Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DDY:E18:E19
Extra
PDB:
ATOM 1 O3' C A 17 -29.759 -20.666 9.452 1.00 16.80 O
ATOM 2 P C A 18 -30.938 -19.755 10.052 1.00 17.03 P
ATOM 3 OP1 C A 18 -32.212 -20.099 9.368 1.00 15.43 O
ATOM 4 OP2 C A 18 -30.441 -18.359 9.999 1.00 17.23 O
ATOM 5 O5' C A 18 -31.024 -20.208 11.579 1.00 12.89 O
ATOM 6 C5' C A 18 -31.443 -21.520 11.923 1.00 10.96 C
ATOM 7 C4' C A 18 -31.091 -21.822 13.358 1.00 13.95 C
ATOM 8 O4' C A 18 -29.653 -21.842 13.509 1.00 15.72 O
ATOM 9 C3' C A 18 -31.564 -20.810 14.391 1.00 14.03 C
ATOM 10 O3' C A 18 -32.887 -21.080 14.814 1.00 17.56 O
ATOM 11 C2' C A 18 -30.616 -21.066 15.544 1.00 13.47 C
ATOM 12 O2' C A 18 -31.014 -22.224 16.237 1.00 13.70 O
ATOM 13 C1' C A 18 -29.311 -21.342 14.797 1.00 14.84 C
ATOM 14 N1 C A 18 -28.533 -20.118 14.608 1.00 13.87 N
ATOM 15 C2 C A 18 -27.600 -19.750 15.579 1.00 14.90 C
ATOM 16 O2 C A 18 -27.453 -20.473 16.580 1.00 13.08 O
ATOM 17 N3 C A 18 -26.886 -18.614 15.401 1.00 13.95 N
ATOM 18 C4 C A 18 -27.088 -17.865 14.314 1.00 13.96 C
ATOM 19 N4 C A 18 -26.384 -16.750 14.181 1.00 17.36 N
ATOM 20 C5 C A 18 -28.027 -18.227 13.313 1.00 14.88 C
ATOM 21 C6 C A 18 -28.721 -19.348 13.498 1.00 13.14 C
ATOM 22 P A A 19 -33.874 -19.865 15.158 1.00 23.27 P
ATOM 23 OP1 A A 19 -35.193 -20.458 15.523 1.00 19.49 O
ATOM 24 OP2 A A 19 -33.786 -18.888 14.032 1.00 19.74 O
ATOM 25 O5' A A 19 -33.218 -19.211 16.455 1.00 21.69 O
TER
ATOM 1 O3' C B 18 -32.887 -21.080 14.814 1.00 17.56 O
ATOM 2 P A B 19 -33.874 -19.865 15.158 1.00 23.27 P
ATOM 3 OP1 A B 19 -35.193 -20.458 15.523 1.00 19.49 O
ATOM 4 OP2 A B 19 -33.786 -18.888 14.032 1.00 19.74 O
ATOM 5 O5' A B 19 -33.218 -19.211 16.455 1.00 21.69 O
ATOM 6 C5' A B 19 -33.073 -19.965 17.656 1.00 24.03 C
ATOM 7 C4' A B 19 -32.266 -19.190 18.677 1.00 25.33 C
ATOM 8 O4' A B 19 -30.896 -19.034 18.226 1.00 25.65 O
ATOM 9 C3' A B 19 -32.730 -17.766 18.942 1.00 26.15 C
ATOM 10 O3' A B 19 -33.826 -17.717 19.842 1.00 26.82 O
ATOM 11 C2' A B 19 -31.477 -17.129 19.516 1.00 26.79 C
ATOM 12 O2' A B 19 -31.242 -17.487 20.864 1.00 31.41 O
ATOM 13 C1' A B 19 -30.405 -17.771 18.639 1.00 25.95 C
ATOM 14 N9 A B 19 -30.175 -16.966 17.446 1.00 27.10 N
ATOM 15 C8 A B 19 -30.691 -17.143 16.189 1.00 26.89 C
ATOM 16 N7 A B 19 -30.284 -16.249 15.322 1.00 26.75 N
ATOM 17 C5 A B 19 -29.445 -15.428 16.060 1.00 26.88 C
ATOM 18 C6 A B 19 -28.685 -14.297 15.717 1.00 29.02 C
ATOM 19 N6 A B 19 -28.645 -13.773 14.488 1.00 30.52 N
ATOM 20 N1 A B 19 -27.954 -13.715 16.691 1.00 29.30 N
ATOM 21 C2 A B 19 -27.992 -14.244 17.923 1.00 28.17 C
ATOM 22 N3 A B 19 -28.662 -15.299 18.366 1.00 27.33 N
ATOM 23 C4 A B 19 -29.375 -15.854 17.371 1.00 27.23 C
ATOM 24 P C B 20 -34.881 -16.521 19.730 1.00 25.56 P
