Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0242:0243
Extra
PDB:
ATOM 1 O3' U A 241 79.462 143.376 -0.157 1.00 82.89 O
ATOM 2 P C A 242 77.921 143.216 -0.594 1.00 85.36 P
ATOM 3 OP1 C A 242 77.328 144.572 -0.714 1.00 85.56 O
ATOM 4 OP2 C A 242 77.300 142.223 0.322 1.00 85.11 O
ATOM 5 O5' C A 242 78.013 142.564 -2.046 1.00 85.86 O
ATOM 6 C5' C A 242 76.860 141.983 -2.679 1.00 87.85 C
ATOM 7 C4' C A 242 76.795 142.408 -4.127 1.00 90.22 C
ATOM 8 O4' C A 242 76.640 143.852 -4.189 1.00 91.07 O
ATOM 9 C3' C A 242 78.043 142.131 -4.951 1.00 90.93 C
ATOM 10 O3' C A 242 78.063 140.799 -5.456 1.00 91.76 O
ATOM 11 C2' C A 242 77.938 143.167 -6.064 1.00 90.91 C
ATOM 12 O2' C A 242 77.057 142.785 -7.102 1.00 90.09 O
ATOM 13 C1' C A 242 77.347 144.364 -5.311 1.00 91.44 C
ATOM 14 N1 C A 242 78.348 145.351 -4.838 1.00 92.27 N
ATOM 15 C2 C A 242 79.210 145.954 -5.777 1.00 92.81 C
ATOM 16 O2 C A 242 79.104 145.651 -6.979 1.00 93.45 O
ATOM 17 N3 C A 242 80.133 146.851 -5.348 1.00 92.72 N
ATOM 18 C4 C A 242 80.215 147.157 -4.050 1.00 92.56 C
ATOM 19 N4 C A 242 81.147 148.039 -3.674 1.00 91.01 N
ATOM 20 C5 C A 242 79.348 146.570 -3.079 1.00 92.57 C
ATOM 21 C6 C A 242 78.441 145.681 -3.512 1.00 92.20 C
ATOM 22 P A A 243 79.469 140.046 -5.663 1.00 93.15 P
ATOM 23 OP1 A A 243 79.205 138.798 -6.435 1.00 91.71 O
ATOM 24 OP2 A A 243 80.126 139.960 -4.334 1.00 93.52 O
ATOM 25 O5' A A 243 80.325 141.040 -6.577 1.00 93.66 O
TER
ATOM 1 O3' C B 242 78.063 140.799 -5.456 1.00 91.76 O
ATOM 2 P A B 243 79.469 140.046 -5.663 1.00 93.15 P
ATOM 3 OP1 A B 243 79.205 138.798 -6.435 1.00 91.71 O
ATOM 4 OP2 A B 243 80.126 139.960 -4.334 1.00 93.52 O
ATOM 5 O5' A B 243 80.325 141.040 -6.577 1.00 93.66 O
ATOM 6 C5' A B 243 80.020 141.224 -7.985 1.00 93.39 C
ATOM 7 C4' A B 243 80.931 142.270 -8.598 1.00 92.51 C
ATOM 8 O4' A B 243 80.743 143.536 -7.913 1.00 92.38 O
ATOM 9 C3' A B 243 82.427 142.006 -8.500 1.00 92.76 C
ATOM 10 O3' A B 243 82.869 141.175 -9.569 1.00 93.63 O
ATOM 11 C2' A B 243 83.019 143.406 -8.605 1.00 92.37 C
ATOM 12 O2' A B 243 83.100 143.857 -9.941 1.00 92.75 O
ATOM 13 C1' A B 243 81.976 144.237 -7.853 1.00 92.08 C
ATOM 14 N9 A B 243 82.301 144.487 -6.447 1.00 92.03 N
ATOM 15 C8 A B 243 81.846 143.812 -5.340 1.00 92.32 C
ATOM 16 N7 A B 243 82.304 144.283 -4.207 1.00 92.05 N
ATOM 17 C5 A B 243 83.119 145.337 -4.589 1.00 91.74 C
ATOM 18 C6 A B 243 83.900 146.242 -3.852 1.00 91.90 C
ATOM 19 N6 A B 243 83.990 146.231 -2.521 1.00 91.54 N
ATOM 20 N1 A B 243 84.597 147.172 -4.537 1.00 91.99 N
ATOM 21 C2 A B 243 84.511 147.180 -5.872 1.00 92.29 C
ATOM 22 N3 A B 243 83.816 146.381 -6.678 1.00 92.58 N
ATOM 23 C4 A B 243 83.132 145.471 -5.966 1.00 92.34 C
