Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A347:A346
Extra
PDB:
ATOM 1 O3' A A 346 -22.394 37.125 113.351 1.00 12.00 O
ATOM 2 P G A 347 -23.447 38.290 113.677 1.00 28.59 P
ATOM 3 OP1 G A 347 -24.766 37.867 113.155 1.00 63.66 O
ATOM 4 OP2 G A 347 -22.846 39.547 113.190 1.00 62.33 O
ATOM 5 O5' G A 347 -23.523 38.336 115.276 1.00 15.06 O
ATOM 6 C5' G A 347 -24.434 37.477 116.020 1.00 15.06 C
ATOM 7 C4' G A 347 -24.411 37.818 117.501 1.00 15.25 C
ATOM 8 O4' G A 347 -23.053 37.688 117.994 1.00 15.42 O
ATOM 9 C3' G A 347 -24.838 39.228 117.893 1.00 16.12 C
ATOM 10 O3' G A 347 -26.249 39.306 118.085 1.00 17.19 O
ATOM 11 C2' G A 347 -24.108 39.438 119.212 1.00 16.72 C
ATOM 12 O2' G A 347 -24.802 38.822 120.284 1.00 16.15 O
ATOM 13 C1' G A 347 -22.796 38.688 118.969 1.00 16.29 C
ATOM 14 N9 G A 347 -21.722 39.545 118.467 1.00 42.45 N
ATOM 15 C8 G A 347 -21.189 39.523 117.206 1.00 42.02 C
ATOM 16 N7 G A 347 -20.259 40.417 117.026 1.00 43.45 N
ATOM 17 C5 G A 347 -20.170 41.069 118.241 1.00 43.89 C
ATOM 18 C6 G A 347 -19.350 42.133 118.631 1.00 43.73 C
ATOM 19 O6 G A 347 -18.519 42.744 117.959 1.00 44.99 O
ATOM 20 N1 G A 347 -19.570 42.487 119.951 1.00 43.06 N
ATOM 21 C2 G A 347 -20.476 41.895 120.782 1.00 42.70 C
ATOM 22 N2 G A 347 -20.551 42.392 122.016 1.00 41.75 N
ATOM 23 N3 G A 347 -21.258 40.897 120.427 1.00 43.75 N
ATOM 24 C4 G A 347 -21.055 40.536 119.149 1.00 43.35 C
ATOM 25 P U A 348 -26.983 40.741 118.062 1.00 32.71 P
ATOM 26 OP1 U A 348 -28.446 40.495 118.129 1.00 71.10 O
ATOM 27 OP2 U A 348 -26.418 41.511 116.919 1.00 72.98 O
ATOM 28 O5' U A 348 -26.527 41.463 119.414 1.00 21.41 O
TER
ATOM 1 O3' C B 345 -16.541 36.979 111.024 1.00 33.54 O
ATOM 2 P A B 346 -17.812 37.918 110.844 1.00 15.06 P
ATOM 3 OP1 A B 346 -18.501 37.506 109.605 1.00 92.58 O
ATOM 4 OP2 A B 346 -17.369 39.335 111.010 1.00 94.02 O
ATOM 5 O5' A B 346 -18.742 37.545 112.074 1.00 10.81 O
ATOM 6 C5' A B 346 -19.558 36.410 111.988 1.00 12.78 C
ATOM 7 C4' A B 346 -20.207 36.118 113.305 1.00 13.68 C
ATOM 8 O4' A B 346 -19.211 35.869 114.323 1.00 14.70 O
ATOM 9 C3' A B 346 -21.110 37.151 113.944 1.00 13.43 C
ATOM 10 O3' A B 346 -22.394 37.125 113.351 1.00 12.00 O
ATOM 11 C2' A B 346 -21.211 36.608 115.365 1.00 14.17 C
ATOM 12 O2' A B 346 -22.146 35.544 115.426 1.00 15.43 O
ATOM 13 C1' A B 346 -19.809 36.034 115.594 1.00 14.28 C
ATOM 14 N9 A B 346 -18.992 36.941 116.390 1.00 54.36 N
ATOM 15 C8 A B 346 -18.002 37.796 115.979 1.00 55.14 C
ATOM 16 N7 A B 346 -17.499 38.522 116.947 1.00 56.69 N
ATOM 17 C5 A B 346 -18.197 38.105 118.070 1.00 56.32 C
ATOM 18 C6 A B 346 -18.145 38.500 119.408 1.00 56.55 C
ATOM 19 N6 A B 346 -17.318 39.435 119.870 1.00 53.99 N
ATOM 20 N1 A B 346 -18.983 37.895 120.271 1.00 57.44 N
ATOM 21 C2 A B 346 -19.809 36.956 119.806 1.00 55.98 C
ATOM 22 N3 A B 346 -19.951 36.496 118.574 1.00 55.37 N
ATOM 23 C4 A B 346 -19.108 37.123 117.743 1.00 56.07 C
