Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OUY:D4:D3
Extra
PDB:
ATOM 1 O3' A A 3 25.678 -2.029 13.726 1.00 99.72 O
ATOM 2 P G A 4 25.322 -1.271 12.357 1.00101.73 P
ATOM 3 OP1 G A 4 26.493 -0.462 11.961 1.00104.55 O
ATOM 4 OP2 G A 4 24.018 -0.591 12.545 1.00 95.95 O
ATOM 5 O5' G A 4 25.092 -2.468 11.305 1.00106.84 O
ATOM 6 C5' G A 4 26.157 -3.301 10.820 1.00113.78 C
ATOM 7 C4' G A 4 25.647 -4.464 9.974 1.00118.02 C
ATOM 8 O4' G A 4 24.670 -5.239 10.719 1.00113.91 O
ATOM 9 C3' G A 4 24.914 -4.100 8.687 1.00120.14 C
ATOM 10 O3' G A 4 25.810 -3.863 7.603 1.00128.07 O
ATOM 11 C2' G A 4 24.068 -5.346 8.446 1.00121.24 C
ATOM 12 O2' G A 4 24.795 -6.434 7.916 1.00128.71 O
ATOM 13 C1' G A 4 23.623 -5.662 9.861 1.00114.66 C
ATOM 14 N9 G A 4 22.363 -4.988 10.183 1.00108.59 N
ATOM 15 C8 G A 4 22.159 -3.921 11.029 1.00102.61 C
ATOM 16 N7 G A 4 20.912 -3.542 11.105 1.00 98.89 N
ATOM 17 C5 G A 4 20.242 -4.410 10.251 1.00102.51 C
ATOM 18 C6 G A 4 18.862 -4.489 9.919 1.00101.74 C
ATOM 19 O6 G A 4 17.937 -3.774 10.336 1.00 97.26 O
ATOM 20 N1 G A 4 18.603 -5.522 9.007 1.00107.46 N
ATOM 21 C2 G A 4 19.559 -6.369 8.482 1.00113.01 C
ATOM 22 N2 G A 4 19.138 -7.302 7.624 1.00118.58 N
ATOM 23 N3 G A 4 20.851 -6.305 8.784 1.00113.81 N
ATOM 24 C4 G A 4 21.122 -5.306 9.672 1.00108.62 C
ATOM 25 P U A 5 25.340 -3.041 6.303 1.00130.73 P
ATOM 26 OP1 U A 5 26.512 -2.957 5.399 1.00137.83 O
ATOM 27 OP2 U A 5 24.686 -1.790 6.759 1.00122.86 O
ATOM 28 O5' U A 5 24.234 -3.984 5.617 1.00132.91 O
TER
ATOM 1 O3' A B 2 22.200 -0.110 18.398 1.00 70.53 O
ATOM 2 P A B 3 22.266 0.259 16.851 1.00 72.38 P
ATOM 3 OP1 A B 3 23.098 1.473 16.767 1.00 73.14 O
ATOM 4 OP2 A B 3 20.897 0.250 16.293 1.00 70.06 O
ATOM 5 O5' A B 3 23.046 -0.983 16.211 1.00 78.58 O
ATOM 6 C5' A B 3 24.366 -1.357 16.632 1.00 84.65 C
ATOM 7 C4' A B 3 24.797 -2.644 15.949 1.00 91.20 C
ATOM 8 O4' A B 3 23.976 -3.756 16.402 1.00 90.26 O
ATOM 9 C3' A B 3 24.607 -2.642 14.436 1.00 95.16 C
ATOM 10 O3' A B 3 25.678 -2.029 13.726 1.00 99.72 O
ATOM 11 C2' A B 3 24.507 -4.125 14.129 1.00 98.64 C
ATOM 12 O2' A B 3 25.776 -4.741 14.128 1.00104.43 O
ATOM 13 C1' A B 3 23.645 -4.587 15.296 1.00 94.68 C
ATOM 14 N9 A B 3 22.226 -4.465 14.957 1.00 92.24 N
ATOM 15 C8 A B 3 21.361 -3.487 15.363 1.00 88.09 C
ATOM 16 N7 A B 3 20.142 -3.612 14.898 1.00 87.21 N
ATOM 17 C5 A B 3 20.204 -4.751 14.125 1.00 91.13 C
ATOM 18 C6 A B 3 19.227 -5.421 13.363 1.00 93.21 C
ATOM 19 N6 A B 3 17.965 -4.992 13.274 1.00 90.99 N
ATOM 20 N1 A B 3 19.599 -6.543 12.700 1.00 98.43 N
ATOM 21 C2 A B 3 20.875 -6.955 12.804 1.00101.26 C
ATOM 22 N3 A B 3 21.881 -6.405 13.497 1.00 99.85 N
ATOM 23 C4 A B 3 21.480 -5.292 14.143 1.00 94.57 C