ATOM 24 P C B 244 84.287 140.424 -9.468 1.00 95.15 P
ATOM 25 OP1 C B 244 84.553 139.791 -10.791 1.00 95.28 O
ATOM 26 OP2 C B 244 84.282 139.582 -8.242 1.00 96.61 O
ATOM 27 O5' C B 244 85.344 141.597 -9.248 1.00 94.52 O
TER
ATOM 2 P C A 242 77.921 143.216 -0.594 1.00 85.36 P
ATOM 3 OP1 C A 242 77.328 144.572 -0.714 1.00 85.56 O
ATOM 4 OP2 C A 242 77.300 142.223 0.322 1.00 85.11 O
ATOM 5 O5' C A 242 78.013 142.564 -2.046 1.00 85.86 O
ATOM 6 C5' C A 242 76.860 141.983 -2.679 1.00 87.85 C
ATOM 7 C4' C A 242 76.795 142.408 -4.127 1.00 90.22 C
ATOM 8 O4' C A 242 76.640 143.852 -4.189 1.00 91.07 O
ATOM 9 C3' C A 242 78.043 142.131 -4.951 1.00 90.93 C
ATOM 10 O3' C A 242 78.063 140.799 -5.456 1.00 91.76 O
ATOM 11 C2' C A 242 77.938 143.167 -6.064 1.00 90.91 C
ATOM 12 O2' C A 242 77.057 142.785 -7.102 1.00 90.09 O
ATOM 13 C1' C A 242 77.347 144.364 -5.311 1.00 91.44 C
ATOM 14 N1 C A 242 78.348 145.351 -4.838 1.00 92.27 N
ATOM 15 C2 C A 242 79.210 145.954 -5.777 1.00 92.81 C
ATOM 16 O2 C A 242 79.104 145.651 -6.979 1.00 93.45 O
ATOM 17 N3 C A 242 80.133 146.851 -5.348 1.00 92.72 N
ATOM 18 C4 C A 242 80.215 147.157 -4.050 1.00 92.56 C
ATOM 19 N4 C A 242 81.147 148.039 -3.674 1.00 91.01 N
ATOM 20 C5 C A 242 79.348 146.570 -3.079 1.00 92.57 C
ATOM 21 C6 C A 242 78.441 145.681 -3.512 1.00 92.20 C
ATOM 22 P A A 243 79.469 140.046 -5.663 1.00 93.15 P
ATOM 23 OP1 A A 243 79.205 138.798 -6.435 1.00 91.71 O
ATOM 24 OP2 A A 243 80.126 139.960 -4.334 1.00 93.52 O
ATOM 25 O5' A A 243 80.325 141.040 -6.577 1.00 93.66 O
TER
ATOM 1 O3' C B 242 78.063 140.799 -5.456 1.00 91.76 O
ATOM 2 P A B 243 79.469 140.046 -5.663 1.00 93.15 P
ATOM 3 OP1 A B 243 79.205 138.798 -6.435 1.00 91.71 O
ATOM 4 OP2 A B 243 80.126 139.960 -4.334 1.00 93.52 O
ATOM 5 O5' A B 243 80.325 141.040 -6.577 1.00 93.66 O
ATOM 6 C5' A B 243 80.020 141.224 -7.985 1.00 93.39 C
ATOM 7 C4' A B 243 80.931 142.270 -8.598 1.00 92.51 C
ATOM 8 O4' A B 243 80.743 143.536 -7.913 1.00 92.38 O
ATOM 9 C3' A B 243 82.427 142.006 -8.500 1.00 92.76 C
ATOM 10 O3' A B 243 82.869 141.175 -9.569 1.00 93.63 O
ATOM 11 C2' A B 243 83.019 143.406 -8.605 1.00 92.37 C
ATOM 12 O2' A B 243 83.100 143.857 -9.941 1.00 92.75 O
ATOM 13 C1' A B 243 81.976 144.237 -7.853 1.00 92.08 C
ATOM 14 N9 A B 243 82.301 144.487 -6.447 1.00 92.03 N
ATOM 15 C8 A B 243 81.846 143.812 -5.340 1.00 92.32 C
ATOM 16 N7 A B 243 82.304 144.283 -4.207 1.00 92.05 N
ATOM 17 C5 A B 243 83.119 145.337 -4.589 1.00 91.74 C
ATOM 18 C6 A B 243 83.900 146.242 -3.852 1.00 91.90 C
ATOM 19 N6 A B 243 83.990 146.231 -2.521 1.00 91.54 N
ATOM 20 N1 A B 243 84.597 147.172 -4.537 1.00 91.99 N
ATOM 21 C2 A B 243 84.511 147.180 -5.872 1.00 92.29 C
