Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2B2D:R2:R4
Extra
PDB:
ATOM 1 O3' U A 1 -57.702 65.030 61.516 0.50 56.46 O
ATOM 2 P C A 2 -59.105 65.799 61.474 0.50 55.21 P
ATOM 3 OP1 C A 2 -58.852 67.235 61.254 0.50 55.20 O
ATOM 4 OP2 C A 2 -59.909 65.355 62.638 0.50 55.00 O
ATOM 5 O5' C A 2 -59.805 65.247 60.164 0.50 56.75 O
ATOM 6 C5' C A 2 -59.264 65.547 58.893 0.50 59.20 C
ATOM 7 C4' C A 2 -60.059 64.861 57.815 0.50 61.22 C
ATOM 8 O4' C A 2 -60.069 63.425 58.081 0.50 61.58 O
ATOM 9 C3' C A 2 -61.534 65.232 57.768 0.50 61.98 C
ATOM 10 O3' C A 2 -61.778 66.462 57.079 0.50 64.12 O
ATOM 11 C2' C A 2 -62.147 64.018 57.077 0.50 61.49 C
ATOM 12 O2' C A 2 -62.014 64.044 55.672 0.50 60.09 O
ATOM 13 C1' C A 2 -61.310 62.875 57.662 0.50 61.38 C
ATOM 14 N1 C A 2 -61.966 62.190 58.795 0.50 61.23 N
ATOM 15 C2 C A 2 -63.033 61.330 58.517 0.50 60.82 C
ATOM 16 O2 C A 2 -63.379 61.178 57.338 0.50 60.93 O
ATOM 17 N3 C A 2 -63.657 60.688 59.535 0.50 60.09 N
ATOM 18 C4 C A 2 -63.255 60.879 60.790 0.50 60.06 C
ATOM 19 N4 C A 2 -63.910 60.219 61.755 0.50 59.30 N
ATOM 20 C5 C A 2 -62.168 61.753 61.108 0.50 60.60 C
ATOM 21 C6 C A 2 -61.557 62.383 60.087 0.50 61.19 C
ATOM 22 P U A 3 -63.224 67.164 57.195 0.50 66.29 P
ATOM 23 OP1 U A 3 -63.134 68.504 56.557 0.50 65.71 O
ATOM 24 OP2 U A 3 -63.636 67.075 58.633 0.50 65.34 O
ATOM 25 O5' U A 3 -64.143 66.217 56.289 0.50 67.66 O
TER
ATOM 1 O3' U B 3 -66.778 63.283 54.655 0.50 71.40 O
ATOM 2 P A B 4 -68.310 63.732 54.877 0.50 71.04 P
ATOM 3 OP1 A B 4 -69.019 63.583 53.562 0.50 70.77 O
ATOM 4 OP2 A B 4 -68.293 65.057 55.556 0.50 71.01 O
ATOM 5 O5' A B 4 -68.876 62.676 55.929 0.50 68.37 O
ATOM 6 C5' A B 4 -68.823 61.283 55.637 0.50 63.56 C
ATOM 7 C4' A B 4 -68.764 60.484 56.911 0.50 59.76 C
ATOM 8 O4' A B 4 -67.610 60.940 57.680 0.50 58.37 O
ATOM 9 C3' A B 4 -69.988 60.812 57.764 0.50 57.33 C
ATOM 10 O3' A B 4 -70.667 59.648 58.248 0.50 55.23 O
ATOM 11 C2' A B 4 -69.533 61.857 58.799 0.50 56.66 C
ATOM 12 O2' A B 4 -70.021 61.532 60.090 0.50 56.85 O
ATOM 13 C1' A B 4 -68.031 61.581 58.869 0.50 56.13 C
ATOM 14 N9 A B 4 -67.070 62.612 59.271 0.50 54.05 N
ATOM 15 C8 A B 4 -66.448 63.587 58.525 0.50 53.28 C
ATOM 16 N7 A B 4 -65.581 64.300 59.207 0.50 52.89 N
ATOM 17 C5 A B 4 -65.644 63.773 60.492 0.50 52.89 C
ATOM 18 C6 A B 4 -64.953 64.096 61.684 0.50 53.36 C
ATOM 19 N6 A B 4 -64.028 65.062 61.773 0.50 52.76 N
ATOM 20 N1 A B 4 -65.251 63.380 62.794 0.50 53.70 N
ATOM 21 C2 A B 4 -66.173 62.406 62.699 0.50 53.41 C
ATOM 22 N3 A B 4 -66.880 62.007 61.636 0.50 53.29 N
ATOM 23 C4 A B 4 -66.565 62.745 60.548 0.50 53.24 C
ATOM 24 P A B 5 -72.103 59.255 57.665 0.50 53.00 P
