Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21228:21226
Extra
PDB:
ATOM 1 O3' G A1227 -58.402 -45.605 7.002 1.00107.04 O
ATOM 2 P C A1228 -58.993 -45.193 8.424 1.00 87.36 P
ATOM 3 OP1 C A1228 -59.007 -46.418 9.261 1.00 87.06 O
ATOM 4 OP2 C A1228 -60.283 -44.499 8.161 1.00 87.73 O
ATOM 5 O5' C A1228 -57.902 -44.152 8.980 1.00 86.90 O
ATOM 6 C5' C A1228 -57.960 -43.662 10.322 1.00 86.37 C
ATOM 7 C4' C A1228 -56.611 -43.201 10.810 1.00 85.92 C
ATOM 8 O4' C A1228 -55.913 -44.300 11.448 1.00 85.58 O
ATOM 9 C3' C A1228 -55.649 -42.726 9.734 1.00 86.17 C
ATOM 10 O3' C A1228 -55.891 -41.390 9.327 1.00 86.36 O
ATOM 11 C2' C A1228 -54.271 -42.944 10.369 1.00 85.69 C
ATOM 12 O2' C A1228 -53.943 -41.881 11.236 1.00 85.28 O
ATOM 13 C1' C A1228 -54.513 -44.182 11.221 1.00 85.43 C
ATOM 14 N1 C A1228 -53.997 -45.428 10.592 1.00 85.63 N
ATOM 15 C2 C A1228 -54.818 -46.212 9.773 1.00 86.10 C
ATOM 16 O2 C A1228 -55.959 -45.871 9.530 1.00 86.37 O
ATOM 17 N3 C A1228 -54.391 -47.353 9.223 1.00 86.30 N
ATOM 18 C4 C A1228 -53.163 -47.756 9.459 1.00 86.05 C
ATOM 19 N4 C A1228 -52.848 -48.911 8.856 1.00 86.29 N
ATOM 20 C5 C A1228 -52.266 -46.997 10.296 1.00 85.57 C
ATOM 21 C6 C A1228 -52.719 -45.850 10.842 1.00 85.37 C
ATOM 22 P U A1229 -55.810 -40.994 7.771 1.00106.56 P
ATOM 23 OP1 U A1229 -56.220 -39.568 7.665 1.00106.70 O
ATOM 24 OP2 U A1229 -56.575 -42.022 7.015 1.00107.02 O
ATOM 25 O5' U A1229 -54.263 -41.134 7.448 1.00106.44 O
TER
ATOM 1 O3' G B1225 -60.383 -55.866 10.867 1.00124.51 O
ATOM 2 P A B1226 -60.365 -54.630 11.900 1.00 90.99 P
ATOM 3 OP1 A B1226 -59.811 -55.132 13.190 1.00 90.51 O
ATOM 4 OP2 A B1226 -61.720 -54.044 11.886 1.00 91.22 O
ATOM 5 O5' A B1226 -59.342 -53.623 11.233 1.00 90.93 O
ATOM 6 C5' A B1226 -58.721 -52.605 11.996 1.00 90.47 C
ATOM 7 C4' A B1226 -58.930 -51.263 11.363 1.00 90.63 C
ATOM 8 O4' A B1226 -58.736 -50.221 12.346 1.00 90.18 O
ATOM 9 C3' A B1226 -57.955 -50.859 10.277 1.00 90.81 C
ATOM 10 O3' A B1226 -58.043 -51.621 9.050 1.00 91.32 O
ATOM 11 C2' A B1226 -58.211 -49.358 10.190 1.00 90.80 C
ATOM 12 O2' A B1226 -59.446 -49.087 9.555 1.00 91.26 O
ATOM 13 C1' A B1226 -58.383 -49.027 11.679 1.00 90.27 C
ATOM 14 N9 A B1226 -57.156 -48.473 12.279 1.00 89.81 N
ATOM 15 C8 A B1226 -57.127 -47.290 12.991 1.00 89.48 C
ATOM 16 N7 A B1226 -55.943 -46.937 13.417 1.00 89.11 N
ATOM 17 C5 A B1226 -55.119 -47.958 12.946 1.00 89.20 C
ATOM 18 C6 A B1226 -53.718 -48.152 13.086 1.00 88.96 C
ATOM 19 N6 A B1226 -52.914 -47.302 13.755 1.00 88.56 N
ATOM 20 N1 A B1226 -53.189 -49.263 12.507 1.00 89.16 N
ATOM 21 C2 A B1226 -54.027 -50.093 11.844 1.00 89.57 C
ATOM 22 N3 A B1226 -55.349 -50.025 11.646 1.00 89.83 N
ATOM 23 C4 A B1226 -55.847 -48.914 12.228 1.00 89.63 C
