Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12007:12006
Extra
PDB:
ATOM 1 O3' G A2006 -2.446 -27.693 88.255 1.00 53.30 O
ATOM 2 P U A2007 -1.809 -27.948 89.709 1.00 48.59 P
ATOM 3 OP1 U A2007 -0.839 -29.067 89.591 1.00 48.52 O
ATOM 4 OP2 U A2007 -2.928 -28.070 90.659 1.00 48.91 O
ATOM 5 O5' U A2007 -1.026 -26.603 89.977 1.00 48.36 O
ATOM 6 C5' U A2007 -0.274 -25.971 88.954 1.00 48.06 C
ATOM 7 C4' U A2007 0.276 -24.676 89.450 1.00 47.91 C
ATOM 8 O4' U A2007 -0.669 -23.607 89.205 1.00 47.97 O
ATOM 9 C3' U A2007 0.514 -24.625 90.940 1.00 48.05 C
ATOM 10 O3' U A2007 1.747 -25.233 91.299 1.00 47.94 O
ATOM 11 C2' U A2007 0.470 -23.139 91.225 1.00 47.99 C
ATOM 12 O2' U A2007 1.701 -22.571 90.825 1.00 47.69 O
ATOM 13 C1' U A2007 -0.623 -22.674 90.255 1.00 48.02 C
ATOM 14 N1 U A2007 -1.973 -22.620 90.873 1.00 48.33 N
ATOM 15 C2 U A2007 -2.466 -21.526 91.533 1.00 48.44 C
ATOM 16 O2 U A2007 -1.806 -20.542 91.690 1.00 48.29 O
ATOM 17 N3 U A2007 -3.751 -21.601 92.028 1.00 48.75 N
ATOM 18 C4 U A2007 -4.651 -22.632 91.922 1.00 48.96 C
ATOM 19 O4 U A2007 -5.798 -22.580 92.411 1.00 49.24 O
ATOM 20 C5 U A2007 -4.092 -23.730 91.201 1.00 48.84 C
ATOM 21 C6 U A2007 -2.838 -23.671 90.716 1.00 48.54 C
ATOM 22 P G A2008 2.007 -25.662 92.818 1.00 46.62 P
ATOM 23 OP1 G A2008 3.461 -25.605 93.038 1.00 46.42 O
ATOM 24 OP2 G A2008 1.294 -26.926 93.033 1.00 46.88 O
ATOM 25 O5' G A2008 1.277 -24.497 93.624 1.00 46.76 O
TER
ATOM 1 O3' A B2005 -8.516 -29.190 88.969 1.00 53.14 O
ATOM 2 P G B2006 -7.249 -28.698 89.768 1.00 54.49 P
ATOM 3 OP1 G B2006 -6.470 -29.909 90.115 1.00 54.50 O
ATOM 4 OP2 G B2006 -7.729 -27.813 90.857 1.00 54.62 O
ATOM 5 O5' G B2006 -6.477 -27.855 88.688 1.00 54.13 O
ATOM 6 C5' G B2006 -5.555 -28.479 87.832 1.00 53.93 C
ATOM 7 C4' G B2006 -4.647 -27.472 87.204 1.00 53.59 C
ATOM 8 O4' G B2006 -5.431 -26.333 86.774 1.00 53.60 O
ATOM 9 C3' G B2006 -3.593 -26.868 88.117 1.00 53.43 C
ATOM 10 O3' G B2006 -2.446 -27.693 88.255 1.00 53.30 O
ATOM 11 C2' G B2006 -3.306 -25.535 87.447 1.00 53.19 C
ATOM 12 O2' G B2006 -2.472 -25.734 86.336 1.00 52.94 O
ATOM 13 C1' G B2006 -4.678 -25.149 86.918 1.00 53.37 C
ATOM 14 N9 G B2006 -5.414 -24.216 87.798 1.00 53.53 N
ATOM 15 C8 G B2006 -6.665 -24.442 88.309 1.00 53.85 C
ATOM 16 N7 G B2006 -7.129 -23.438 88.989 1.00 53.94 N
ATOM 17 C5 G B2006 -6.134 -22.476 88.908 1.00 53.67 C
ATOM 18 C6 G B2006 -6.069 -21.166 89.449 1.00 53.64 C
ATOM 19 O6 G B2006 -6.873 -20.548 90.151 1.00 53.85 O
ATOM 20 N1 G B2006 -4.868 -20.554 89.117 1.00 53.34 N
ATOM 21 C2 G B2006 -3.861 -21.095 88.369 1.00 53.09 C
ATOM 22 N2 G B2006 -2.807 -20.312 88.171 1.00 52.83 N
ATOM 23 N3 G B2006 -3.914 -22.304 87.856 1.00 53.12 N
ATOM 24 C4 G B2006 -5.072 -22.938 88.161 1.00 53.41 C
