Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y39:D17:D16
Extra
PDB:
ATOM 1 O3' A A 16 129.756 49.465 11.913 1.00 57.60 O
ATOM 2 P G A 17 129.304 50.955 12.300 1.00 56.70 P
ATOM 3 OP1 G A 17 130.406 51.548 13.115 1.00 56.03 O
ATOM 4 OP2 G A 17 127.910 50.936 12.840 1.00 54.26 O
ATOM 5 O5' G A 17 129.298 51.678 10.885 1.00 56.70 O
ATOM 6 C5' G A 17 130.499 51.760 10.126 1.00 55.43 C
ATOM 7 C4' G A 17 130.210 52.292 8.752 1.00 55.31 C
ATOM 8 O4' G A 17 129.471 51.305 7.994 1.00 56.10 O
ATOM 9 C3' G A 17 129.344 53.536 8.703 1.00 54.70 C
ATOM 10 O3' G A 17 130.159 54.692 8.927 1.00 54.11 O
ATOM 11 C2' G A 17 128.774 53.464 7.284 1.00 54.85 C
ATOM 12 O2' G A 17 129.658 53.924 6.277 1.00 54.07 O
ATOM 13 C1' G A 17 128.579 51.956 7.110 1.00 55.33 C
ATOM 14 N9 G A 17 127.236 51.509 7.437 1.00 55.61 N
ATOM 15 C8 G A 17 126.745 51.223 8.685 1.00 55.62 C
ATOM 16 N7 G A 17 125.495 50.852 8.668 1.00 56.32 N
ATOM 17 C5 G A 17 125.144 50.893 7.328 1.00 57.12 C
ATOM 18 C6 G A 17 123.918 50.592 6.697 1.00 58.69 C
ATOM 19 O6 G A 17 122.869 50.200 7.213 1.00 63.05 O
ATOM 20 N1 G A 17 123.988 50.776 5.318 1.00 57.70 N
ATOM 21 C2 G A 17 125.106 51.177 4.637 1.00 57.12 C
ATOM 22 N2 G A 17 124.974 51.294 3.306 1.00 58.19 N
ATOM 23 N3 G A 17 126.269 51.446 5.217 1.00 56.83 N
ATOM 24 C4 G A 17 126.211 51.291 6.555 1.00 56.49 C
ATOM 25 P A A 18 129.768 55.744 10.081 1.00 52.26 P
ATOM 26 OP1 A A 18 130.810 56.798 10.068 1.00 50.48 O
ATOM 27 OP2 A A 18 129.514 54.979 11.338 1.00 51.45 O
ATOM 28 O5' A A 18 128.405 56.378 9.554 1.00 50.68 O
TER
ATOM 1 O3' U B 15 124.281 48.386 13.123 1.00 72.16 O
ATOM 2 P A B 16 125.449 47.429 13.678 1.00 71.13 P
ATOM 3 OP1 A B 16 124.954 46.031 13.629 1.00 72.62 O
ATOM 4 OP2 A B 16 125.945 47.981 14.963 1.00 71.38 O
ATOM 5 O5' A B 16 126.619 47.561 12.605 1.00 67.89 O
ATOM 6 C5' A B 16 127.931 47.108 12.922 1.00 64.19 C
ATOM 7 C4' A B 16 128.843 47.264 11.732 1.00 61.54 C
ATOM 8 O4' A B 16 128.361 46.451 10.636 1.00 61.46 O
ATOM 9 C3' A B 16 128.887 48.654 11.146 1.00 60.54 C
ATOM 10 O3' A B 16 129.756 49.465 11.913 1.00 57.60 O
ATOM 11 C2' A B 16 129.382 48.390 9.729 1.00 61.30 C
ATOM 12 O2' A B 16 130.776 48.188 9.638 1.00 62.31 O
ATOM 13 C1' A B 16 128.673 47.075 9.405 1.00 60.37 C
ATOM 14 N9 A B 16 127.434 47.234 8.649 1.00 59.81 N
ATOM 15 C8 A B 16 126.136 47.168 9.108 1.00 59.75 C
ATOM 16 N7 A B 16 125.232 47.318 8.164 1.00 59.18 N
ATOM 17 C5 A B 16 125.985 47.501 7.010 1.00 58.91 C
ATOM 18 C6 A B 16 125.623 47.708 5.666 1.00 58.45 C
ATOM 19 N6 A B 16 124.359 47.746 5.239 1.00 58.27 N
ATOM 20 N1 A B 16 126.618 47.871 4.765 1.00 58.53 N
ATOM 21 C2 A B 16 127.888 47.817 5.195 1.00 58.46 C
ATOM 22 N3 A B 16 128.356 47.619 6.427 1.00 58.41 N
ATOM 23 C4 A B 16 127.342 47.466 7.297 1.00 59.11 C