ATOM 22 N3 A B 243 83.816 146.381 -6.678 1.00 92.58 N
ATOM 23 C4 A B 243 83.132 145.471 -5.966 1.00 92.34 C
ATOM 24 P C B 244 84.287 140.424 -9.468 1.00 95.15 P
ATOM 25 OP1 C B 244 84.553 139.791 -10.791 1.00 95.28 O
ATOM 26 OP2 C B 244 84.282 139.582 -8.242 1.00 96.61 O
ATOM 27 O5' C B 244 85.344 141.597 -9.248 1.00 94.52 O
TER
Atoms:
C2: (79.210,145.954,-5.777)
OP1: (77.328,144.572,-0.714)
OP2: (77.300,142.223,0.322)
C4: (80.215,147.157,-4.050)
O5': (78.013,142.564,-2.046)
C3': (78.043,142.131,-4.951)
C1': (77.347,144.364,-5.311)
O4': (76.640,143.852,-4.189)
C5': (76.860,141.983,-2.679)
P: (77.921,143.216,-0.594)
O2: (79.104,145.651,-6.979)
C4': (76.795,142.408,-4.127)
C2': (77.938,143.167,-6.064)
O2': (77.057,142.785,-7.102)
N1: (78.348,145.351,-4.838)
N3: (80.133,146.851,-5.348)
N4: (81.147,148.039,-3.674)
C6: (78.441,145.681,-3.512)
C5: (79.348,146.570,-3.079)
O3': (78.063,140.799,-5.456)
OP1: (77.328,144.572,-0.714)
OP2: (77.300,142.223,0.322)
C4: (80.215,147.157,-4.050)
O5': (78.013,142.564,-2.046)
C3': (78.043,142.131,-4.951)
C1': (77.347,144.364,-5.311)
O4': (76.640,143.852,-4.189)
C5': (76.860,141.983,-2.679)
P: (77.921,143.216,-0.594)
O2: (79.104,145.651,-6.979)
C4': (76.795,142.408,-4.127)
C2': (77.938,143.167,-6.064)
O2': (77.057,142.785,-7.102)
N1: (78.348,145.351,-4.838)
N3: (80.133,146.851,-5.348)
N4: (81.147,148.039,-3.674)
C6: (78.441,145.681,-3.512)
C5: (79.348,146.570,-3.079)
O3': (78.063,140.799,-5.456)
OP1: (79.205,138.798,-6.435)
OP2: (80.126,139.960,-4.334)
C3': (82.427,142.006,-8.500)
C1': (81.976,144.237,-7.853)
C5': (80.020,141.224,-7.985)
O4': (80.743,143.536,-7.913)
C8: (81.846,143.812,-5.340)
O2': (83.100,143.857,-9.941)
C6: (83.900,146.242,-3.852)
C5: (83.119,145.337,-4.589)
C4: (83.132,145.471,-5.966)
P: (79.469,140.046,-5.663)
C4': (80.931,142.270,-8.598)
C2': (83.019,143.406,-8.605)
C2: (84.511,147.180,-5.872)
N1: (84.597,147.172,-4.537)
N3: (83.816,146.381,-6.678)
N6: (83.990,146.231,-2.521)
N7: (82.304,144.283,-4.207)
N9: (82.301,144.487,-6.447)
O5': (80.325,141.040,-6.577)
O3': (82.869,141.175,-9.569)
OP2: (80.126,139.960,-4.334)
C3': (82.427,142.006,-8.500)
C1': (81.976,144.237,-7.853)
C5': (80.020,141.224,-7.985)
O4': (80.743,143.536,-7.913)
C8: (81.846,143.812,-5.340)
O2': (83.100,143.857,-9.941)
C6: (83.900,146.242,-3.852)
C5: (83.119,145.337,-4.589)
C4: (83.132,145.471,-5.966)
P: (79.469,140.046,-5.663)
C4': (80.931,142.270,-8.598)
C2': (83.019,143.406,-8.605)
C2: (84.511,147.180,-5.872)
N1: (84.597,147.172,-4.537)
N3: (83.816,146.381,-6.678)
N6: (83.990,146.231,-2.521)
N7: (82.304,144.283,-4.207)
N9: (82.301,144.487,-6.447)
O5': (80.325,141.040,-6.577)
O3': (82.869,141.175,-9.569)
Image (generated by PyMOL):