ATOM 25 OP1 A B 5 -71.974 59.214 56.194 0.50 52.94 O
ATOM 26 OP2 A B 5 -73.079 60.189 58.296 0.50 52.30 O
ATOM 27 O5' A B 5 -72.306 57.765 58.199 0.50 49.89 O
TER
ATOM 2 P C A 2 -59.105 65.799 61.474 0.50 55.21 P
ATOM 3 OP1 C A 2 -58.852 67.235 61.254 0.50 55.20 O
ATOM 4 OP2 C A 2 -59.909 65.355 62.638 0.50 55.00 O
ATOM 5 O5' C A 2 -59.805 65.247 60.164 0.50 56.75 O
ATOM 6 C5' C A 2 -59.264 65.547 58.893 0.50 59.20 C
ATOM 7 C4' C A 2 -60.059 64.861 57.815 0.50 61.22 C
ATOM 8 O4' C A 2 -60.069 63.425 58.081 0.50 61.58 O
ATOM 9 C3' C A 2 -61.534 65.232 57.768 0.50 61.98 C
ATOM 10 O3' C A 2 -61.778 66.462 57.079 0.50 64.12 O
ATOM 11 C2' C A 2 -62.147 64.018 57.077 0.50 61.49 C
ATOM 12 O2' C A 2 -62.014 64.044 55.672 0.50 60.09 O
ATOM 13 C1' C A 2 -61.310 62.875 57.662 0.50 61.38 C
ATOM 14 N1 C A 2 -61.966 62.190 58.795 0.50 61.23 N
ATOM 15 C2 C A 2 -63.033 61.330 58.517 0.50 60.82 C
ATOM 16 O2 C A 2 -63.379 61.178 57.338 0.50 60.93 O
ATOM 17 N3 C A 2 -63.657 60.688 59.535 0.50 60.09 N
ATOM 18 C4 C A 2 -63.255 60.879 60.790 0.50 60.06 C
ATOM 19 N4 C A 2 -63.910 60.219 61.755 0.50 59.30 N
ATOM 20 C5 C A 2 -62.168 61.753 61.108 0.50 60.60 C
ATOM 21 C6 C A 2 -61.557 62.383 60.087 0.50 61.19 C
ATOM 22 P U A 3 -63.224 67.164 57.195 0.50 66.29 P
ATOM 23 OP1 U A 3 -63.134 68.504 56.557 0.50 65.71 O
ATOM 24 OP2 U A 3 -63.636 67.075 58.633 0.50 65.34 O
ATOM 25 O5' U A 3 -64.143 66.217 56.289 0.50 67.66 O
TER
ATOM 1 O3' U B 3 -66.778 63.283 54.655 0.50 71.40 O
ATOM 2 P A B 4 -68.310 63.732 54.877 0.50 71.04 P
ATOM 3 OP1 A B 4 -69.019 63.583 53.562 0.50 70.77 O
ATOM 4 OP2 A B 4 -68.293 65.057 55.556 0.50 71.01 O
ATOM 5 O5' A B 4 -68.876 62.676 55.929 0.50 68.37 O
ATOM 6 C5' A B 4 -68.823 61.283 55.637 0.50 63.56 C
ATOM 7 C4' A B 4 -68.764 60.484 56.911 0.50 59.76 C
ATOM 8 O4' A B 4 -67.610 60.940 57.680 0.50 58.37 O
ATOM 9 C3' A B 4 -69.988 60.812 57.764 0.50 57.33 C
ATOM 10 O3' A B 4 -70.667 59.648 58.248 0.50 55.23 O
ATOM 11 C2' A B 4 -69.533 61.857 58.799 0.50 56.66 C
ATOM 12 O2' A B 4 -70.021 61.532 60.090 0.50 56.85 O
ATOM 13 C1' A B 4 -68.031 61.581 58.869 0.50 56.13 C
ATOM 14 N9 A B 4 -67.070 62.612 59.271 0.50 54.05 N
ATOM 15 C8 A B 4 -66.448 63.587 58.525 0.50 53.28 C
ATOM 16 N7 A B 4 -65.581 64.300 59.207 0.50 52.89 N
ATOM 17 C5 A B 4 -65.644 63.773 60.492 0.50 52.89 C
ATOM 18 C6 A B 4 -64.953 64.096 61.684 0.50 53.36 C
ATOM 19 N6 A B 4 -64.028 65.062 61.773 0.50 52.76 N
ATOM 20 N1 A B 4 -65.251 63.380 62.794 0.50 53.70 N
ATOM 21 C2 A B 4 -66.173 62.406 62.699 0.50 53.41 C
ATOM 22 N3 A B 4 -66.880 62.007 61.636 0.50 53.29 N