ATOM 24 P G B 4 25.322 -1.271 12.357 1.00101.73 P
ATOM 25 OP1 G B 4 26.493 -0.462 11.961 1.00104.55 O
ATOM 26 OP2 G B 4 24.018 -0.591 12.545 1.00 95.95 O
ATOM 27 O5' G B 4 25.092 -2.468 11.305 1.00106.84 O
TER
ATOM 2 P G A 4 25.322 -1.271 12.357 1.00101.73 P
ATOM 3 OP1 G A 4 26.493 -0.462 11.961 1.00104.55 O
ATOM 4 OP2 G A 4 24.018 -0.591 12.545 1.00 95.95 O
ATOM 5 O5' G A 4 25.092 -2.468 11.305 1.00106.84 O
ATOM 6 C5' G A 4 26.157 -3.301 10.820 1.00113.78 C
ATOM 7 C4' G A 4 25.647 -4.464 9.974 1.00118.02 C
ATOM 8 O4' G A 4 24.670 -5.239 10.719 1.00113.91 O
ATOM 9 C3' G A 4 24.914 -4.100 8.687 1.00120.14 C
ATOM 10 O3' G A 4 25.810 -3.863 7.603 1.00128.07 O
ATOM 11 C2' G A 4 24.068 -5.346 8.446 1.00121.24 C
ATOM 12 O2' G A 4 24.795 -6.434 7.916 1.00128.71 O
ATOM 13 C1' G A 4 23.623 -5.662 9.861 1.00114.66 C
ATOM 14 N9 G A 4 22.363 -4.988 10.183 1.00108.59 N
ATOM 15 C8 G A 4 22.159 -3.921 11.029 1.00102.61 C
ATOM 16 N7 G A 4 20.912 -3.542 11.105 1.00 98.89 N
ATOM 17 C5 G A 4 20.242 -4.410 10.251 1.00102.51 C
ATOM 18 C6 G A 4 18.862 -4.489 9.919 1.00101.74 C
ATOM 19 O6 G A 4 17.937 -3.774 10.336 1.00 97.26 O
ATOM 20 N1 G A 4 18.603 -5.522 9.007 1.00107.46 N
ATOM 21 C2 G A 4 19.559 -6.369 8.482 1.00113.01 C
ATOM 22 N2 G A 4 19.138 -7.302 7.624 1.00118.58 N
ATOM 23 N3 G A 4 20.851 -6.305 8.784 1.00113.81 N
ATOM 24 C4 G A 4 21.122 -5.306 9.672 1.00108.62 C
ATOM 25 P U A 5 25.340 -3.041 6.303 1.00130.73 P
ATOM 26 OP1 U A 5 26.512 -2.957 5.399 1.00137.83 O
ATOM 27 OP2 U A 5 24.686 -1.790 6.759 1.00122.86 O
ATOM 28 O5' U A 5 24.234 -3.984 5.617 1.00132.91 O
TER
ATOM 1 O3' A B 2 22.200 -0.110 18.398 1.00 70.53 O
ATOM 2 P A B 3 22.266 0.259 16.851 1.00 72.38 P
ATOM 3 OP1 A B 3 23.098 1.473 16.767 1.00 73.14 O
ATOM 4 OP2 A B 3 20.897 0.250 16.293 1.00 70.06 O
ATOM 5 O5' A B 3 23.046 -0.983 16.211 1.00 78.58 O
ATOM 6 C5' A B 3 24.366 -1.357 16.632 1.00 84.65 C
ATOM 7 C4' A B 3 24.797 -2.644 15.949 1.00 91.20 C
ATOM 8 O4' A B 3 23.976 -3.756 16.402 1.00 90.26 O
ATOM 9 C3' A B 3 24.607 -2.642 14.436 1.00 95.16 C
ATOM 10 O3' A B 3 25.678 -2.029 13.726 1.00 99.72 O
ATOM 11 C2' A B 3 24.507 -4.125 14.129 1.00 98.64 C
ATOM 12 O2' A B 3 25.776 -4.741 14.128 1.00104.43 O
ATOM 13 C1' A B 3 23.645 -4.587 15.296 1.00 94.68 C
ATOM 14 N9 A B 3 22.226 -4.465 14.957 1.00 92.24 N
ATOM 15 C8 A B 3 21.361 -3.487 15.363 1.00 88.09 C
ATOM 16 N7 A B 3 20.142 -3.612 14.898 1.00 87.21 N
ATOM 17 C5 A B 3 20.204 -4.751 14.125 1.00 91.13 C
ATOM 18 C6 A B 3 19.227 -5.421 13.363 1.00 93.21 C
ATOM 19 N6 A B 3 17.965 -4.992 13.274 1.00 90.99 N
ATOM 20 N1 A B 3 19.599 -6.543 12.700 1.00 98.43 N
ATOM 21 C2 A B 3 20.875 -6.955 12.804 1.00101.26 C
ATOM 22 N3 A B 3 21.881 -6.405 13.497 1.00 99.85 N