ATOM 25 P U B2007 -1.809 -27.948 89.709 1.00 48.59 P
ATOM 26 OP1 U B2007 -0.839 -29.067 89.591 1.00 48.52 O
ATOM 27 OP2 U B2007 -2.928 -28.070 90.659 1.00 48.91 O
ATOM 28 O5' U B2007 -1.026 -26.603 89.977 1.00 48.36 O
TER
ATOM 2 P U A2007 -1.809 -27.948 89.709 1.00 48.59 P
ATOM 3 OP1 U A2007 -0.839 -29.067 89.591 1.00 48.52 O
ATOM 4 OP2 U A2007 -2.928 -28.070 90.659 1.00 48.91 O
ATOM 5 O5' U A2007 -1.026 -26.603 89.977 1.00 48.36 O
ATOM 6 C5' U A2007 -0.274 -25.971 88.954 1.00 48.06 C
ATOM 7 C4' U A2007 0.276 -24.676 89.450 1.00 47.91 C
ATOM 8 O4' U A2007 -0.669 -23.607 89.205 1.00 47.97 O
ATOM 9 C3' U A2007 0.514 -24.625 90.940 1.00 48.05 C
ATOM 10 O3' U A2007 1.747 -25.233 91.299 1.00 47.94 O
ATOM 11 C2' U A2007 0.470 -23.139 91.225 1.00 47.99 C
ATOM 12 O2' U A2007 1.701 -22.571 90.825 1.00 47.69 O
ATOM 13 C1' U A2007 -0.623 -22.674 90.255 1.00 48.02 C
ATOM 14 N1 U A2007 -1.973 -22.620 90.873 1.00 48.33 N
ATOM 15 C2 U A2007 -2.466 -21.526 91.533 1.00 48.44 C
ATOM 16 O2 U A2007 -1.806 -20.542 91.690 1.00 48.29 O
ATOM 17 N3 U A2007 -3.751 -21.601 92.028 1.00 48.75 N
ATOM 18 C4 U A2007 -4.651 -22.632 91.922 1.00 48.96 C
ATOM 19 O4 U A2007 -5.798 -22.580 92.411 1.00 49.24 O
ATOM 20 C5 U A2007 -4.092 -23.730 91.201 1.00 48.84 C
ATOM 21 C6 U A2007 -2.838 -23.671 90.716 1.00 48.54 C
ATOM 22 P G A2008 2.007 -25.662 92.818 1.00 46.62 P
ATOM 23 OP1 G A2008 3.461 -25.605 93.038 1.00 46.42 O
ATOM 24 OP2 G A2008 1.294 -26.926 93.033 1.00 46.88 O
ATOM 25 O5' G A2008 1.277 -24.497 93.624 1.00 46.76 O
TER
ATOM 1 O3' A B2005 -8.516 -29.190 88.969 1.00 53.14 O
ATOM 2 P G B2006 -7.249 -28.698 89.768 1.00 54.49 P
ATOM 3 OP1 G B2006 -6.470 -29.909 90.115 1.00 54.50 O
ATOM 4 OP2 G B2006 -7.729 -27.813 90.857 1.00 54.62 O
ATOM 5 O5' G B2006 -6.477 -27.855 88.688 1.00 54.13 O
ATOM 6 C5' G B2006 -5.555 -28.479 87.832 1.00 53.93 C
ATOM 7 C4' G B2006 -4.647 -27.472 87.204 1.00 53.59 C
ATOM 8 O4' G B2006 -5.431 -26.333 86.774 1.00 53.60 O
ATOM 9 C3' G B2006 -3.593 -26.868 88.117 1.00 53.43 C
ATOM 10 O3' G B2006 -2.446 -27.693 88.255 1.00 53.30 O
ATOM 11 C2' G B2006 -3.306 -25.535 87.447 1.00 53.19 C
ATOM 12 O2' G B2006 -2.472 -25.734 86.336 1.00 52.94 O
ATOM 13 C1' G B2006 -4.678 -25.149 86.918 1.00 53.37 C
ATOM 14 N9 G B2006 -5.414 -24.216 87.798 1.00 53.53 N
ATOM 15 C8 G B2006 -6.665 -24.442 88.309 1.00 53.85 C
ATOM 16 N7 G B2006 -7.129 -23.438 88.989 1.00 53.94 N
ATOM 17 C5 G B2006 -6.134 -22.476 88.908 1.00 53.67 C
ATOM 18 C6 G B2006 -6.069 -21.166 89.449 1.00 53.64 C
ATOM 19 O6 G B2006 -6.873 -20.548 90.151 1.00 53.85 O
ATOM 20 N1 G B2006 -4.868 -20.554 89.117 1.00 53.34 N
ATOM 21 C2 G B2006 -3.861 -21.095 88.369 1.00 53.09 C
ATOM 22 N2 G B2006 -2.807 -20.312 88.171 1.00 52.83 N