ATOM 24 P G B1227 -58.921 -51.163 7.776 1.00107.02 P
ATOM 25 OP1 G B1227 -60.275 -50.796 8.283 1.00107.08 O
ATOM 26 OP2 G B1227 -58.805 -52.242 6.766 1.00107.45 O
ATOM 27 O5' G B1227 -58.177 -49.874 7.242 1.00107.03 O
TER
ATOM 2 P C A1228 -58.993 -45.193 8.424 1.00 87.36 P
ATOM 3 OP1 C A1228 -59.007 -46.418 9.261 1.00 87.06 O
ATOM 4 OP2 C A1228 -60.283 -44.499 8.161 1.00 87.73 O
ATOM 5 O5' C A1228 -57.902 -44.152 8.980 1.00 86.90 O
ATOM 6 C5' C A1228 -57.960 -43.662 10.322 1.00 86.37 C
ATOM 7 C4' C A1228 -56.611 -43.201 10.810 1.00 85.92 C
ATOM 8 O4' C A1228 -55.913 -44.300 11.448 1.00 85.58 O
ATOM 9 C3' C A1228 -55.649 -42.726 9.734 1.00 86.17 C
ATOM 10 O3' C A1228 -55.891 -41.390 9.327 1.00 86.36 O
ATOM 11 C2' C A1228 -54.271 -42.944 10.369 1.00 85.69 C
ATOM 12 O2' C A1228 -53.943 -41.881 11.236 1.00 85.28 O
ATOM 13 C1' C A1228 -54.513 -44.182 11.221 1.00 85.43 C
ATOM 14 N1 C A1228 -53.997 -45.428 10.592 1.00 85.63 N
ATOM 15 C2 C A1228 -54.818 -46.212 9.773 1.00 86.10 C
ATOM 16 O2 C A1228 -55.959 -45.871 9.530 1.00 86.37 O
ATOM 17 N3 C A1228 -54.391 -47.353 9.223 1.00 86.30 N
ATOM 18 C4 C A1228 -53.163 -47.756 9.459 1.00 86.05 C
ATOM 19 N4 C A1228 -52.848 -48.911 8.856 1.00 86.29 N
ATOM 20 C5 C A1228 -52.266 -46.997 10.296 1.00 85.57 C
ATOM 21 C6 C A1228 -52.719 -45.850 10.842 1.00 85.37 C
ATOM 22 P U A1229 -55.810 -40.994 7.771 1.00106.56 P
ATOM 23 OP1 U A1229 -56.220 -39.568 7.665 1.00106.70 O
ATOM 24 OP2 U A1229 -56.575 -42.022 7.015 1.00107.02 O
ATOM 25 O5' U A1229 -54.263 -41.134 7.448 1.00106.44 O
TER
ATOM 1 O3' G B1225 -60.383 -55.866 10.867 1.00124.51 O
ATOM 2 P A B1226 -60.365 -54.630 11.900 1.00 90.99 P
ATOM 3 OP1 A B1226 -59.811 -55.132 13.190 1.00 90.51 O
ATOM 4 OP2 A B1226 -61.720 -54.044 11.886 1.00 91.22 O
ATOM 5 O5' A B1226 -59.342 -53.623 11.233 1.00 90.93 O
ATOM 6 C5' A B1226 -58.721 -52.605 11.996 1.00 90.47 C
ATOM 7 C4' A B1226 -58.930 -51.263 11.363 1.00 90.63 C
ATOM 8 O4' A B1226 -58.736 -50.221 12.346 1.00 90.18 O
ATOM 9 C3' A B1226 -57.955 -50.859 10.277 1.00 90.81 C
ATOM 10 O3' A B1226 -58.043 -51.621 9.050 1.00 91.32 O
ATOM 11 C2' A B1226 -58.211 -49.358 10.190 1.00 90.80 C
ATOM 12 O2' A B1226 -59.446 -49.087 9.555 1.00 91.26 O
ATOM 13 C1' A B1226 -58.383 -49.027 11.679 1.00 90.27 C
ATOM 14 N9 A B1226 -57.156 -48.473 12.279 1.00 89.81 N
ATOM 15 C8 A B1226 -57.127 -47.290 12.991 1.00 89.48 C
ATOM 16 N7 A B1226 -55.943 -46.937 13.417 1.00 89.11 N
ATOM 17 C5 A B1226 -55.119 -47.958 12.946 1.00 89.20 C
ATOM 18 C6 A B1226 -53.718 -48.152 13.086 1.00 88.96 C
ATOM 19 N6 A B1226 -52.914 -47.302 13.755 1.00 88.56 N
ATOM 20 N1 A B1226 -53.189 -49.263 12.507 1.00 89.16 N
ATOM 21 C2 A B1226 -54.027 -50.093 11.844 1.00 89.57 C
ATOM 22 N3 A B1226 -55.349 -50.025 11.646 1.00 89.83 N
