Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01936:01937
Extra
PDB:
ATOM 1 O3' G A1935 106.437 128.988 128.826 1.00 46.34 O
ATOM 2 P C A1936 105.340 130.094 129.207 1.00 47.48 P
ATOM 3 OP1 C A1936 105.829 130.874 130.377 1.00 49.28 O
ATOM 4 OP2 C A1936 104.022 129.410 129.288 1.00 47.57 O
ATOM 5 O5' C A1936 105.352 131.072 127.953 1.00 45.55 O
ATOM 6 C5' C A1936 106.533 131.815 127.619 1.00 46.46 C
ATOM 7 C4' C A1936 106.276 132.688 126.419 1.00 49.16 C
ATOM 8 O4' C A1936 105.959 131.849 125.278 1.00 51.32 O
ATOM 9 C3' C A1936 105.092 133.636 126.537 1.00 49.10 C
ATOM 10 O3' C A1936 105.476 134.836 127.197 1.00 46.67 O
ATOM 11 C2' C A1936 104.729 133.878 125.076 1.00 50.87 C
ATOM 12 O2' C A1936 105.600 134.796 124.454 1.00 50.97 O
ATOM 13 C1' C A1936 104.998 132.500 124.462 1.00 52.31 C
ATOM 14 N1 C A1936 103.812 131.624 124.325 1.00 53.69 N
ATOM 15 C2 C A1936 102.926 131.843 123.258 1.00 53.72 C
ATOM 16 O2 C A1936 103.138 132.787 122.479 1.00 52.13 O
ATOM 17 N3 C A1936 101.861 131.020 123.104 1.00 54.00 N
ATOM 18 C4 C A1936 101.661 130.017 123.964 1.00 54.60 C
ATOM 19 N4 C A1936 100.606 129.218 123.764 1.00 53.32 N
ATOM 20 C5 C A1936 102.535 129.784 125.066 1.00 55.41 C
ATOM 21 C6 C A1936 103.585 130.603 125.208 1.00 54.12 C
ATOM 22 P A A1937 104.517 135.484 128.309 1.00 47.37 P
ATOM 23 OP1 A A1937 105.166 136.732 128.785 1.00 49.66 O
ATOM 24 OP2 A A1937 104.115 134.443 129.283 1.00 47.69 O
ATOM 25 O5' A A1937 103.226 135.923 127.501 1.00 50.52 O
TER
ATOM 1 O3' C B1936 105.476 134.836 127.197 1.00 46.67 O
ATOM 2 P A B1937 104.517 135.484 128.309 1.00 47.37 P
ATOM 3 OP1 A B1937 105.166 136.732 128.785 1.00 49.66 O
ATOM 4 OP2 A B1937 104.115 134.443 129.283 1.00 47.69 O
ATOM 5 O5' A B1937 103.226 135.923 127.501 1.00 50.52 O
ATOM 6 C5' A B1937 103.293 136.945 126.491 1.00 49.86 C
ATOM 7 C4' A B1937 101.981 137.016 125.762 1.00 50.00 C
ATOM 8 O4' A B1937 101.799 135.808 124.978 1.00 50.70 O
ATOM 9 C3' A B1937 100.774 137.062 126.683 1.00 48.46 C
ATOM 10 O3' A B1937 100.515 138.393 127.104 1.00 45.62 O
ATOM 11 C2' A B1937 99.675 136.487 125.804 1.00 50.05 C
ATOM 12 O2' A B1937 99.187 137.442 124.886 1.00 49.11 O
ATOM 13 C1' A B1937 100.444 135.404 125.040 1.00 52.15 C
ATOM 14 N9 A B1937 100.401 134.080 125.659 1.00 54.80 N
ATOM 15 C8 A B1937 101.300 133.542 126.544 1.00 57.05 C
ATOM 16 N7 A B1937 101.021 132.312 126.903 1.00 58.44 N
ATOM 17 C5 A B1937 99.854 132.023 126.215 1.00 58.38 C
ATOM 18 C6 A B1937 99.052 130.871 126.162 1.00 59.21 C
ATOM 19 N6 A B1937 99.323 129.750 126.829 1.00 59.99 N
ATOM 20 N1 A B1937 97.951 130.908 125.384 1.00 59.10 N
ATOM 21 C2 A B1937 97.688 132.033 124.703 1.00 59.28 C
ATOM 22 N3 A B1937 98.370 133.178 124.665 1.00 57.34 N
ATOM 23 C4 A B1937 99.455 133.106 125.452 1.00 57.37 C