ATOM 23 C4 A B 3 21.480 -5.292 14.143 1.00 94.57 C
ATOM 24 P G B 4 25.322 -1.271 12.357 1.00101.73 P
ATOM 25 OP1 G B 4 26.493 -0.462 11.961 1.00104.55 O
ATOM 26 OP2 G B 4 24.018 -0.591 12.545 1.00 95.95 O
ATOM 27 O5' G B 4 25.092 -2.468 11.305 1.00106.84 O
TER
Atoms:
OP1: (26.493,-0.462,11.961)
OP2: (24.018,-0.591,12.545)
C3': (24.914,-4.100,8.687)
C1': (23.623,-5.662,9.861)
C5': (26.157,-3.301,10.820)
O6: (17.937,-3.774,10.336)
O4': (24.670,-5.239,10.719)
C8: (22.159,-3.921,11.029)
C2: (19.559,-6.369,8.482)
C6: (18.862,-4.489,9.919)
C5: (20.242,-4.410,10.251)
C4: (21.122,-5.306,9.672)
P: (25.322,-1.271,12.357)
C4': (25.647,-4.464,9.974)
C2': (24.068,-5.346,8.446)
O2': (24.795,-6.434,7.916)
N1: (18.603,-5.522,9.007)
N2: (19.138,-7.302,7.624)
N3: (20.851,-6.305,8.784)
N7: (20.912,-3.542,11.105)
N9: (22.363,-4.988,10.183)
O5': (25.092,-2.468,11.305)
O3': (25.810,-3.863,7.603)
OP2: (24.018,-0.591,12.545)
C3': (24.914,-4.100,8.687)
C1': (23.623,-5.662,9.861)
C5': (26.157,-3.301,10.820)
O6: (17.937,-3.774,10.336)
O4': (24.670,-5.239,10.719)
C8: (22.159,-3.921,11.029)
C2: (19.559,-6.369,8.482)
C6: (18.862,-4.489,9.919)
C5: (20.242,-4.410,10.251)
C4: (21.122,-5.306,9.672)
P: (25.322,-1.271,12.357)
C4': (25.647,-4.464,9.974)
C2': (24.068,-5.346,8.446)
O2': (24.795,-6.434,7.916)
N1: (18.603,-5.522,9.007)
N2: (19.138,-7.302,7.624)
N3: (20.851,-6.305,8.784)
N7: (20.912,-3.542,11.105)
N9: (22.363,-4.988,10.183)
O5': (25.092,-2.468,11.305)
O3': (25.810,-3.863,7.603)
OP1: (23.098,1.473,16.767)
OP2: (20.897,0.250,16.293)
C3': (24.607,-2.642,14.436)
C1': (23.645,-4.587,15.296)
C5': (24.366,-1.357,16.632)
O4': (23.976,-3.756,16.402)
C8: (21.361,-3.487,15.363)
O2': (25.776,-4.741,14.128)
C6: (19.227,-5.421,13.363)
C5: (20.204,-4.751,14.125)
C4: (21.480,-5.292,14.143)
P: (22.266,0.259,16.851)
C4': (24.797,-2.644,15.949)
C2': (24.507,-4.125,14.129)
C2: (20.875,-6.955,12.804)
N1: (19.599,-6.543,12.700)
N3: (21.881,-6.405,13.497)
N6: (17.965,-4.992,13.274)
N7: (20.142,-3.612,14.898)
N9: (22.226,-4.465,14.957)
O5': (23.046,-0.983,16.211)
O3': (25.678,-2.029,13.726)
OP2: (20.897,0.250,16.293)
C3': (24.607,-2.642,14.436)
C1': (23.645,-4.587,15.296)
C5': (24.366,-1.357,16.632)
O4': (23.976,-3.756,16.402)
C8: (21.361,-3.487,15.363)
O2': (25.776,-4.741,14.128)
C6: (19.227,-5.421,13.363)
C5: (20.204,-4.751,14.125)
C4: (21.480,-5.292,14.143)
P: (22.266,0.259,16.851)
C4': (24.797,-2.644,15.949)
C2': (24.507,-4.125,14.129)
C2: (20.875,-6.955,12.804)
N1: (19.599,-6.543,12.700)
N3: (21.881,-6.405,13.497)
N6: (17.965,-4.992,13.274)
N7: (20.142,-3.612,14.898)
N9: (22.226,-4.465,14.957)
O5': (23.046,-0.983,16.211)
O3': (25.678,-2.029,13.726)
Image (generated by PyMOL):