ATOM 23 C4 A B 4 -66.565 62.745 60.548 0.50 53.24 C
ATOM 24 P A B 5 -72.103 59.255 57.665 0.50 53.00 P
ATOM 25 OP1 A B 5 -71.974 59.214 56.194 0.50 52.94 O
ATOM 26 OP2 A B 5 -73.079 60.189 58.296 0.50 52.30 O
ATOM 27 O5' A B 5 -72.306 57.765 58.199 0.50 49.89 O
TER
Atoms:
C2: (-63.033,61.330,58.517)
OP1: (-58.852,67.235,61.254)
OP2: (-59.909,65.355,62.638)
C4: (-63.255,60.879,60.790)
O5': (-59.805,65.247,60.164)
C3': (-61.534,65.232,57.768)
C1': (-61.310,62.875,57.662)
O4': (-60.069,63.425,58.081)
C5': (-59.264,65.547,58.893)
P: (-59.105,65.799,61.474)
O2: (-63.379,61.178,57.338)
C4': (-60.059,64.861,57.815)
C2': (-62.147,64.018,57.077)
O2': (-62.014,64.044,55.672)
N1: (-61.966,62.190,58.795)
N3: (-63.657,60.688,59.535)
N4: (-63.910,60.219,61.755)
C6: (-61.557,62.383,60.087)
C5: (-62.168,61.753,61.108)
O3': (-61.778,66.462,57.079)
OP1: (-58.852,67.235,61.254)
OP2: (-59.909,65.355,62.638)
C4: (-63.255,60.879,60.790)
O5': (-59.805,65.247,60.164)
C3': (-61.534,65.232,57.768)
C1': (-61.310,62.875,57.662)
O4': (-60.069,63.425,58.081)
C5': (-59.264,65.547,58.893)
P: (-59.105,65.799,61.474)
O2: (-63.379,61.178,57.338)
C4': (-60.059,64.861,57.815)
C2': (-62.147,64.018,57.077)
O2': (-62.014,64.044,55.672)
N1: (-61.966,62.190,58.795)
N3: (-63.657,60.688,59.535)
N4: (-63.910,60.219,61.755)
C6: (-61.557,62.383,60.087)
C5: (-62.168,61.753,61.108)
O3': (-61.778,66.462,57.079)
OP1: (-69.019,63.583,53.562)
OP2: (-68.293,65.057,55.556)
C3': (-69.988,60.812,57.764)
C1': (-68.031,61.581,58.869)
C5': (-68.823,61.283,55.637)
O4': (-67.610,60.940,57.680)
C8: (-66.448,63.587,58.525)
O2': (-70.021,61.532,60.090)
C6: (-64.953,64.096,61.684)
C5: (-65.644,63.773,60.492)
C4: (-66.565,62.745,60.548)
P: (-68.310,63.732,54.877)
C4': (-68.764,60.484,56.911)
C2': (-69.533,61.857,58.799)
C2: (-66.173,62.406,62.699)
N1: (-65.251,63.380,62.794)
N3: (-66.880,62.007,61.636)
N6: (-64.028,65.062,61.773)
N7: (-65.581,64.300,59.207)
N9: (-67.070,62.612,59.271)
O5': (-68.876,62.676,55.929)
O3': (-70.667,59.648,58.248)
OP2: (-68.293,65.057,55.556)
C3': (-69.988,60.812,57.764)
C1': (-68.031,61.581,58.869)
C5': (-68.823,61.283,55.637)
O4': (-67.610,60.940,57.680)
C8: (-66.448,63.587,58.525)
O2': (-70.021,61.532,60.090)
C6: (-64.953,64.096,61.684)
C5: (-65.644,63.773,60.492)
C4: (-66.565,62.745,60.548)
P: (-68.310,63.732,54.877)
C4': (-68.764,60.484,56.911)
C2': (-69.533,61.857,58.799)
C2: (-66.173,62.406,62.699)
N1: (-65.251,63.380,62.794)
N3: (-66.880,62.007,61.636)
N6: (-64.028,65.062,61.773)
N7: (-65.581,64.300,59.207)
N9: (-67.070,62.612,59.271)
O5': (-68.876,62.676,55.929)
O3': (-70.667,59.648,58.248)
Image (generated by PyMOL):