.074,118.976,37.102)
P: (55.456,117.182,36.042)
O2: (57.712,123.512,32.903)
C4': (57.556,120.380,36.878)
C2': (57.013,122.564,36.155)
O2': (58.032,123.296,36.800)
N1: (56.850,121.601,33.784)
N3: (56.263,122.348,31.612)
N4: (54.833,121.135,30.328)
C6: (56.020,120.523,33.643)
C5: (55.336,120.320,32.510)
O3': (56.327,121.752,38.400)
OP1: (55.016,122.498,40.419)
OP2: (53.844,121.395,38.424)
C3': (54.021,126.587,37.851)
C1': (54.074,125.565,35.722)
C5': (55.710,124.769,38.522)
O4': (55.388,125.485,36.254)
C8: (53.771,123.038,35.653)
O2': (51.932,126.388,36.473)
C6: (52.751,122.303,32.399)
C5: (53.169,122.752,33.642)
C4: (53.392,124.111,33.777)
P: (54.913,122.283,38.956)
C4': (55.394,125.950,37.633)
C2': (53.135,125.787,36.901)
C2: (52.889,124.493,31.671)
N1: (52.630,123.210,31.406)
N3: (53.263,125.052,32.818)
N6: (52.460,121.027,32.150)
N7: (53.424,122.084,34.830)
N9: (53.767,124.293,35.084)
O5': (54.758,123.714,38.280)
O3': (54.061,127.960,37.484)
OP2: (53.844,121.395,38.424)
C3': (54.021,126.587,37.851)
C1': (54.074,125.565,35.722)
C5': (55.710,124.769,38.522)
O4': (55.388,125.485,36.254)
C8: (53.771,123.038,35.653)
O2': (51.932,126.388,36.473)
C6: (52.751,122.303,32.399)
C5: (53.169,122.752,33.642)
C4: (53.392,124.111,33.777)
P: (54.913,122.283,38.956)
C4': (55.394,125.950,37.633)
C2': (53.135,125.787,36.901)
C2: (52.889,124.493,31.671)
N1: (52.630,123.210,31.406)
N3: (53.263,125.052,32.818)
N6: (52.460,121.027,32.150)
N7: (53.424,122.084,34.830)
N9: (53.767,124.293,35.084)
O5': (54.758,123.714,38.280)
O3': (54.061,127.960,37.484)
Image (generated by PyMOL):