ATOM 24 P U B1938 99.831 138.663 128.532 1.00 45.16 P
ATOM 25 OP1 U B1938 99.747 140.135 128.710 1.00 44.26 O
ATOM 26 OP2 U B1938 100.519 137.835 129.556 1.00 45.99 O
ATOM 27 O5' U B1938 98.354 138.095 128.369 1.00 44.70 O
TER
ATOM 2 P C A1936 105.340 130.094 129.207 1.00 47.48 P
ATOM 3 OP1 C A1936 105.829 130.874 130.377 1.00 49.28 O
ATOM 4 OP2 C A1936 104.022 129.410 129.288 1.00 47.57 O
ATOM 5 O5' C A1936 105.352 131.072 127.953 1.00 45.55 O
ATOM 6 C5' C A1936 106.533 131.815 127.619 1.00 46.46 C
ATOM 7 C4' C A1936 106.276 132.688 126.419 1.00 49.16 C
ATOM 8 O4' C A1936 105.959 131.849 125.278 1.00 51.32 O
ATOM 9 C3' C A1936 105.092 133.636 126.537 1.00 49.10 C
ATOM 10 O3' C A1936 105.476 134.836 127.197 1.00 46.67 O
ATOM 11 C2' C A1936 104.729 133.878 125.076 1.00 50.87 C
ATOM 12 O2' C A1936 105.600 134.796 124.454 1.00 50.97 O
ATOM 13 C1' C A1936 104.998 132.500 124.462 1.00 52.31 C
ATOM 14 N1 C A1936 103.812 131.624 124.325 1.00 53.69 N
ATOM 15 C2 C A1936 102.926 131.843 123.258 1.00 53.72 C
ATOM 16 O2 C A1936 103.138 132.787 122.479 1.00 52.13 O
ATOM 17 N3 C A1936 101.861 131.020 123.104 1.00 54.00 N
ATOM 18 C4 C A1936 101.661 130.017 123.964 1.00 54.60 C
ATOM 19 N4 C A1936 100.606 129.218 123.764 1.00 53.32 N
ATOM 20 C5 C A1936 102.535 129.784 125.066 1.00 55.41 C
ATOM 21 C6 C A1936 103.585 130.603 125.208 1.00 54.12 C
ATOM 22 P A A1937 104.517 135.484 128.309 1.00 47.37 P
ATOM 23 OP1 A A1937 105.166 136.732 128.785 1.00 49.66 O
ATOM 24 OP2 A A1937 104.115 134.443 129.283 1.00 47.69 O
ATOM 25 O5' A A1937 103.226 135.923 127.501 1.00 50.52 O
TER
ATOM 1 O3' C B1936 105.476 134.836 127.197 1.00 46.67 O
ATOM 2 P A B1937 104.517 135.484 128.309 1.00 47.37 P
ATOM 3 OP1 A B1937 105.166 136.732 128.785 1.00 49.66 O
ATOM 4 OP2 A B1937 104.115 134.443 129.283 1.00 47.69 O
ATOM 5 O5' A B1937 103.226 135.923 127.501 1.00 50.52 O
ATOM 6 C5' A B1937 103.293 136.945 126.491 1.00 49.86 C
ATOM 7 C4' A B1937 101.981 137.016 125.762 1.00 50.00 C
ATOM 8 O4' A B1937 101.799 135.808 124.978 1.00 50.70 O
ATOM 9 C3' A B1937 100.774 137.062 126.683 1.00 48.46 C
ATOM 10 O3' A B1937 100.515 138.393 127.104 1.00 45.62 O
ATOM 11 C2' A B1937 99.675 136.487 125.804 1.00 50.05 C
ATOM 12 O2' A B1937 99.187 137.442 124.886 1.00 49.11 O
ATOM 13 C1' A B1937 100.444 135.404 125.040 1.00 52.15 C
ATOM 14 N9 A B1937 100.401 134.080 125.659 1.00 54.80 N
ATOM 15 C8 A B1937 101.300 133.542 126.544 1.00 57.05 C
ATOM 16 N7 A B1937 101.021 132.312 126.903 1.00 58.44 N
ATOM 17 C5 A B1937 99.854 132.023 126.215 1.00 58.38 C
ATOM 18 C6 A B1937 99.052 130.871 126.162 1.00 59.21 C
ATOM 19 N6 A B1937 99.323 129.750 126.829 1.00 59.99 N
ATOM 20 N1 A B1937 97.951 130.908 125.384 1.00 59.10 N
ATOM 21 C2 A B1937 97.688 132.033 124.703 1.00 59.28 C
ATOM 22 N3 A B1937 98.370 133.178 124.665 1.00 57.34 N
