Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01052:01051
Extra
PDB:
ATOM 1 O3' A A1051 6.251 106.485 97.954 1.00 53.25 O
ATOM 2 P G A1052 6.726 106.321 99.472 1.00 53.02 P
ATOM 3 OP1 G A1052 6.131 107.450 100.223 1.00 54.07 O
ATOM 4 OP2 G A1052 8.195 106.117 99.491 1.00 52.33 O
ATOM 5 O5' G A1052 6.017 104.978 99.958 1.00 53.42 O
ATOM 6 C5' G A1052 4.605 104.946 100.219 1.00 50.86 C
ATOM 7 C4' G A1052 4.163 103.547 100.556 1.00 50.45 C
ATOM 8 O4' G A1052 4.604 102.662 99.500 1.00 50.12 O
ATOM 9 C3' G A1052 4.745 102.902 101.800 1.00 51.01 C
ATOM 10 O3' G A1052 4.089 103.284 102.996 1.00 52.23 O
ATOM 11 C2' G A1052 4.496 101.433 101.517 1.00 52.70 C
ATOM 12 O2' G A1052 3.130 101.098 101.690 1.00 53.18 O
ATOM 13 C1' G A1052 4.842 101.367 100.033 1.00 51.82 C
ATOM 14 N9 G A1052 6.236 101.007 99.781 1.00 51.97 N
ATOM 15 C8 G A1052 7.263 101.858 99.450 1.00 54.89 C
ATOM 16 N7 G A1052 8.398 101.243 99.252 1.00 55.12 N
ATOM 17 C5 G A1052 8.106 99.905 99.471 1.00 53.50 C
ATOM 18 C6 G A1052 8.941 98.758 99.396 1.00 54.34 C
ATOM 19 O6 G A1052 10.140 98.694 99.099 1.00 54.07 O
ATOM 20 N1 G A1052 8.243 97.598 99.707 1.00 53.65 N
ATOM 21 C2 G A1052 6.916 97.542 100.039 1.00 52.49 C
ATOM 22 N2 G A1052 6.437 96.323 100.308 1.00 51.43 N
ATOM 23 N3 G A1052 6.122 98.601 100.104 1.00 51.26 N
ATOM 24 C4 G A1052 6.778 99.741 99.810 1.00 51.58 C
ATOM 25 P G A1053 4.894 103.235 104.388 1.00 54.25 P
ATOM 26 OP1 G A1053 3.936 103.528 105.478 1.00 53.99 O
ATOM 27 OP2 G A1053 6.096 104.092 104.232 1.00 56.83 O
ATOM 28 O5' G A1053 5.391 101.719 104.512 1.00 52.40 O
TER
ATOM 1 O3' U B1050 9.889 108.203 93.461 1.00 51.83 O
ATOM 2 P A B1051 10.080 108.070 95.046 1.00 54.70 P
ATOM 3 OP1 A B1051 9.849 109.431 95.605 1.00 54.07 O
ATOM 4 OP2 A B1051 11.369 107.364 95.314 1.00 54.37 O
ATOM 5 O5' A B1051 8.904 107.086 95.485 1.00 54.70 O
ATOM 6 C5' A B1051 7.532 107.416 95.206 1.00 54.92 C
ATOM 7 C4' A B1051 6.625 106.269 95.572 1.00 54.08 C
ATOM 8 O4' A B1051 6.836 105.142 94.685 1.00 53.31 O
ATOM 9 C3' A B1051 6.838 105.678 96.950 1.00 53.96 C
ATOM 10 O3' A B1051 6.251 106.485 97.954 1.00 53.25 O
ATOM 11 C2' A B1051 6.173 104.315 96.814 1.00 53.27 C
ATOM 12 O2' A B1051 4.767 104.355 96.914 1.00 53.29 O
ATOM 13 C1' A B1051 6.569 103.937 95.387 1.00 52.48 C
ATOM 14 N9 A B1051 7.773 103.112 95.376 1.00 52.31 N
ATOM 15 C8 A B1051 9.070 103.478 95.129 1.00 51.36 C
ATOM 16 N7 A B1051 9.922 102.485 95.213 1.00 51.82 N
ATOM 17 C5 A B1051 9.131 101.393 95.536 1.00 53.08 C
ATOM 18 C6 A B1051 9.430 100.040 95.767 1.00 53.26 C
ATOM 19 N6 A B1051 10.658 99.527 95.705 1.00 54.26 N
ATOM 20 N1 A B1051 8.407 99.216 96.068 1.00 52.93 N
ATOM 21 C2 A B1051 7.173 99.723 96.133 1.00 52.33 C
ATOM 22 N3 A B1051 6.765 100.969 95.939 1.00 53.20 N
ATOM 23 C4 A B1051 7.805 101.765 95.638 1.00 53.39 C