ATOM 25 OP1 C B 20 -35.970 -16.863 20.676 1.00 23.63 O
ATOM 26 OP2 C B 20 -35.183 -16.305 18.291 1.00 24.59 O
ATOM 27 O5' C B 20 -34.080 -15.250 20.261 1.00 26.04 O
TER
ATOM 2 P C A 18 -30.938 -19.755 10.052 1.00 17.03 P
ATOM 3 OP1 C A 18 -32.212 -20.099 9.368 1.00 15.43 O
ATOM 4 OP2 C A 18 -30.441 -18.359 9.999 1.00 17.23 O
ATOM 5 O5' C A 18 -31.024 -20.208 11.579 1.00 12.89 O
ATOM 6 C5' C A 18 -31.443 -21.520 11.923 1.00 10.96 C
ATOM 7 C4' C A 18 -31.091 -21.822 13.358 1.00 13.95 C
ATOM 8 O4' C A 18 -29.653 -21.842 13.509 1.00 15.72 O
ATOM 9 C3' C A 18 -31.564 -20.810 14.391 1.00 14.03 C
ATOM 10 O3' C A 18 -32.887 -21.080 14.814 1.00 17.56 O
ATOM 11 C2' C A 18 -30.616 -21.066 15.544 1.00 13.47 C
ATOM 12 O2' C A 18 -31.014 -22.224 16.237 1.00 13.70 O
ATOM 13 C1' C A 18 -29.311 -21.342 14.797 1.00 14.84 C
ATOM 14 N1 C A 18 -28.533 -20.118 14.608 1.00 13.87 N
ATOM 15 C2 C A 18 -27.600 -19.750 15.579 1.00 14.90 C
ATOM 16 O2 C A 18 -27.453 -20.473 16.580 1.00 13.08 O
ATOM 17 N3 C A 18 -26.886 -18.614 15.401 1.00 13.95 N
ATOM 18 C4 C A 18 -27.088 -17.865 14.314 1.00 13.96 C
ATOM 19 N4 C A 18 -26.384 -16.750 14.181 1.00 17.36 N
ATOM 20 C5 C A 18 -28.027 -18.227 13.313 1.00 14.88 C
ATOM 21 C6 C A 18 -28.721 -19.348 13.498 1.00 13.14 C
ATOM 22 P A A 19 -33.874 -19.865 15.158 1.00 23.27 P
ATOM 23 OP1 A A 19 -35.193 -20.458 15.523 1.00 19.49 O
ATOM 24 OP2 A A 19 -33.786 -18.888 14.032 1.00 19.74 O
ATOM 25 O5' A A 19 -33.218 -19.211 16.455 1.00 21.69 O
TER
ATOM 1 O3' C B 18 -32.887 -21.080 14.814 1.00 17.56 O
ATOM 2 P A B 19 -33.874 -19.865 15.158 1.00 23.27 P
ATOM 3 OP1 A B 19 -35.193 -20.458 15.523 1.00 19.49 O
ATOM 4 OP2 A B 19 -33.786 -18.888 14.032 1.00 19.74 O
ATOM 5 O5' A B 19 -33.218 -19.211 16.455 1.00 21.69 O
ATOM 6 C5' A B 19 -33.073 -19.965 17.656 1.00 24.03 C
ATOM 7 C4' A B 19 -32.266 -19.190 18.677 1.00 25.33 C
ATOM 8 O4' A B 19 -30.896 -19.034 18.226 1.00 25.65 O
ATOM 9 C3' A B 19 -32.730 -17.766 18.942 1.00 26.15 C
ATOM 10 O3' A B 19 -33.826 -17.717 19.842 1.00 26.82 O
ATOM 11 C2' A B 19 -31.477 -17.129 19.516 1.00 26.79 C
ATOM 12 O2' A B 19 -31.242 -17.487 20.864 1.00 31.41 O
ATOM 13 C1' A B 19 -30.405 -17.771 18.639 1.00 25.95 C
ATOM 14 N9 A B 19 -30.175 -16.966 17.446 1.00 27.10 N
ATOM 15 C8 A B 19 -30.691 -17.143 16.189 1.00 26.89 C
ATOM 16 N7 A B 19 -30.284 -16.249 15.322 1.00 26.75 N
ATOM 17 C5 A B 19 -29.445 -15.428 16.060 1.00 26.88 C
ATOM 18 C6 A B 19 -28.685 -14.297 15.717 1.00 29.02 C
ATOM 19 N6 A B 19 -28.645 -13.773 14.488 1.00 30.52 N
ATOM 20 N1 A B 19 -27.954 -13.715 16.691 1.00 29.30 N
ATOM 21 C2 A B 19 -27.992 -14.244 17.923 1.00 28.17 C
ATOM 22 N3 A B 19 -28.662 -15.299 18.366 1.00 27.33 N
