Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11157:11156
Extra
PDB:
ATOM 1 O3' A A1156 36.515 -5.876 -5.419 1.00 57.55 O
ATOM 2 P G A1157 35.832 -6.521 -6.701 1.00 53.49 P
ATOM 3 OP1 G A1157 36.904 -6.794 -7.676 1.00 53.86 O
ATOM 4 OP2 G A1157 34.711 -5.638 -7.099 1.00 53.77 O
ATOM 5 O5' G A1157 35.282 -7.880 -6.119 1.00 53.29 O
ATOM 6 C5' G A1157 33.991 -7.912 -5.625 1.00 53.18 C
ATOM 7 C4' G A1157 33.720 -9.091 -4.779 1.00 52.85 C
ATOM 8 O4' G A1157 33.256 -8.590 -3.525 1.00 52.32 O
ATOM 9 C3' G A1157 32.585 -9.955 -5.306 1.00 53.22 C
ATOM 10 O3' G A1157 33.025 -11.117 -5.974 1.00 53.52 O
ATOM 11 C2' G A1157 31.665 -10.203 -4.116 1.00 52.78 C
ATOM 12 O2' G A1157 32.057 -11.349 -3.379 1.00 52.45 O
ATOM 13 C1' G A1157 31.938 -8.983 -3.281 1.00 52.35 C
ATOM 14 N9 G A1157 31.073 -7.880 -3.653 1.00 52.58 N
ATOM 15 C8 G A1157 31.386 -6.714 -4.286 1.00 52.82 C
ATOM 16 N7 G A1157 30.344 -5.946 -4.474 1.00 53.01 N
ATOM 17 C5 G A1157 29.292 -6.654 -3.886 1.00 52.87 C
ATOM 18 C6 G A1157 27.917 -6.351 -3.735 1.00 52.96 C
ATOM 19 O6 G A1157 27.317 -5.347 -4.108 1.00 53.20 O
ATOM 20 N1 G A1157 27.240 -7.369 -3.080 1.00 52.75 N
ATOM 21 C2 G A1157 27.797 -8.532 -2.615 1.00 52.50 C
ATOM 22 N2 G A1157 26.989 -9.411 -2.008 1.00 52.34 N
ATOM 23 N3 G A1157 29.079 -8.831 -2.722 1.00 52.40 N
ATOM 24 C4 G A1157 29.747 -7.856 -3.374 1.00 52.60 C
ATOM 25 P U A1158 32.140 -11.693 -7.164 1.00 54.19 P
ATOM 26 OP1 U A1158 32.852 -12.847 -7.756 1.00 54.45 O
ATOM 27 OP2 U A1158 31.804 -10.546 -8.031 1.00 54.59 O
ATOM 28 O5' U A1158 30.851 -12.183 -6.383 1.00 53.98 O
TER
ATOM 1 O3' U B1155 36.509 0.083 -3.457 1.00 57.37 O
ATOM 2 P A B1156 36.147 -0.282 -4.985 1.00 57.46 P
ATOM 3 OP1 A B1156 37.393 -0.077 -5.789 1.00 57.73 O
ATOM 4 OP2 A B1156 34.930 0.476 -5.346 1.00 57.76 O
ATOM 5 O5' A B1156 35.805 -1.833 -4.920 1.00 57.42 O
ATOM 6 C5' A B1156 36.839 -2.776 -5.017 1.00 57.36 C
ATOM 7 C4' A B1156 36.651 -3.902 -4.063 1.00 56.94 C
ATOM 8 O4' A B1156 35.980 -3.451 -2.875 1.00 56.48 O
ATOM 9 C3' A B1156 35.796 -5.038 -4.558 1.00 57.22 C
ATOM 10 O3' A B1156 36.515 -5.876 -5.419 1.00 57.55 O
ATOM 11 C2' A B1156 35.391 -5.711 -3.265 1.00 56.68 C
ATOM 12 O2' A B1156 36.460 -6.480 -2.757 1.00 56.38 O
ATOM 13 C1' A B1156 35.198 -4.504 -2.354 1.00 56.31 C
ATOM 14 N9 A B1156 33.789 -4.065 -2.309 1.00 56.42 N
ATOM 15 C8 A B1156 33.291 -2.883 -2.765 1.00 56.68 C
ATOM 16 N7 A B1156 32.012 -2.750 -2.567 1.00 56.72 N
ATOM 17 C5 A B1156 31.635 -3.917 -1.941 1.00 56.47 C
ATOM 18 C6 A B1156 30.390 -4.373 -1.477 1.00 56.39 C
ATOM 19 N6 A B1156 29.269 -3.670 -1.593 1.00 56.57 N
ATOM 20 N1 A B1156 30.337 -5.592 -0.894 1.00 56.14 N
ATOM 21 C2 A B1156 31.484 -6.284 -0.780 1.00 55.97 C
ATOM 22 N3 A B1156 32.711 -5.955 -1.169 1.00 56.02 N
ATOM 23 C4 A B1156 32.719 -4.745 -1.768 1.00 56.28 C
ATOM 24 P G B1157 35.832 -6.521 -6.701 1.00 53.49 P
ATOM 25 OP1 G B1157 36.904 -6.794 -7.676 1.00 53.86 O
ATOM 26 OP2 G B1157 34.711 -5.638 -7.099 1.00 53.77 O
ATOM 27 O5' G B1157 35.282 -7.880 -6.119 1.00 53.29 O
TER
ATOM 2 P G A1157 35.832 -6.521 -6.701 1.00 53.49 P
ATOM 3 OP1 G A1157 36.904 -6.794 -7.676 1.00 53.86 O
ATOM 4 OP2 G A1157 34.711 -5.638 -7.099 1.00 53.77 O
