ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:01006:01005

Extra

PDB:
ATOM 1 O3' G A1005 49.748 97.165 99.771 1.00 38.57 O
ATOM 2 P U A1006 49.948 96.109 100.967 1.00 39.67 P
ATOM 3 OP1 U A1006 50.816 96.748 101.995 1.00 44.86 O
ATOM 4 OP2 U A1006 50.343 94.808 100.371 1.00 40.66 O
ATOM 5 O5' U A1006 48.500 95.933 101.587 1.00 39.08 O
ATOM 6 C5' U A1006 47.786 97.058 102.102 1.00 36.75 C
ATOM 7 C4' U A1006 46.376 96.656 102.439 1.00 38.12 C
ATOM 8 O4' U A1006 45.674 96.279 101.227 1.00 39.04 O
ATOM 9 C3' U A1006 46.221 95.432 103.330 1.00 38.96 C
ATOM 10 O3' U A1006 46.421 95.735 104.702 1.00 37.37 O
ATOM 11 C2' U A1006 44.788 95.025 103.039 1.00 38.99 C
ATOM 12 O2' U A1006 43.862 95.880 103.685 1.00 41.95 O
ATOM 13 C1' U A1006 44.724 95.264 101.525 1.00 38.58 C
ATOM 14 N1 U A1006 45.071 94.056 100.758 1.00 35.95 N
ATOM 15 C2 U A1006 44.086 93.101 100.585 1.00 35.41 C
ATOM 16 O2 U A1006 42.953 93.235 101.005 1.00 39.06 O
ATOM 17 N3 U A1006 44.477 91.981 99.898 1.00 33.62 N
ATOM 18 C4 U A1006 45.719 91.729 99.359 1.00 34.54 C
ATOM 19 O4 U A1006 45.915 90.669 98.770 1.00 32.65 O
ATOM 20 C5 U A1006 46.679 92.770 99.556 1.00 32.33 C
ATOM 21 C6 U A1006 46.333 93.868 100.234 1.00 34.83 C
ATOM 22 P G A1007 46.907 94.582 105.708 1.00 37.93 P
ATOM 23 OP1 G A1007 47.233 95.278 106.986 1.00 40.30 O
ATOM 24 OP2 G A1007 47.919 93.707 105.073 1.00 37.22 O
ATOM 25 O5' G A1007 45.602 93.704 105.934 1.00 37.35 O
TER

ATOM 1 O3' G B1004 52.317 95.779 94.232 1.00 34.03 O
ATOM 2 P G B1005 52.228 95.066 95.687 1.00 35.02 P
ATOM 3 OP1 G B1005 53.475 95.397 96.416 1.00 36.71 O
ATOM 4 OP2 G B1005 51.838 93.649 95.512 1.00 33.93 O
ATOM 5 O5' G B1005 51.005 95.758 96.430 1.00 34.02 O
ATOM 6 C5' G B1005 51.028 97.136 96.795 1.00 33.73 C
ATOM 7 C4' G B1005 49.686 97.543 97.358 1.00 34.78 C
ATOM 8 O4' G B1005 48.662 97.341 96.350 1.00 35.43 O
ATOM 9 C3' G B1005 49.175 96.737 98.543 1.00 34.50 C
ATOM 10 O3' G B1005 49.748 97.165 99.771 1.00 38.57 O
ATOM 11 C2' G B1005 47.686 97.024 98.486 1.00 35.82 C
ATOM 12 O2' G B1005 47.368 98.318 98.961 1.00 37.67 O
ATOM 13 C1' G B1005 47.437 96.977 96.977 1.00 34.42 C
ATOM 14 N9 G B1005 47.076 95.632 96.536 1.00 33.77 N
ATOM 15 C8 G B1005 47.873 94.744 95.850 1.00 33.98 C
ATOM 16 N7 G B1005 47.286 93.605 95.617 1.00 34.23 N
ATOM 17 C5 G B1005 46.021 93.749 96.174 1.00 32.37 C
ATOM 18 C6 G B1005 44.928 92.837 96.231 1.00 31.81 C
ATOM 19 O6 G B1005 44.851 91.703 95.766 1.00 32.77 O
ATOM 20 N1 G B1005 43.844 93.376 96.911 1.00 29.73 N
ATOM 21 C2 G B1005 43.805 94.630 97.459 1.00 32.08 C
ATOM 22 N2 G B1005 42.666 94.963 98.085 1.00 29.13 N
ATOM 23 N3 G B1005 44.811 95.499 97.400 1.00 33.67 N
ATOM 24 C4 G B1005 45.877 94.993 96.746 1.00 31.38 C
ATOM 25 P U B1006 49.948 96.109 100.967 1.00 39.67 P
ATOM 26 OP1 U B1006 50.816 96.748 101.995 1.00 44.86 O
ATOM 27 OP2 U B1006 50.343 94.808 100.371 1.00 40.66 O
ATOM 28 O5' U B1006 48.500 95.933 101.587 1.00 39.08 O
TER

Atoms:
C4: (45.719,91.729,99.359)
N3: (44.477,91.981,99.898)
OP1: (50.816,96.748,101.995)
OP2: (50.343,94.808,100.371)
C2: (44.086,93.101,100.585)
C1': (44.724,95.264,101.525)
C3': (46.221,95.432,103.330)
O5': (48.500,95.933,101.587)
O4': (45.674,96.279,101.227)
C5': (47.786,97.058,102.102)
P: (49.948,96.109,100.967)
C4': (46.376,96.656,102.439)
C2': (44.788,95.025,103.039)
O2': (43.862,95.880,103.685)
N1: (45.071,94.056,100.758)
O4: (45.915,90.669,98.770)
O2: (42.953,93.235,101.005)
C6: (46.333,93.868,100.234)
C5: (46.679,92.770,99.556)
O3': (46.421,95.735,104.702)
OP1: (53.475,95.397,96.416)
OP2: (51.838,93.649,95.512)
C3': (49.175,96.737,98.543)
C1': (47.437,96.977,96.977)
C5': (51.028,97.136,96.795)
O6: (44.851,91.703,95.766)
O4': (48.662,97.341,96.350)
C8: (47.873,94.744,95.850)
C2: (43.805,94.630,97.459)
C6: (44.928,92.837,96.231)
C5: (46.021,93.749,96.174)
C4: (45.877,94.993,96.746)
P: (52.228,95.066,95.687)
C4': (49.686,97.543,97.358)
C2': (47.686,97.024,98.486)
O2': (47.368,98.318,98.961)
N1: (43.844,93.376,96.911)
N2: (42.666,94.963,98.085)
N3: (44.811,95.499,97.400)
N7: (47.286,93.605,95.617)
N9: (47.076,95.632,96.536)
O5': (51.005,95.758,96.430)
O3': (49.748,97.165,99.771)
Image (generated by PyMOL):
PyMOL image
show in jmol