ATOM 23 C4 A B 19 -29.375 -15.854 17.371 1.00 27.23 C
ATOM 24 P C B 20 -34.881 -16.521 19.730 1.00 25.56 P
ATOM 25 OP1 C B 20 -35.970 -16.863 20.676 1.00 23.63 O
ATOM 26 OP2 C B 20 -35.183 -16.305 18.291 1.00 24.59 O
ATOM 27 O5' C B 20 -34.080 -15.250 20.261 1.00 26.04 O
TER
Atoms:
C2: (-27.600,-19.750,15.579)
OP1: (-32.212,-20.099,9.368)
OP2: (-30.441,-18.359,9.999)
C4: (-27.088,-17.865,14.314)
O5': (-31.024,-20.208,11.579)
C3': (-31.564,-20.810,14.391)
C1': (-29.311,-21.342,14.797)
O4': (-29.653,-21.842,13.509)
C5': (-31.443,-21.520,11.923)
P: (-30.938,-19.755,10.052)
O2: (-27.453,-20.473,16.580)
C4': (-31.091,-21.822,13.358)
C2': (-30.616,-21.066,15.544)
O2': (-31.014,-22.224,16.237)
N1: (-28.533,-20.118,14.608)
N3: (-26.886,-18.614,15.401)
N4: (-26.384,-16.750,14.181)
C6: (-28.721,-19.348,13.498)
C5: (-28.027,-18.227,13.313)
O3': (-32.887,-21.080,14.814)
OP1: (-32.212,-20.099,9.368)
OP2: (-30.441,-18.359,9.999)
C4: (-27.088,-17.865,14.314)
O5': (-31.024,-20.208,11.579)
C3': (-31.564,-20.810,14.391)
C1': (-29.311,-21.342,14.797)
O4': (-29.653,-21.842,13.509)
C5': (-31.443,-21.520,11.923)
P: (-30.938,-19.755,10.052)
O2: (-27.453,-20.473,16.580)
C4': (-31.091,-21.822,13.358)
C2': (-30.616,-21.066,15.544)
O2': (-31.014,-22.224,16.237)
N1: (-28.533,-20.118,14.608)
N3: (-26.886,-18.614,15.401)
N4: (-26.384,-16.750,14.181)
C6: (-28.721,-19.348,13.498)
C5: (-28.027,-18.227,13.313)
O3': (-32.887,-21.080,14.814)
OP1: (-35.193,-20.458,15.523)
OP2: (-33.786,-18.888,14.032)
C3': (-32.730,-17.766,18.942)
C1': (-30.405,-17.771,18.639)
C5': (-33.073,-19.965,17.656)
O4': (-30.896,-19.034,18.226)
C8: (-30.691,-17.143,16.189)
O2': (-31.242,-17.487,20.864)
C6: (-28.685,-14.297,15.717)
C5: (-29.445,-15.428,16.060)
C4: (-29.375,-15.854,17.371)
P: (-33.874,-19.865,15.158)
C4': (-32.266,-19.190,18.677)
C2': (-31.477,-17.129,19.516)
C2: (-27.992,-14.244,17.923)
N1: (-27.954,-13.715,16.691)
N3: (-28.662,-15.299,18.366)
N6: (-28.645,-13.773,14.488)
N7: (-30.284,-16.249,15.322)
N9: (-30.175,-16.966,17.446)
O5': (-33.218,-19.211,16.455)
O3': (-33.826,-17.717,19.842)
OP2: (-33.786,-18.888,14.032)
C3': (-32.730,-17.766,18.942)
C1': (-30.405,-17.771,18.639)
C5': (-33.073,-19.965,17.656)
O4': (-30.896,-19.034,18.226)
C8: (-30.691,-17.143,16.189)
O2': (-31.242,-17.487,20.864)
C6: (-28.685,-14.297,15.717)
C5: (-29.445,-15.428,16.060)
C4: (-29.375,-15.854,17.371)
P: (-33.874,-19.865,15.158)
C4': (-32.266,-19.190,18.677)
C2': (-31.477,-17.129,19.516)
C2: (-27.992,-14.244,17.923)
N1: (-27.954,-13.715,16.691)
N3: (-28.662,-15.299,18.366)
N6: (-28.645,-13.773,14.488)
N7: (-30.284,-16.249,15.322)
N9: (-30.175,-16.966,17.446)
O5': (-33.218,-19.211,16.455)
O3': (-33.826,-17.717,19.842)
Image (generated by PyMOL):