ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A807:A806

Extra

PDB:
ATOM 1 O3' A A 806 -9.318 99.986 46.956 1.00 20.82 O
ATOM 2 P G A 807 -8.853 101.539 46.912 1.00 47.68 P
ATOM 3 OP1 G A 807 -7.509 101.602 46.287 1.00 64.84 O
ATOM 4 OP2 G A 807 -9.057 102.131 48.261 1.00 65.63 O
ATOM 5 O5' G A 807 -9.905 102.215 45.917 1.00 37.81 O
ATOM 6 C5' G A 807 -10.259 103.612 46.027 1.00 38.53 C
ATOM 7 C4' G A 807 -11.662 103.846 45.500 1.00 39.62 C
ATOM 8 O4' G A 807 -12.608 103.020 46.241 1.00 40.50 O
ATOM 9 C3' G A 807 -12.173 105.267 45.689 1.00 40.10 C
ATOM 10 O3' G A 807 -11.755 106.168 44.672 1.00 42.27 O
ATOM 11 C2' G A 807 -13.685 105.088 45.751 1.00 40.18 C
ATOM 12 O2' G A 807 -14.314 105.045 44.487 1.00 39.11 O
ATOM 13 C1' G A 807 -13.808 103.746 46.476 1.00 40.10 C
ATOM 14 N9 G A 807 -13.929 103.959 47.916 1.00 59.04 N
ATOM 15 C8 G A 807 -12.949 103.775 48.863 1.00 59.45 C
ATOM 16 N7 G A 807 -13.335 104.097 50.068 1.00 60.16 N
ATOM 17 C5 G A 807 -14.652 104.503 49.911 1.00 60.86 C
ATOM 18 C6 G A 807 -15.589 104.958 50.869 1.00 61.28 C
ATOM 19 O6 G A 807 -15.442 105.090 52.080 1.00 62.93 O
ATOM 20 N1 G A 807 -16.807 105.271 50.287 1.00 60.88 N
ATOM 21 C2 G A 807 -17.093 105.155 48.950 1.00 61.12 C
ATOM 22 N2 G A 807 -18.333 105.513 48.573 1.00 62.59 N
ATOM 23 N3 G A 807 -16.230 104.722 48.044 1.00 60.32 N
ATOM 24 C4 G A 807 -15.037 104.418 48.592 1.00 59.80 C
ATOM 25 P G A 808 -11.661 107.736 45.006 1.00 16.83 P
ATOM 26 OP1 G A 808 -11.332 108.427 43.740 1.00 88.67 O
ATOM 27 OP2 G A 808 -10.791 107.932 46.191 1.00 88.53 O
ATOM 28 O5' G A 808 -13.153 108.121 45.400 1.00 24.33 O
TER

ATOM 1 O3' U B 805 -8.677 94.992 49.473 1.00 7.81 O
ATOM 2 P A B 806 -8.125 96.113 48.473 1.00 66.78 P
ATOM 3 OP1 A B 806 -8.715 95.834 47.137 1.00 70.82 O
ATOM 4 OP2 A B 806 -6.645 96.214 48.618 1.00 69.10 O
ATOM 5 O5' A B 806 -8.803 97.442 49.017 1.00 19.42 O
ATOM 6 C5' A B 806 -10.232 97.557 49.063 1.00 20.96 C
ATOM 7 C4' A B 806 -10.756 98.144 47.767 1.00 21.13 C
ATOM 8 O4' A B 806 -12.185 97.925 47.713 1.00 23.44 O
ATOM 9 C3' A B 806 -10.585 99.642 47.530 1.00 20.72 C
ATOM 10 O3' A B 806 -9.318 99.986 46.956 1.00 20.82 O
ATOM 11 C2' A B 806 -11.705 99.933 46.548 1.00 22.16 C
ATOM 12 O2' A B 806 -11.333 99.536 45.246 1.00 21.18 O
ATOM 13 C1' A B 806 -12.804 98.991 47.032 1.00 23.76 C
ATOM 14 N9 A B 806 -13.713 99.654 47.956 1.00 48.85 N
ATOM 15 C8 A B 806 -13.468 100.008 49.251 1.00 49.13 C
ATOM 16 N7 A B 806 -14.459 100.637 49.822 1.00 50.56 N
ATOM 17 C5 A B 806 -15.427 100.695 48.835 1.00 50.55 C
ATOM 18 C6 A B 806 -16.711 101.253 48.807 1.00 51.06 C
ATOM 19 N6 A B 806 -17.254 101.910 49.836 1.00 51.49 N
ATOM 20 N1 A B 806 -17.428 101.123 47.671 1.00 51.67 N
ATOM 21 C2 A B 806 -16.871 100.487 46.638 1.00 52.02 C
ATOM 22 N3 A B 806 -15.665 99.934 46.540 1.00 51.15 N
ATOM 23 C4 A B 806 -14.987 100.076 47.687 1.00 49.52 C
ATOM 24 P G B 807 -8.853 101.539 46.912 1.00 47.68 P
ATOM 25 OP1 G B 807 -7.509 101.602 46.287 1.00 64.84 O
ATOM 26 OP2 G B 807 -9.057 102.131 48.261 1.00 65.63 O
ATOM 27 O5' G B 807 -9.905 102.215 45.917 1.00 37.81 O
TER

Atoms:
OP1: (-7.509,101.602,46.287)
OP2: (-9.057,102.131,48.261)
C3': (-12.173,105.267,45.689)
C1': (-13.808,103.746,46.476)
C5': (-10.259,103.612,46.027)
O6: (-15.442,105.090,52.080)
O4': (-12.608,103.020,46.241)
C8: (-12.949,103.775,48.863)
C2: (-17.093,105.155,48.950)
C6: (-15.589,104.958,50.869)
C5: (-14.652,104.503,49.911)
C4: (-15.037,104.418,48.592)
P: (-8.853,101.539,46.912)
C4': (-11.662,103.846,45.500)
C2': (-13.685,105.088,45.751)
O2': (-14.314,105.045,44.487)
N1: (-16.807,105.271,50.287)
N2: (-18.333,105.513,48.573)
N3: (-16.230,104.722,48.044)
N7: (-13.335,104.097,50.068)
N9: (-13.929,103.959,47.916)
O5': (-9.905,102.215,45.917)
O3': (-11.755,106.168,44.672)
OP1: (-8.715,95.834,47.137)
OP2: (-6.645,96.214,48.618)
C3': (-10.585,99.642,47.530)
C1': (-12.804,98.991,47.032)
C5': (-10.232,97.557,49.063)
O4': (-12.185,97.925,47.713)
C8: (-13.468,100.008,49.251)
O2': (-11.333,99.536,45.246)
C6: (-16.711,101.253,48.807)
C5: (-15.427,100.695,48.835)
C4: (-14.987,100.076,47.687)
P: (-8.125,96.113,48.473)
C4': (-10.756,98.144,47.767)
C2': (-11.705,99.933,46.548)
C2: (-16.871,100.487,46.638)
N1: (-17.428,101.123,47.671)
N3: (-15.665,99.934,46.540)
N6: (-17.254,101.910,49.836)
N7: (-14.459,100.637,49.822)
N9: (-13.713,99.654,47.956)
O5': (-8.803,97.442,49.017)
O3': (-9.318,99.986,46.956)
Image (generated by PyMOL):
PyMOL image
show in jmol