ATOM 23 N3 G B2006 -3.914 -22.304 87.856 1.00 53.12 N
ATOM 24 C4 G B2006 -5.072 -22.938 88.161 1.00 53.41 C
ATOM 25 P U B2007 -1.809 -27.948 89.709 1.00 48.59 P
ATOM 26 OP1 U B2007 -0.839 -29.067 89.591 1.00 48.52 O
ATOM 27 OP2 U B2007 -2.928 -28.070 90.659 1.00 48.91 O
ATOM 28 O5' U B2007 -1.026 -26.603 89.977 1.00 48.36 O
TER
Atoms:
C4: (-4.651,-22.632,91.922)
N3: (-3.751,-21.601,92.028)
OP1: (-0.839,-29.067,89.591)
OP2: (-2.928,-28.070,90.659)
C2: (-2.466,-21.526,91.533)
C1': (-0.623,-22.674,90.255)
C3': (0.514,-24.625,90.940)
O5': (-1.026,-26.603,89.977)
O4': (-0.669,-23.607,89.205)
C5': (-0.274,-25.971,88.954)
P: (-1.809,-27.948,89.709)
C4': (0.276,-24.676,89.450)
C2': (0.470,-23.139,91.225)
O2': (1.701,-22.571,90.825)
N1: (-1.973,-22.620,90.873)
O4: (-5.798,-22.580,92.411)
O2: (-1.806,-20.542,91.690)
C6: (-2.838,-23.671,90.716)
C5: (-4.092,-23.730,91.201)
O3': (1.747,-25.233,91.299)
N3: (-3.751,-21.601,92.028)
OP1: (-0.839,-29.067,89.591)
OP2: (-2.928,-28.070,90.659)
C2: (-2.466,-21.526,91.533)
C1': (-0.623,-22.674,90.255)
C3': (0.514,-24.625,90.940)
O5': (-1.026,-26.603,89.977)
O4': (-0.669,-23.607,89.205)
C5': (-0.274,-25.971,88.954)
P: (-1.809,-27.948,89.709)
C4': (0.276,-24.676,89.450)
C2': (0.470,-23.139,91.225)
O2': (1.701,-22.571,90.825)
N1: (-1.973,-22.620,90.873)
O4: (-5.798,-22.580,92.411)
O2: (-1.806,-20.542,91.690)
C6: (-2.838,-23.671,90.716)
C5: (-4.092,-23.730,91.201)
O3': (1.747,-25.233,91.299)
OP1: (-6.470,-29.909,90.115)
OP2: (-7.729,-27.813,90.857)
C3': (-3.593,-26.868,88.117)
C1': (-4.678,-25.149,86.918)
C5': (-5.555,-28.479,87.832)
O6: (-6.873,-20.548,90.151)
O4': (-5.431,-26.333,86.774)
C8: (-6.665,-24.442,88.309)
C2: (-3.861,-21.095,88.369)
C6: (-6.069,-21.166,89.449)
C5: (-6.134,-22.476,88.908)
C4: (-5.072,-22.938,88.161)
P: (-7.249,-28.698,89.768)
C4': (-4.647,-27.472,87.204)
C2': (-3.306,-25.535,87.447)
O2': (-2.472,-25.734,86.336)
N1: (-4.868,-20.554,89.117)
N2: (-2.807,-20.312,88.171)
N3: (-3.914,-22.304,87.856)
N7: (-7.129,-23.438,88.989)
N9: (-5.414,-24.216,87.798)
O5': (-6.477,-27.855,88.688)
O3': (-2.446,-27.693,88.255)
OP2: (-7.729,-27.813,90.857)
C3': (-3.593,-26.868,88.117)
C1': (-4.678,-25.149,86.918)
C5': (-5.555,-28.479,87.832)
O6: (-6.873,-20.548,90.151)
O4': (-5.431,-26.333,86.774)
C8: (-6.665,-24.442,88.309)
C2: (-3.861,-21.095,88.369)
C6: (-6.069,-21.166,89.449)
C5: (-6.134,-22.476,88.908)
C4: (-5.072,-22.938,88.161)
P: (-7.249,-28.698,89.768)
C4': (-4.647,-27.472,87.204)
C2': (-3.306,-25.535,87.447)
O2': (-2.472,-25.734,86.336)
N1: (-4.868,-20.554,89.117)
N2: (-2.807,-20.312,88.171)
N3: (-3.914,-22.304,87.856)
N7: (-7.129,-23.438,88.989)
N9: (-5.414,-24.216,87.798)
O5': (-6.477,-27.855,88.688)
O3': (-2.446,-27.693,88.255)
Image (generated by PyMOL):