ATOM 24 P G B 347 -23.447 38.290 113.677 1.00 28.59 P
ATOM 25 OP1 G B 347 -24.766 37.867 113.155 1.00 63.66 O
ATOM 26 OP2 G B 347 -22.846 39.547 113.190 1.00 62.33 O
ATOM 27 O5' G B 347 -23.523 38.336 115.276 1.00 15.06 O
TER
ATOM 2 P G A 347 -23.447 38.290 113.677 1.00 28.59 P
ATOM 3 OP1 G A 347 -24.766 37.867 113.155 1.00 63.66 O
ATOM 4 OP2 G A 347 -22.846 39.547 113.190 1.00 62.33 O
ATOM 5 O5' G A 347 -23.523 38.336 115.276 1.00 15.06 O
ATOM 6 C5' G A 347 -24.434 37.477 116.020 1.00 15.06 C
ATOM 7 C4' G A 347 -24.411 37.818 117.501 1.00 15.25 C
ATOM 8 O4' G A 347 -23.053 37.688 117.994 1.00 15.42 O
ATOM 9 C3' G A 347 -24.838 39.228 117.893 1.00 16.12 C
ATOM 10 O3' G A 347 -26.249 39.306 118.085 1.00 17.19 O
ATOM 11 C2' G A 347 -24.108 39.438 119.212 1.00 16.72 C
ATOM 12 O2' G A 347 -24.802 38.822 120.284 1.00 16.15 O
ATOM 13 C1' G A 347 -22.796 38.688 118.969 1.00 16.29 C
ATOM 14 N9 G A 347 -21.722 39.545 118.467 1.00 42.45 N
ATOM 15 C8 G A 347 -21.189 39.523 117.206 1.00 42.02 C
ATOM 16 N7 G A 347 -20.259 40.417 117.026 1.00 43.45 N
ATOM 17 C5 G A 347 -20.170 41.069 118.241 1.00 43.89 C
ATOM 18 C6 G A 347 -19.350 42.133 118.631 1.00 43.73 C
ATOM 19 O6 G A 347 -18.519 42.744 117.959 1.00 44.99 O
ATOM 20 N1 G A 347 -19.570 42.487 119.951 1.00 43.06 N
ATOM 21 C2 G A 347 -20.476 41.895 120.782 1.00 42.70 C
ATOM 22 N2 G A 347 -20.551 42.392 122.016 1.00 41.75 N
ATOM 23 N3 G A 347 -21.258 40.897 120.427 1.00 43.75 N
ATOM 24 C4 G A 347 -21.055 40.536 119.149 1.00 43.35 C
ATOM 25 P U A 348 -26.983 40.741 118.062 1.00 32.71 P
ATOM 26 OP1 U A 348 -28.446 40.495 118.129 1.00 71.10 O
ATOM 27 OP2 U A 348 -26.418 41.511 116.919 1.00 72.98 O
ATOM 28 O5' U A 348 -26.527 41.463 119.414 1.00 21.41 O
TER
ATOM 1 O3' C B 345 -16.541 36.979 111.024 1.00 33.54 O
ATOM 2 P A B 346 -17.812 37.918 110.844 1.00 15.06 P
ATOM 3 OP1 A B 346 -18.501 37.506 109.605 1.00 92.58 O
ATOM 4 OP2 A B 346 -17.369 39.335 111.010 1.00 94.02 O
ATOM 5 O5' A B 346 -18.742 37.545 112.074 1.00 10.81 O
ATOM 6 C5' A B 346 -19.558 36.410 111.988 1.00 12.78 C
ATOM 7 C4' A B 346 -20.207 36.118 113.305 1.00 13.68 C
ATOM 8 O4' A B 346 -19.211 35.869 114.323 1.00 14.70 O
ATOM 9 C3' A B 346 -21.110 37.151 113.944 1.00 13.43 C
ATOM 10 O3' A B 346 -22.394 37.125 113.351 1.00 12.00 O
ATOM 11 C2' A B 346 -21.211 36.608 115.365 1.00 14.17 C
ATOM 12 O2' A B 346 -22.146 35.544 115.426 1.00 15.43 O
ATOM 13 C1' A B 346 -19.809 36.034 115.594 1.00 14.28 C
ATOM 14 N9 A B 346 -18.992 36.941 116.390 1.00 54.36 N
ATOM 15 C8 A B 346 -18.002 37.796 115.979 1.00 55.14 C
ATOM 16 N7 A B 346 -17.499 38.522 116.947 1.00 56.69 N
ATOM 17 C5 A B 346 -18.197 38.105 118.070 1.00 56.32 C
ATOM 18 C6 A B 346 -18.145 38.500 119.408 1.00 56.55 C
ATOM 19 N6 A B 346 -17.318 39.435 119.870 1.00 53.99 N
ATOM 20 N1 A B 346 -18.983 37.895 120.271 1.00 57.44 N
ATOM 21 C2 A B 346 -19.809 36.956 119.806 1.00 55.98 C
ATOM 22 N3 A B 346 -19.951 36.496 118.574 1.00 55.37 N