ATOM 23 C4 A B1937 99.455 133.106 125.452 1.00 57.37 C
ATOM 24 P U B1938 99.831 138.663 128.532 1.00 45.16 P
ATOM 25 OP1 U B1938 99.747 140.135 128.710 1.00 44.26 O
ATOM 26 OP2 U B1938 100.519 137.835 129.556 1.00 45.99 O
ATOM 27 O5' U B1938 98.354 138.095 128.369 1.00 44.70 O
TER
Atoms:
C2: (102.926,131.843,123.258)
OP1: (105.829,130.874,130.377)
OP2: (104.022,129.410,129.288)
C4: (101.661,130.017,123.964)
O5': (105.352,131.072,127.953)
C3': (105.092,133.636,126.537)
C1': (104.998,132.500,124.462)
O4': (105.959,131.849,125.278)
C5': (106.533,131.815,127.619)
P: (105.340,130.094,129.207)
O2: (103.138,132.787,122.479)
C4': (106.276,132.688,126.419)
C2': (104.729,133.878,125.076)
O2': (105.600,134.796,124.454)
N1: (103.812,131.624,124.325)
N3: (101.861,131.020,123.104)
N4: (100.606,129.218,123.764)
C6: (103.585,130.603,125.208)
C5: (102.535,129.784,125.066)
O3': (105.476,134.836,127.197)
OP1: (105.829,130.874,130.377)
OP2: (104.022,129.410,129.288)
C4: (101.661,130.017,123.964)
O5': (105.352,131.072,127.953)
C3': (105.092,133.636,126.537)
C1': (104.998,132.500,124.462)
O4': (105.959,131.849,125.278)
C5': (106.533,131.815,127.619)
P: (105.340,130.094,129.207)
O2: (103.138,132.787,122.479)
C4': (106.276,132.688,126.419)
C2': (104.729,133.878,125.076)
O2': (105.600,134.796,124.454)
N1: (103.812,131.624,124.325)
N3: (101.861,131.020,123.104)
N4: (100.606,129.218,123.764)
C6: (103.585,130.603,125.208)
C5: (102.535,129.784,125.066)
O3': (105.476,134.836,127.197)
OP1: (105.166,136.732,128.785)
OP2: (104.115,134.443,129.283)
C3': (100.774,137.062,126.683)
C1': (100.444,135.404,125.040)
C5': (103.293,136.945,126.491)
O4': (101.799,135.808,124.978)
C8: (101.300,133.542,126.544)
O2': (99.187,137.442,124.886)
C6: (99.052,130.871,126.162)
C5: (99.854,132.023,126.215)
C4: (99.455,133.106,125.452)
P: (104.517,135.484,128.309)
C4': (101.981,137.016,125.762)
C2': (99.675,136.487,125.804)
C2: (97.688,132.033,124.703)
N1: (97.951,130.908,125.384)
N3: (98.370,133.178,124.665)
N6: (99.323,129.750,126.829)
N7: (101.021,132.312,126.903)
N9: (100.401,134.080,125.659)
O5': (103.226,135.923,127.501)
O3': (100.515,138.393,127.104)
OP2: (104.115,134.443,129.283)
C3': (100.774,137.062,126.683)
C1': (100.444,135.404,125.040)
C5': (103.293,136.945,126.491)
O4': (101.799,135.808,124.978)
C8: (101.300,133.542,126.544)
O2': (99.187,137.442,124.886)
C6: (99.052,130.871,126.162)
C5: (99.854,132.023,126.215)
C4: (99.455,133.106,125.452)
P: (104.517,135.484,128.309)
C4': (101.981,137.016,125.762)
C2': (99.675,136.487,125.804)
C2: (97.688,132.033,124.703)
N1: (97.951,130.908,125.384)
N3: (98.370,133.178,124.665)
N6: (99.323,129.750,126.829)
N7: (101.021,132.312,126.903)
N9: (100.401,134.080,125.659)
O5': (103.226,135.923,127.501)
O3': (100.515,138.393,127.104)
Image (generated by PyMOL):