ATOM 24 P G B 17 129.304 50.955 12.300 1.00 56.70 P
ATOM 25 OP1 G B 17 130.406 51.548 13.115 1.00 56.03 O
ATOM 26 OP2 G B 17 127.910 50.936 12.840 1.00 54.26 O
ATOM 27 O5' G B 17 129.298 51.678 10.885 1.00 56.70 O
TER
ATOM 2 P G A 17 129.304 50.955 12.300 1.00 56.70 P
ATOM 3 OP1 G A 17 130.406 51.548 13.115 1.00 56.03 O
ATOM 4 OP2 G A 17 127.910 50.936 12.840 1.00 54.26 O
ATOM 5 O5' G A 17 129.298 51.678 10.885 1.00 56.70 O
ATOM 6 C5' G A 17 130.499 51.760 10.126 1.00 55.43 C
ATOM 7 C4' G A 17 130.210 52.292 8.752 1.00 55.31 C
ATOM 8 O4' G A 17 129.471 51.305 7.994 1.00 56.10 O
ATOM 9 C3' G A 17 129.344 53.536 8.703 1.00 54.70 C
ATOM 10 O3' G A 17 130.159 54.692 8.927 1.00 54.11 O
ATOM 11 C2' G A 17 128.774 53.464 7.284 1.00 54.85 C
ATOM 12 O2' G A 17 129.658 53.924 6.277 1.00 54.07 O
ATOM 13 C1' G A 17 128.579 51.956 7.110 1.00 55.33 C
ATOM 14 N9 G A 17 127.236 51.509 7.437 1.00 55.61 N
ATOM 15 C8 G A 17 126.745 51.223 8.685 1.00 55.62 C
ATOM 16 N7 G A 17 125.495 50.852 8.668 1.00 56.32 N
ATOM 17 C5 G A 17 125.144 50.893 7.328 1.00 57.12 C
ATOM 18 C6 G A 17 123.918 50.592 6.697 1.00 58.69 C
ATOM 19 O6 G A 17 122.869 50.200 7.213 1.00 63.05 O
ATOM 20 N1 G A 17 123.988 50.776 5.318 1.00 57.70 N
ATOM 21 C2 G A 17 125.106 51.177 4.637 1.00 57.12 C
ATOM 22 N2 G A 17 124.974 51.294 3.306 1.00 58.19 N
ATOM 23 N3 G A 17 126.269 51.446 5.217 1.00 56.83 N
ATOM 24 C4 G A 17 126.211 51.291 6.555 1.00 56.49 C
ATOM 25 P A A 18 129.768 55.744 10.081 1.00 52.26 P
ATOM 26 OP1 A A 18 130.810 56.798 10.068 1.00 50.48 O
ATOM 27 OP2 A A 18 129.514 54.979 11.338 1.00 51.45 O
ATOM 28 O5' A A 18 128.405 56.378 9.554 1.00 50.68 O
TER
ATOM 1 O3' U B 15 124.281 48.386 13.123 1.00 72.16 O
ATOM 2 P A B 16 125.449 47.429 13.678 1.00 71.13 P
ATOM 3 OP1 A B 16 124.954 46.031 13.629 1.00 72.62 O
ATOM 4 OP2 A B 16 125.945 47.981 14.963 1.00 71.38 O
ATOM 5 O5' A B 16 126.619 47.561 12.605 1.00 67.89 O
ATOM 6 C5' A B 16 127.931 47.108 12.922 1.00 64.19 C
ATOM 7 C4' A B 16 128.843 47.264 11.732 1.00 61.54 C
ATOM 8 O4' A B 16 128.361 46.451 10.636 1.00 61.46 O
ATOM 9 C3' A B 16 128.887 48.654 11.146 1.00 60.54 C
ATOM 10 O3' A B 16 129.756 49.465 11.913 1.00 57.60 O
ATOM 11 C2' A B 16 129.382 48.390 9.729 1.00 61.30 C
ATOM 12 O2' A B 16 130.776 48.188 9.638 1.00 62.31 O
ATOM 13 C1' A B 16 128.673 47.075 9.405 1.00 60.37 C
ATOM 14 N9 A B 16 127.434 47.234 8.649 1.00 59.81 N
ATOM 15 C8 A B 16 126.136 47.168 9.108 1.00 59.75 C
ATOM 16 N7 A B 16 125.232 47.318 8.164 1.00 59.18 N
ATOM 17 C5 A B 16 125.985 47.501 7.010 1.00 58.91 C
ATOM 18 C6 A B 16 125.623 47.708 5.666 1.00 58.45 C
ATOM 19 N6 A B 16 124.359 47.746 5.239 1.00 58.27 N
ATOM 20 N1 A B 16 126.618 47.871 4.765 1.00 58.53 N
ATOM 21 C2 A B 16 127.888 47.817 5.195 1.00 58.46 C
ATOM 22 N3 A B 16 128.356 47.619 6.427 1.00 58.41 N