ATOM 24 P G B1052 6.726 106.321 99.472 1.00 53.02 P
ATOM 25 OP1 G B1052 6.131 107.450 100.223 1.00 54.07 O
ATOM 26 OP2 G B1052 8.195 106.117 99.491 1.00 52.33 O
ATOM 27 O5' G B1052 6.017 104.978 99.958 1.00 53.42 O
TER
ATOM 2 P G A1052 6.726 106.321 99.472 1.00 53.02 P
ATOM 3 OP1 G A1052 6.131 107.450 100.223 1.00 54.07 O
ATOM 4 OP2 G A1052 8.195 106.117 99.491 1.00 52.33 O
ATOM 5 O5' G A1052 6.017 104.978 99.958 1.00 53.42 O
ATOM 6 C5' G A1052 4.605 104.946 100.219 1.00 50.86 C
ATOM 7 C4' G A1052 4.163 103.547 100.556 1.00 50.45 C
ATOM 8 O4' G A1052 4.604 102.662 99.500 1.00 50.12 O
ATOM 9 C3' G A1052 4.745 102.902 101.800 1.00 51.01 C
ATOM 10 O3' G A1052 4.089 103.284 102.996 1.00 52.23 O
ATOM 11 C2' G A1052 4.496 101.433 101.517 1.00 52.70 C
ATOM 12 O2' G A1052 3.130 101.098 101.690 1.00 53.18 O
ATOM 13 C1' G A1052 4.842 101.367 100.033 1.00 51.82 C
ATOM 14 N9 G A1052 6.236 101.007 99.781 1.00 51.97 N
ATOM 15 C8 G A1052 7.263 101.858 99.450 1.00 54.89 C
ATOM 16 N7 G A1052 8.398 101.243 99.252 1.00 55.12 N
ATOM 17 C5 G A1052 8.106 99.905 99.471 1.00 53.50 C
ATOM 18 C6 G A1052 8.941 98.758 99.396 1.00 54.34 C
ATOM 19 O6 G A1052 10.140 98.694 99.099 1.00 54.07 O
ATOM 20 N1 G A1052 8.243 97.598 99.707 1.00 53.65 N
ATOM 21 C2 G A1052 6.916 97.542 100.039 1.00 52.49 C
ATOM 22 N2 G A1052 6.437 96.323 100.308 1.00 51.43 N
ATOM 23 N3 G A1052 6.122 98.601 100.104 1.00 51.26 N
ATOM 24 C4 G A1052 6.778 99.741 99.810 1.00 51.58 C
ATOM 25 P G A1053 4.894 103.235 104.388 1.00 54.25 P
ATOM 26 OP1 G A1053 3.936 103.528 105.478 1.00 53.99 O
ATOM 27 OP2 G A1053 6.096 104.092 104.232 1.00 56.83 O
ATOM 28 O5' G A1053 5.391 101.719 104.512 1.00 52.40 O
TER
ATOM 1 O3' U B1050 9.889 108.203 93.461 1.00 51.83 O
ATOM 2 P A B1051 10.080 108.070 95.046 1.00 54.70 P
ATOM 3 OP1 A B1051 9.849 109.431 95.605 1.00 54.07 O
ATOM 4 OP2 A B1051 11.369 107.364 95.314 1.00 54.37 O
ATOM 5 O5' A B1051 8.904 107.086 95.485 1.00 54.70 O
ATOM 6 C5' A B1051 7.532 107.416 95.206 1.00 54.92 C
ATOM 7 C4' A B1051 6.625 106.269 95.572 1.00 54.08 C
ATOM 8 O4' A B1051 6.836 105.142 94.685 1.00 53.31 O
ATOM 9 C3' A B1051 6.838 105.678 96.950 1.00 53.96 C
ATOM 10 O3' A B1051 6.251 106.485 97.954 1.00 53.25 O
ATOM 11 C2' A B1051 6.173 104.315 96.814 1.00 53.27 C
ATOM 12 O2' A B1051 4.767 104.355 96.914 1.00 53.29 O
ATOM 13 C1' A B1051 6.569 103.937 95.387 1.00 52.48 C
ATOM 14 N9 A B1051 7.773 103.112 95.376 1.00 52.31 N
ATOM 15 C8 A B1051 9.070 103.478 95.129 1.00 51.36 C
ATOM 16 N7 A B1051 9.922 102.485 95.213 1.00 51.82 N
ATOM 17 C5 A B1051 9.131 101.393 95.536 1.00 53.08 C
ATOM 18 C6 A B1051 9.430 100.040 95.767 1.00 53.26 C
ATOM 19 N6 A B1051 10.658 99.527 95.705 1.00 54.26 N
ATOM 20 N1 A B1051 8.407 99.216 96.068 1.00 52.93 N
ATOM 21 C2 A B1051 7.173 99.723 96.133 1.00 52.33 C