ATOM 23 C4 A B1226 -55.847 -48.914 12.228 1.00 89.63 C
ATOM 24 P G B1227 -58.921 -51.163 7.776 1.00107.02 P
ATOM 25 OP1 G B1227 -60.275 -50.796 8.283 1.00107.08 O
ATOM 26 OP2 G B1227 -58.805 -52.242 6.766 1.00107.45 O
ATOM 27 O5' G B1227 -58.177 -49.874 7.242 1.00107.03 O
TER
Atoms:
C2: (-54.818,-46.212,9.773)
OP1: (-59.007,-46.418,9.261)
OP2: (-60.283,-44.499,8.161)
C4: (-53.163,-47.756,9.459)
O5': (-57.902,-44.152,8.980)
C3': (-55.649,-42.726,9.734)
C1': (-54.513,-44.182,11.221)
O4': (-55.913,-44.300,11.448)
C5': (-57.960,-43.662,10.322)
P: (-58.993,-45.193,8.424)
O2: (-55.959,-45.871,9.530)
C4': (-56.611,-43.201,10.810)
C2': (-54.271,-42.944,10.369)
O2': (-53.943,-41.881,11.236)
N1: (-53.997,-45.428,10.592)
N3: (-54.391,-47.353,9.223)
N4: (-52.848,-48.911,8.856)
C6: (-52.719,-45.850,10.842)
C5: (-52.266,-46.997,10.296)
O3': (-55.891,-41.390,9.327)
OP1: (-59.007,-46.418,9.261)
OP2: (-60.283,-44.499,8.161)
C4: (-53.163,-47.756,9.459)
O5': (-57.902,-44.152,8.980)
C3': (-55.649,-42.726,9.734)
C1': (-54.513,-44.182,11.221)
O4': (-55.913,-44.300,11.448)
C5': (-57.960,-43.662,10.322)
P: (-58.993,-45.193,8.424)
O2: (-55.959,-45.871,9.530)
C4': (-56.611,-43.201,10.810)
C2': (-54.271,-42.944,10.369)
O2': (-53.943,-41.881,11.236)
N1: (-53.997,-45.428,10.592)
N3: (-54.391,-47.353,9.223)
N4: (-52.848,-48.911,8.856)
C6: (-52.719,-45.850,10.842)
C5: (-52.266,-46.997,10.296)
O3': (-55.891,-41.390,9.327)
OP1: (-59.811,-55.132,13.190)
OP2: (-61.720,-54.044,11.886)
C3': (-57.955,-50.859,10.277)
C1': (-58.383,-49.027,11.679)
C5': (-58.721,-52.605,11.996)
O4': (-58.736,-50.221,12.346)
C8: (-57.127,-47.290,12.991)
O2': (-59.446,-49.087,9.555)
C6: (-53.718,-48.152,13.086)
C5: (-55.119,-47.958,12.946)
C4: (-55.847,-48.914,12.228)
P: (-60.365,-54.630,11.900)
C4': (-58.930,-51.263,11.363)
C2': (-58.211,-49.358,10.190)
C2: (-54.027,-50.093,11.844)
N1: (-53.189,-49.263,12.507)
N3: (-55.349,-50.025,11.646)
N6: (-52.914,-47.302,13.755)
N7: (-55.943,-46.937,13.417)
N9: (-57.156,-48.473,12.279)
O5': (-59.342,-53.623,11.233)
O3': (-58.043,-51.621,9.050)
OP2: (-61.720,-54.044,11.886)
C3': (-57.955,-50.859,10.277)
C1': (-58.383,-49.027,11.679)
C5': (-58.721,-52.605,11.996)
O4': (-58.736,-50.221,12.346)
C8: (-57.127,-47.290,12.991)
O2': (-59.446,-49.087,9.555)
C6: (-53.718,-48.152,13.086)
C5: (-55.119,-47.958,12.946)
C4: (-55.847,-48.914,12.228)
P: (-60.365,-54.630,11.900)
C4': (-58.930,-51.263,11.363)
C2': (-58.211,-49.358,10.190)
C2: (-54.027,-50.093,11.844)
N1: (-53.189,-49.263,12.507)
N3: (-55.349,-50.025,11.646)
N6: (-52.914,-47.302,13.755)
N7: (-55.943,-46.937,13.417)
N9: (-57.156,-48.473,12.279)
O5': (-59.342,-53.623,11.233)
O3': (-58.043,-51.621,9.050)
Image (generated by PyMOL):