ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1616:A1617

Extra

PDB:
ATOM 1 O3' G A1615 63.721 -39.235 15.034 1.00 32.59 O
ATOM 2 P C A1616 63.523 -38.679 13.559 1.00 42.93 P
ATOM 3 OP1 C A1616 64.433 -37.519 13.400 1.00 29.38 O
ATOM 4 OP2 C A1616 62.046 -38.484 13.375 1.00 33.02 O
ATOM 5 O5' C A1616 64.053 -39.891 12.664 1.00 32.93 O
ATOM 6 C5' C A1616 63.478 -40.174 11.403 1.00 34.91 C
ATOM 7 C4' C A1616 63.538 -41.642 11.076 1.00 31.94 C
ATOM 8 O4' C A1616 64.591 -42.273 11.835 1.00 29.29 O
ATOM 9 C3' C A1616 62.305 -42.452 11.419 1.00 32.76 C
ATOM 10 O3' C A1616 61.260 -42.314 10.451 1.00 35.08 O
ATOM 11 C2' C A1616 62.874 -43.865 11.530 1.00 31.86 C
ATOM 12 O2' C A1616 63.121 -44.416 10.252 1.00 40.03 O
ATOM 13 C1' C A1616 64.217 -43.592 12.174 1.00 31.14 C
ATOM 14 N1 C A1616 64.139 -43.707 13.623 1.00 29.63 N
ATOM 15 C2 C A1616 63.995 -44.983 14.145 1.00 33.31 C
ATOM 16 O2 C A1616 63.944 -45.955 13.360 1.00 32.53 O
ATOM 17 N3 C A1616 63.909 -45.118 15.490 1.00 28.77 N
ATOM 18 C4 C A1616 63.966 -44.053 16.272 1.00 25.04 C
ATOM 19 N4 C A1616 63.856 -44.240 17.569 1.00 26.24 N
ATOM 20 C5 C A1616 64.121 -42.741 15.768 1.00 29.94 C
ATOM 21 C6 C A1616 64.194 -42.622 14.437 1.00 30.22 C
ATOM 22 P A A1617 59.764 -41.829 10.895 1.00 38.15 P
ATOM 23 OP1 A A1617 59.072 -41.325 9.678 1.00 41.85 O
ATOM 24 OP2 A A1617 59.915 -40.903 12.056 1.00 38.13 O
ATOM 25 O5' A A1617 59.090 -43.178 11.367 1.00 29.37 O
TER

ATOM 1 O3' C B1616 61.260 -42.314 10.451 1.00 35.08 O
ATOM 2 P A B1617 59.764 -41.829 10.895 1.00 38.15 P
ATOM 3 OP1 A B1617 59.072 -41.325 9.678 1.00 41.85 O
ATOM 4 OP2 A B1617 59.915 -40.903 12.056 1.00 38.13 O
ATOM 5 O5' A B1617 59.090 -43.178 11.367 1.00 29.37 O
ATOM 6 C5' A B1617 59.579 -44.440 10.943 1.00 27.58 C
ATOM 7 C4' A B1617 59.352 -45.480 12.008 1.00 32.02 C
ATOM 8 O4' A B1617 60.474 -45.477 12.919 1.00 29.44 O
ATOM 9 C3' A B1617 58.152 -45.234 12.911 1.00 34.04 C
ATOM 10 O3' A B1617 56.918 -45.686 12.364 1.00 33.40 O
ATOM 11 C2' A B1617 58.540 -45.951 14.171 1.00 27.98 C
ATOM 12 O2' A B1617 58.374 -47.332 13.992 1.00 39.43 O
ATOM 13 C1' A B1617 60.030 -45.660 14.235 1.00 28.11 C
ATOM 14 N9 A B1617 60.328 -44.435 15.000 1.00 26.07 N
ATOM 15 C8 A B1617 60.512 -43.167 14.518 1.00 29.85 C
ATOM 16 N7 A B1617 60.751 -42.280 15.455 1.00 31.84 N
ATOM 17 C5 A B1617 60.739 -43.019 16.628 1.00 24.39 C
ATOM 18 C6 A B1617 60.932 -42.687 17.966 1.00 27.04 C
ATOM 19 N6 A B1617 61.198 -41.470 18.421 1.00 32.37 N
ATOM 20 N1 A B1617 60.845 -43.674 18.865 1.00 33.56 N
ATOM 21 C2 A B1617 60.574 -44.912 18.468 1.00 34.19 C
ATOM 22 N3 A B1617 60.380 -45.338 17.234 1.00 34.49 N
ATOM 23 C4 A B1617 60.483 -44.338 16.358 1.00 24.43 C
ATOM 24 P A B1618 55.570 -44.823 12.616 1.00 48.98 P
ATOM 25 OP1 A B1618 54.455 -45.472 11.869 1.00 44.15 O
ATOM 26 OP2 A B1618 55.895 -43.390 12.311 1.00 35.62 O
ATOM 27 O5' A B1618 55.336 -45.014 14.170 1.00 29.24 O
TER

Atoms:
C2: (63.995,-44.983,14.145)
OP1: (64.433,-37.519,13.400)
OP2: (62.046,-38.484,13.375)
C4: (63.966,-44.053,16.272)
O5': (64.053,-39.891,12.664)
C3': (62.305,-42.452,11.419)
C1': (64.217,-43.592,12.174)
O4': (64.591,-42.273,11.835)
C5': (63.478,-40.174,11.403)
P: (63.523,-38.679,13.559)
O2: (63.944,-45.955,13.360)
C4': (63.538,-41.642,11.076)
C2': (62.874,-43.865,11.530)
O2': (63.121,-44.416,10.252)
N1: (64.139,-43.707,13.623)
N3: (63.909,-45.118,15.490)
N4: (63.856,-44.240,17.569)
C6: (64.194,-42.622,14.437)
C5: (64.121,-42.741,15.768)
O3': (61.260,-42.314,10.451)
OP1: (59.072,-41.325,9.678)
OP2: (59.915,-40.903,12.056)
C3': (58.152,-45.234,12.911)
C1': (60.030,-45.660,14.235)
C5': (59.579,-44.440,10.943)
O4': (60.474,-45.477,12.919)
C8: (60.512,-43.167,14.518)
O2': (58.374,-47.332,13.992)
C6: (60.932,-42.687,17.966)
C5: (60.739,-43.019,16.628)
C4: (60.483,-44.338,16.358)
P: (59.764,-41.829,10.895)
C4': (59.352,-45.480,12.008)
C2': (58.540,-45.951,14.171)
C2: (60.574,-44.912,18.468)
N1: (60.845,-43.674,18.865)
N3: (60.380,-45.338,17.234)
N6: (61.198,-41.470,18.421)
N7: (60.751,-42.280,15.455)
N9: (60.328,-44.435,15.000)
O5': (59.090,-43.178,11.367)
O3': (56.918,-45.686,12.364)
Image (generated by PyMOL):
PyMOL image
show in jmol