ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 280D:B10:B9

Extra

PDB:
ATOM 1 O3' G A 9 41.261 25.180 30.876 1.00 19.61 O
ATOM 2 P U A 10 42.797 24.723 30.810 1.00 21.22 P
ATOM 3 OP1 U A 10 43.573 25.774 31.491 1.00 25.22 O
ATOM 4 OP2 U A 10 43.100 24.383 29.412 1.00 22.72 O
ATOM 5 O5' U A 10 42.908 23.374 31.638 1.00 20.84 O
ATOM 6 C5' U A 10 42.398 23.287 32.962 1.00 21.93 C
ATOM 7 C4' U A 10 42.262 21.846 33.378 1.00 22.05 C
ATOM 8 O4' U A 10 41.175 21.208 32.660 1.00 18.32 O
ATOM 9 C3' U A 10 43.475 20.975 33.121 1.00 21.98 C
ATOM 10 O3' U A 10 44.398 21.111 34.186 1.00 24.75 O
ATOM 11 C2' U A 10 42.869 19.577 33.098 1.00 22.75 C
ATOM 12 O2' U A 10 42.727 18.925 34.346 1.00 25.15 O
ATOM 13 C1' U A 10 41.502 19.852 32.446 1.00 22.43 C
ATOM 14 N1 U A 10 41.545 19.611 31.002 1.00 21.83 N
ATOM 15 C2 U A 10 41.341 18.313 30.570 1.00 19.72 C
ATOM 16 O2 U A 10 41.138 17.372 31.330 1.00 18.40 O
ATOM 17 N3 U A 10 41.402 18.147 29.215 1.00 28.04 N
ATOM 18 C4 U A 10 41.642 19.114 28.274 1.00 26.41 C
ATOM 19 O4 U A 10 41.706 18.773 27.092 1.00 29.63 O
ATOM 20 C5 U A 10 41.855 20.444 28.796 1.00 21.87 C
ATOM 21 C6 U A 10 41.791 20.644 30.116 1.00 16.52 C
ATOM 22 P C A 11 45.909 20.591 34.024 1.00 24.18 P
ATOM 23 OP1 C A 11 46.531 20.875 35.304 1.00 31.41 O
ATOM 24 OP2 C A 11 46.458 21.165 32.777 1.00 24.69 O
ATOM 25 O5' C A 11 45.868 19.004 33.940 1.00 26.09 O
TER

ATOM 1 O3' C B 8 38.623 26.553 25.706 1.00 28.91 O
ATOM 2 P G B 9 40.095 26.115 26.179 1.00 26.41 P
ATOM 3 OP1 G B 9 40.858 27.348 26.388 1.00 31.84 O
ATOM 4 OP2 G B 9 40.702 25.050 25.343 1.00 27.81 O
ATOM 5 O5' G B 9 39.769 25.424 27.574 1.00 26.69 O
ATOM 6 C5' G B 9 39.239 26.179 28.663 1.00 22.06 C
ATOM 7 C4' G B 9 39.069 25.292 29.866 1.00 20.91 C
ATOM 8 O4' G B 9 38.050 24.310 29.557 1.00 17.30 O
ATOM 9 C3' G B 9 40.268 24.426 30.198 1.00 21.34 C
ATOM 10 O3' G B 9 41.261 25.180 30.876 1.00 19.61 O
ATOM 11 C2' G B 9 39.613 23.338 31.041 1.00 23.07 C
ATOM 12 O2' G B 9 39.267 23.754 32.347 1.00 26.43 O
ATOM 13 C1' G B 9 38.312 23.119 30.267 1.00 19.08 C
ATOM 14 N9 G B 9 38.407 22.032 29.307 1.00 15.77 N
ATOM 15 C8 G B 9 38.708 22.117 27.968 1.00 16.11 C
ATOM 16 N7 G B 9 38.727 20.953 27.380 1.00 13.62 N
ATOM 17 C5 G B 9 38.405 20.057 28.386 1.00 9.55 C
ATOM 18 C6 G B 9 38.285 18.658 28.347 1.00 13.52 C
ATOM 19 O6 G B 9 38.419 17.911 27.378 1.00 23.75 O
ATOM 20 N1 G B 9 37.980 18.124 29.601 1.00 19.13 N
ATOM 21 C2 G B 9 37.821 18.871 30.749 1.00 17.16 C
ATOM 22 N2 G B 9 37.541 18.178 31.847 1.00 14.68 N
ATOM 23 N3 G B 9 37.927 20.190 30.799 1.00 12.98 N
ATOM 24 C4 G B 9 38.215 20.712 29.588 1.00 15.36 C
ATOM 25 P U B 10 42.797 24.723 30.810 1.00 21.22 P
ATOM 26 OP1 U B 10 43.573 25.774 31.491 1.00 25.22 O
ATOM 27 OP2 U B 10 43.100 24.383 29.412 1.00 22.72 O
ATOM 28 O5' U B 10 42.908 23.374 31.638 1.00 20.84 O
TER

Atoms:
C4: (41.642,19.114,28.274)
N3: (41.402,18.147,29.215)
OP1: (43.573,25.774,31.491)
OP2: (43.100,24.383,29.412)
C2: (41.341,18.313,30.570)
C1': (41.502,19.852,32.446)
C3': (43.475,20.975,33.121)
O5': (42.908,23.374,31.638)
O4': (41.175,21.208,32.660)
C5': (42.398,23.287,32.962)
P: (42.797,24.723,30.810)
C4': (42.262,21.846,33.378)
C2': (42.869,19.577,33.098)
O2': (42.727,18.925,34.346)
N1: (41.545,19.611,31.002)
O4: (41.706,18.773,27.092)
O2: (41.138,17.372,31.330)
C6: (41.791,20.644,30.116)
C5: (41.855,20.444,28.796)
O3': (44.398,21.111,34.186)
OP1: (40.858,27.348,26.388)
OP2: (40.702,25.050,25.343)
C3': (40.268,24.426,30.198)
C1': (38.312,23.119,30.267)
C5': (39.239,26.179,28.663)
O6: (38.419,17.911,27.378)
O4': (38.050,24.310,29.557)
C8: (38.708,22.117,27.968)
C2: (37.821,18.871,30.749)
C6: (38.285,18.658,28.347)
C5: (38.405,20.057,28.386)
C4: (38.215,20.712,29.588)
P: (40.095,26.115,26.179)
C4': (39.069,25.292,29.866)
C2': (39.613,23.338,31.041)
O2': (39.267,23.754,32.347)
N1: (37.980,18.124,29.601)
N2: (37.541,18.178,31.847)
N3: (37.927,20.190,30.799)
N7: (38.727,20.953,27.380)
N9: (38.407,22.032,29.307)
O5': (39.769,25.424,27.574)
O3': (41.261,25.180,30.876)
Image (generated by PyMOL):
PyMOL image
show in jmol