ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8O:A348:A347

Extra

PDB:
ATOM 1 O3' A A 347 -18.843 40.482 135.761 1.00 27.42 O
ATOM 2 P G A 348 -18.069 41.329 134.629 1.00 39.70 P
ATOM 3 OP1 G A 348 -17.335 40.352 133.761 1.00 39.70 O
ATOM 4 OP2 G A 348 -17.287 42.392 135.326 1.00 39.70 O
ATOM 5 O5' G A 348 -19.274 41.985 133.817 1.00 39.70 O
ATOM 6 C5' G A 348 -20.262 41.172 133.210 1.00 39.70 C
ATOM 7 C4' G A 348 -21.284 42.003 132.497 1.00 39.70 C
ATOM 8 O4' G A 348 -21.838 42.978 133.403 1.00 39.70 O
ATOM 9 C3' G A 348 -20.773 42.829 131.332 1.00 39.70 C
ATOM 10 O3' G A 348 -20.648 42.069 130.149 1.00 39.70 O
ATOM 11 C2' G A 348 -21.807 43.937 131.225 1.00 39.70 C
ATOM 12 O2' G A 348 -22.913 43.518 130.441 1.00 39.70 O
ATOM 13 C1' G A 348 -22.265 44.101 132.680 1.00 39.70 C
ATOM 14 N9 G A 348 -21.722 45.319 133.308 1.00 38.87 N
ATOM 15 C8 G A 348 -20.543 45.576 133.969 1.00 38.87 C
ATOM 16 N7 G A 348 -20.454 46.814 134.371 1.00 38.87 N
ATOM 17 C5 G A 348 -21.650 47.388 133.947 1.00 38.87 C
ATOM 18 C6 G A 348 -22.177 48.701 134.069 1.00 38.87 C
ATOM 19 O6 G A 348 -21.669 49.691 134.609 1.00 38.87 O
ATOM 20 N1 G A 348 -23.433 48.820 133.478 1.00 38.87 N
ATOM 21 C2 G A 348 -24.120 47.821 132.846 1.00 38.87 C
ATOM 22 N2 G A 348 -25.318 48.132 132.336 1.00 38.87 N
ATOM 23 N3 G A 348 -23.651 46.605 132.728 1.00 38.87 N
ATOM 24 C4 G A 348 -22.434 46.474 133.296 1.00 38.87 C
ATOM 25 P G A 349 -19.741 42.595 128.939 1.00 37.93 P
ATOM 26 OP1 G A 349 -19.588 41.464 127.995 1.00 37.93 O
ATOM 27 OP2 G A 349 -18.524 43.196 129.527 1.00 37.93 O
ATOM 28 O5' G A 349 -20.643 43.731 128.287 1.00 37.93 O
TER

ATOM 1 O3' G B 346 -17.921 41.749 141.173 1.00 24.63 O
ATOM 2 P A B 347 -17.146 42.284 139.870 1.00 27.42 P
ATOM 3 OP1 A B 347 -15.780 41.676 139.901 1.00 27.42 O
ATOM 4 OP2 A B 347 -17.275 43.761 139.838 1.00 27.42 O
ATOM 5 O5' A B 347 -18.004 41.648 138.702 1.00 27.42 O
ATOM 6 C5' A B 347 -18.804 40.500 138.948 1.00 27.42 C
ATOM 7 C4' A B 347 -19.917 40.396 137.955 1.00 27.42 C
ATOM 8 O4' A B 347 -21.127 40.994 138.499 1.00 27.42 O
ATOM 9 C3' A B 347 -19.696 41.151 136.663 1.00 27.42 C
ATOM 10 O3' A B 347 -18.843 40.482 135.761 1.00 27.42 O
ATOM 11 C2' A B 347 -21.110 41.342 136.161 1.00 27.42 C
ATOM 12 O2' A B 347 -21.630 40.128 135.657 1.00 27.42 O
ATOM 13 C1' A B 347 -21.818 41.676 137.470 1.00 27.42 C
ATOM 14 N9 A B 347 -21.741 43.111 137.748 1.00 27.19 N
ATOM 15 C8 A B 347 -20.774 43.748 138.476 1.00 27.19 C
ATOM 16 N7 A B 347 -20.933 45.048 138.529 1.00 27.19 N
ATOM 17 C5 A B 347 -22.068 45.263 137.760 1.00 27.19 C
ATOM 18 C6 A B 347 -22.759 46.437 137.428 1.00 27.19 C
ATOM 19 N6 A B 347 -22.372 47.635 137.848 1.00 27.19 N
ATOM 20 N1 A B 347 -23.859 46.321 136.645 1.00 27.19 N
ATOM 21 C2 A B 347 -24.224 45.091 136.226 1.00 27.19 C
ATOM 22 N3 A B 347 -23.658 43.903 136.479 1.00 27.19 N
ATOM 23 C4 A B 347 -22.572 44.072 137.262 1.00 27.19 C
ATOM 24 P G B 348 -18.069 41.329 134.629 1.00 39.70 P
ATOM 25 OP1 G B 348 -17.335 40.352 133.761 1.00 39.70 O
ATOM 26 OP2 G B 348 -17.287 42.392 135.326 1.00 39.70 O
ATOM 27 O5' G B 348 -19.274 41.985 133.817 1.00 39.70 O
TER

Atoms:
OP1: (-17.335,40.352,133.761)
OP2: (-17.287,42.392,135.326)
C3': (-20.773,42.829,131.332)
C1': (-22.265,44.101,132.680)
C5': (-20.262,41.172,133.210)
O6: (-21.669,49.691,134.609)
O4': (-21.838,42.978,133.403)
C8: (-20.543,45.576,133.969)
C2: (-24.120,47.821,132.846)
C6: (-22.177,48.701,134.069)
C5: (-21.650,47.388,133.947)
C4: (-22.434,46.474,133.296)
P: (-18.069,41.329,134.629)
C4': (-21.284,42.003,132.497)
C2': (-21.807,43.937,131.225)
O2': (-22.913,43.518,130.441)
N1: (-23.433,48.820,133.478)
N2: (-25.318,48.132,132.336)
N3: (-23.651,46.605,132.728)
N7: (-20.454,46.814,134.371)
N9: (-21.722,45.319,133.308)
O5': (-19.274,41.985,133.817)
O3': (-20.648,42.069,130.149)
OP1: (-15.780,41.676,139.901)
OP2: (-17.275,43.761,139.838)
C3': (-19.696,41.151,136.663)
C1': (-21.818,41.676,137.470)
C5': (-18.804,40.500,138.948)
O4': (-21.127,40.994,138.499)
C8: (-20.774,43.748,138.476)
O2': (-21.630,40.128,135.657)
C6: (-22.759,46.437,137.428)
C5: (-22.068,45.263,137.760)
C4: (-22.572,44.072,137.262)
P: (-17.146,42.284,139.870)
C4': (-19.917,40.396,137.955)
C2': (-21.110,41.342,136.161)
C2: (-24.224,45.091,136.226)
N1: (-23.859,46.321,136.645)
N3: (-23.658,43.903,136.479)
N6: (-22.372,47.635,137.848)
N7: (-20.933,45.048,138.529)
N9: (-21.741,43.111,137.748)
O5': (-18.004,41.648,138.702)
O3': (-18.843,40.482,135.761)
Image (generated by PyMOL):
PyMOL image
show in jmol