ATOM 23 C4 A B 16 127.342 47.466 7.297 1.00 59.11 C
ATOM 24 P G B 17 129.304 50.955 12.300 1.00 56.70 P
ATOM 25 OP1 G B 17 130.406 51.548 13.115 1.00 56.03 O
ATOM 26 OP2 G B 17 127.910 50.936 12.840 1.00 54.26 O
ATOM 27 O5' G B 17 129.298 51.678 10.885 1.00 56.70 O
TER
Atoms:
OP1: (130.406,51.548,13.115)
OP2: (127.910,50.936,12.840)
C3': (129.344,53.536,8.703)
C1': (128.579,51.956,7.110)
C5': (130.499,51.760,10.126)
O6: (122.869,50.200,7.213)
O4': (129.471,51.305,7.994)
C8: (126.745,51.223,8.685)
C2: (125.106,51.177,4.637)
C6: (123.918,50.592,6.697)
C5: (125.144,50.893,7.328)
C4: (126.211,51.291,6.555)
P: (129.304,50.955,12.300)
C4': (130.210,52.292,8.752)
C2': (128.774,53.464,7.284)
O2': (129.658,53.924,6.277)
N1: (123.988,50.776,5.318)
N2: (124.974,51.294,3.306)
N3: (126.269,51.446,5.217)
N7: (125.495,50.852,8.668)
N9: (127.236,51.509,7.437)
O5': (129.298,51.678,10.885)
O3': (130.159,54.692,8.927)
OP2: (127.910,50.936,12.840)
C3': (129.344,53.536,8.703)
C1': (128.579,51.956,7.110)
C5': (130.499,51.760,10.126)
O6: (122.869,50.200,7.213)
O4': (129.471,51.305,7.994)
C8: (126.745,51.223,8.685)
C2: (125.106,51.177,4.637)
C6: (123.918,50.592,6.697)
C5: (125.144,50.893,7.328)
C4: (126.211,51.291,6.555)
P: (129.304,50.955,12.300)
C4': (130.210,52.292,8.752)
C2': (128.774,53.464,7.284)
O2': (129.658,53.924,6.277)
N1: (123.988,50.776,5.318)
N2: (124.974,51.294,3.306)
N3: (126.269,51.446,5.217)
N7: (125.495,50.852,8.668)
N9: (127.236,51.509,7.437)
O5': (129.298,51.678,10.885)
O3': (130.159,54.692,8.927)
OP1: (124.954,46.031,13.629)
OP2: (125.945,47.981,14.963)
C3': (128.887,48.654,11.146)
C1': (128.673,47.075,9.405)
C5': (127.931,47.108,12.922)
O4': (128.361,46.451,10.636)
C8: (126.136,47.168,9.108)
O2': (130.776,48.188,9.638)
C6: (125.623,47.708,5.666)
C5: (125.985,47.501,7.010)
C4: (127.342,47.466,7.297)
P: (125.449,47.429,13.678)
C4': (128.843,47.264,11.732)
C2': (129.382,48.390,9.729)
C2: (127.888,47.817,5.195)
N1: (126.618,47.871,4.765)
N3: (128.356,47.619,6.427)
N6: (124.359,47.746,5.239)
N7: (125.232,47.318,8.164)
N9: (127.434,47.234,8.649)
O5': (126.619,47.561,12.605)
O3': (129.756,49.465,11.913)
OP2: (125.945,47.981,14.963)
C3': (128.887,48.654,11.146)
C1': (128.673,47.075,9.405)
C5': (127.931,47.108,12.922)
O4': (128.361,46.451,10.636)
C8: (126.136,47.168,9.108)
O2': (130.776,48.188,9.638)
C6: (125.623,47.708,5.666)
C5: (125.985,47.501,7.010)
C4: (127.342,47.466,7.297)
P: (125.449,47.429,13.678)
C4': (128.843,47.264,11.732)
C2': (129.382,48.390,9.729)
C2: (127.888,47.817,5.195)
N1: (126.618,47.871,4.765)
N3: (128.356,47.619,6.427)
N6: (124.359,47.746,5.239)
N7: (125.232,47.318,8.164)
N9: (127.434,47.234,8.649)
O5': (126.619,47.561,12.605)
O3': (129.756,49.465,11.913)
Image (generated by PyMOL):