ATOM 22 N3 A B1051 6.765 100.969 95.939 1.00 53.20 N
ATOM 23 C4 A B1051 7.805 101.765 95.638 1.00 53.39 C
ATOM 24 P G B1052 6.726 106.321 99.472 1.00 53.02 P
ATOM 25 OP1 G B1052 6.131 107.450 100.223 1.00 54.07 O
ATOM 26 OP2 G B1052 8.195 106.117 99.491 1.00 52.33 O
ATOM 27 O5' G B1052 6.017 104.978 99.958 1.00 53.42 O
TER
Atoms:
OP1: (6.131,107.450,100.223)
OP2: (8.195,106.117,99.491)
C3': (4.745,102.902,101.800)
C1': (4.842,101.367,100.033)
C5': (4.605,104.946,100.219)
O6: (10.140,98.694,99.099)
O4': (4.604,102.662,99.500)
C8: (7.263,101.858,99.450)
C2: (6.916,97.542,100.039)
C6: (8.941,98.758,99.396)
C5: (8.106,99.905,99.471)
C4: (6.778,99.741,99.810)
P: (6.726,106.321,99.472)
C4': (4.163,103.547,100.556)
C2': (4.496,101.433,101.517)
O2': (3.130,101.098,101.690)
N1: (8.243,97.598,99.707)
N2: (6.437,96.323,100.308)
N3: (6.122,98.601,100.104)
N7: (8.398,101.243,99.252)
N9: (6.236,101.007,99.781)
O5': (6.017,104.978,99.958)
O3': (4.089,103.284,102.996)
OP2: (8.195,106.117,99.491)
C3': (4.745,102.902,101.800)
C1': (4.842,101.367,100.033)
C5': (4.605,104.946,100.219)
O6: (10.140,98.694,99.099)
O4': (4.604,102.662,99.500)
C8: (7.263,101.858,99.450)
C2: (6.916,97.542,100.039)
C6: (8.941,98.758,99.396)
C5: (8.106,99.905,99.471)
C4: (6.778,99.741,99.810)
P: (6.726,106.321,99.472)
C4': (4.163,103.547,100.556)
C2': (4.496,101.433,101.517)
O2': (3.130,101.098,101.690)
N1: (8.243,97.598,99.707)
N2: (6.437,96.323,100.308)
N3: (6.122,98.601,100.104)
N7: (8.398,101.243,99.252)
N9: (6.236,101.007,99.781)
O5': (6.017,104.978,99.958)
O3': (4.089,103.284,102.996)
OP1: (9.849,109.431,95.605)
OP2: (11.369,107.364,95.314)
C3': (6.838,105.678,96.950)
C1': (6.569,103.937,95.387)
C5': (7.532,107.416,95.206)
O4': (6.836,105.142,94.685)
C8: (9.070,103.478,95.129)
O2': (4.767,104.355,96.914)
C6: (9.430,100.040,95.767)
C5: (9.131,101.393,95.536)
C4: (7.805,101.765,95.638)
P: (10.080,108.070,95.046)
C4': (6.625,106.269,95.572)
C2': (6.173,104.315,96.814)
C2: (7.173,99.723,96.133)
N1: (8.407,99.216,96.068)
N3: (6.765,100.969,95.939)
N6: (10.658,99.527,95.705)
N7: (9.922,102.485,95.213)
N9: (7.773,103.112,95.376)
O5': (8.904,107.086,95.485)
O3': (6.251,106.485,97.954)
OP2: (11.369,107.364,95.314)
C3': (6.838,105.678,96.950)
C1': (6.569,103.937,95.387)
C5': (7.532,107.416,95.206)
O4': (6.836,105.142,94.685)
C8: (9.070,103.478,95.129)
O2': (4.767,104.355,96.914)
C6: (9.430,100.040,95.767)
C5: (9.131,101.393,95.536)
C4: (7.805,101.765,95.638)
P: (10.080,108.070,95.046)
C4': (6.625,106.269,95.572)
C2': (6.173,104.315,96.814)
C2: (7.173,99.723,96.133)
N1: (8.407,99.216,96.068)
N3: (6.765,100.969,95.939)
N6: (10.658,99.527,95.705)
N7: (9.922,102.485,95.213)
N9: (7.773,103.112,95.376)
O5': (8.904,107.086,95.485)
O3': (6.251,106.485,97.954)
Image (generated by PyMOL):