ATOM 23 C4 A B 346 -19.108 37.123 117.743 1.00 56.07 C
ATOM 24 P G B 347 -23.447 38.290 113.677 1.00 28.59 P
ATOM 25 OP1 G B 347 -24.766 37.867 113.155 1.00 63.66 O
ATOM 26 OP2 G B 347 -22.846 39.547 113.190 1.00 62.33 O
ATOM 27 O5' G B 347 -23.523 38.336 115.276 1.00 15.06 O
TER
Atoms:
OP1: (-24.766,37.867,113.155)
OP2: (-22.846,39.547,113.190)
C3': (-24.838,39.228,117.893)
C1': (-22.796,38.688,118.969)
C5': (-24.434,37.477,116.020)
O6: (-18.519,42.744,117.959)
O4': (-23.053,37.688,117.994)
C8: (-21.189,39.523,117.206)
C2: (-20.476,41.895,120.782)
C6: (-19.350,42.133,118.631)
C5: (-20.170,41.069,118.241)
C4: (-21.055,40.536,119.149)
P: (-23.447,38.290,113.677)
C4': (-24.411,37.818,117.501)
C2': (-24.108,39.438,119.212)
O2': (-24.802,38.822,120.284)
N1: (-19.570,42.487,119.951)
N2: (-20.551,42.392,122.016)
N3: (-21.258,40.897,120.427)
N7: (-20.259,40.417,117.026)
N9: (-21.722,39.545,118.467)
O5': (-23.523,38.336,115.276)
O3': (-26.249,39.306,118.085)
OP2: (-22.846,39.547,113.190)
C3': (-24.838,39.228,117.893)
C1': (-22.796,38.688,118.969)
C5': (-24.434,37.477,116.020)
O6: (-18.519,42.744,117.959)
O4': (-23.053,37.688,117.994)
C8: (-21.189,39.523,117.206)
C2: (-20.476,41.895,120.782)
C6: (-19.350,42.133,118.631)
C5: (-20.170,41.069,118.241)
C4: (-21.055,40.536,119.149)
P: (-23.447,38.290,113.677)
C4': (-24.411,37.818,117.501)
C2': (-24.108,39.438,119.212)
O2': (-24.802,38.822,120.284)
N1: (-19.570,42.487,119.951)
N2: (-20.551,42.392,122.016)
N3: (-21.258,40.897,120.427)
N7: (-20.259,40.417,117.026)
N9: (-21.722,39.545,118.467)
O5': (-23.523,38.336,115.276)
O3': (-26.249,39.306,118.085)
OP1: (-18.501,37.506,109.605)
OP2: (-17.369,39.335,111.010)
C3': (-21.110,37.151,113.944)
C1': (-19.809,36.034,115.594)
C5': (-19.558,36.410,111.988)
O4': (-19.211,35.869,114.323)
C8: (-18.002,37.796,115.979)
O2': (-22.146,35.544,115.426)
C6: (-18.145,38.500,119.408)
C5: (-18.197,38.105,118.070)
C4: (-19.108,37.123,117.743)
P: (-17.812,37.918,110.844)
C4': (-20.207,36.118,113.305)
C2': (-21.211,36.608,115.365)
C2: (-19.809,36.956,119.806)
N1: (-18.983,37.895,120.271)
N3: (-19.951,36.496,118.574)
N6: (-17.318,39.435,119.870)
N7: (-17.499,38.522,116.947)
N9: (-18.992,36.941,116.390)
O5': (-18.742,37.545,112.074)
O3': (-22.394,37.125,113.351)
OP2: (-17.369,39.335,111.010)
C3': (-21.110,37.151,113.944)
C1': (-19.809,36.034,115.594)
C5': (-19.558,36.410,111.988)
O4': (-19.211,35.869,114.323)
C8: (-18.002,37.796,115.979)
O2': (-22.146,35.544,115.426)
C6: (-18.145,38.500,119.408)
C5: (-18.197,38.105,118.070)
C4: (-19.108,37.123,117.743)
P: (-17.812,37.918,110.844)
C4': (-20.207,36.118,113.305)
C2': (-21.211,36.608,115.365)
C2: (-19.809,36.956,119.806)
N1: (-18.983,37.895,120.271)
N3: (-19.951,36.496,118.574)
N6: (-17.318,39.435,119.870)
N7: (-17.499,38.522,116.947)
N9: (-18.992,36.941,116.390)
O5': (-18.742,37.545,112.074)
O3': (-22.394,37.125,113.351)
Image (generated by PyMOL):