ATOM 5 O5' G A1157 35.282 -7.880 -6.119 1.00 53.29 O
ATOM 6 C5' G A1157 33.991 -7.912 -5.625 1.00 53.18 C
ATOM 7 C4' G A1157 33.720 -9.091 -4.779 1.00 52.85 C
ATOM 8 O4' G A1157 33.256 -8.590 -3.525 1.00 52.32 O
ATOM 9 C3' G A1157 32.585 -9.955 -5.306 1.00 53.22 C
ATOM 10 O3' G A1157 33.025 -11.117 -5.974 1.00 53.52 O
ATOM 11 C2' G A1157 31.665 -10.203 -4.116 1.00 52.78 C
ATOM 12 O2' G A1157 32.057 -11.349 -3.379 1.00 52.45 O
ATOM 13 C1' G A1157 31.938 -8.983 -3.281 1.00 52.35 C
ATOM 14 N9 G A1157 31.073 -7.880 -3.653 1.00 52.58 N
ATOM 15 C8 G A1157 31.386 -6.714 -4.286 1.00 52.82 C
ATOM 16 N7 G A1157 30.344 -5.946 -4.474 1.00 53.01 N
ATOM 17 C5 G A1157 29.292 -6.654 -3.886 1.00 52.87 C
ATOM 18 C6 G A1157 27.917 -6.351 -3.735 1.00 52.96 C
ATOM 19 O6 G A1157 27.317 -5.347 -4.108 1.00 53.20 O
ATOM 20 N1 G A1157 27.240 -7.369 -3.080 1.00 52.75 N
ATOM 21 C2 G A1157 27.797 -8.532 -2.615 1.00 52.50 C
ATOM 22 N2 G A1157 26.989 -9.411 -2.008 1.00 52.34 N
ATOM 23 N3 G A1157 29.079 -8.831 -2.722 1.00 52.40 N
ATOM 24 C4 G A1157 29.747 -7.856 -3.374 1.00 52.60 C
ATOM 25 P U A1158 32.140 -11.693 -7.164 1.00 54.19 P
ATOM 26 OP1 U A1158 32.852 -12.847 -7.756 1.00 54.45 O
ATOM 27 OP2 U A1158 31.804 -10.546 -8.031 1.00 54.59 O
ATOM 28 O5' U A1158 30.851 -12.183 -6.383 1.00 53.98 O
TER
ATOM 1 O3' U B1155 36.509 0.083 -3.457 1.00 57.37 O
ATOM 2 P A B1156 36.147 -0.282 -4.985 1.00 57.46 P
ATOM 3 OP1 A B1156 37.393 -0.077 -5.789 1.00 57.73 O
ATOM 4 OP2 A B1156 34.930 0.476 -5.346 1.00 57.76 O
ATOM 5 O5' A B1156 35.805 -1.833 -4.920 1.00 57.42 O
ATOM 6 C5' A B1156 36.839 -2.776 -5.017 1.00 57.36 C
ATOM 7 C4' A B1156 36.651 -3.902 -4.063 1.00 56.94 C
ATOM 8 O4' A B1156 35.980 -3.451 -2.875 1.00 56.48 O
ATOM 9 C3' A B1156 35.796 -5.038 -4.558 1.00 57.22 C
ATOM 10 O3' A B1156 36.515 -5.876 -5.419 1.00 57.55 O
ATOM 11 C2' A B1156 35.391 -5.711 -3.265 1.00 56.68 C
ATOM 12 O2' A B1156 36.460 -6.480 -2.757 1.00 56.38 O
ATOM 13 C1' A B1156 35.198 -4.504 -2.354 1.00 56.31 C
ATOM 14 N9 A B1156 33.789 -4.065 -2.309 1.00 56.42 N
ATOM 15 C8 A B1156 33.291 -2.883 -2.765 1.00 56.68 C
ATOM 16 N7 A B1156 32.012 -2.750 -2.567 1.00 56.72 N
ATOM 17 C5 A B1156 31.635 -3.917 -1.941 1.00 56.47 C
ATOM 18 C6 A B1156 30.390 -4.373 -1.477 1.00 56.39 C
ATOM 19 N6 A B1156 29.269 -3.670 -1.593 1.00 56.57 N
ATOM 20 N1 A B1156 30.337 -5.592 -0.894 1.00 56.14 N
ATOM 21 C2 A B1156 31.484 -6.284 -0.780 1.00 55.97 C
ATOM 22 N3 A B1156 32.711 -5.955 -1.169 1.00 56.02 N
ATOM 23 C4 A B1156 32.719 -4.745 -1.768 1.00 56.28 C
ATOM 24 P G B1157 35.832 -6.521 -6.701 1.00 53.49 P
ATOM 25 OP1 G B1157 36.904 -6.794 -7.676 1.00 53.86 O
ATOM 26 OP2 G B1157 34.711 -5.638 -7.099 1.00 53.77 O
ATOM 27 O5' G B1157 35.282 -7.880 -6.119 1.00 53.29 O
TER
Atoms:
OP1: (36.904,-6.794,-7.676)
OP2: (34.711,-5.638,-7.099)
C3': (32.585,-9.955,-5.306)
C1': (31.938,-8.983,-3.281)
C5': (33.991,-7.912,-5.625)
O6: (27.317,-5.347,-4.108)
O4': (33.256,-8.590,-3.525)
C8: (31.386,-6.714,-4.286)
C2: (27.797,-8.532,-2.615)
C6: (27.917,-6.351,-3.735)
C5: (29.292,-6.654,-3.886)
C4: (29.747,-7.856,-3.374)
P: (35.832,-6.521,-6.701)
C4': (33.720,-9.091,-4.779)
C2': (31.665,-10.203,-4.116)
O2': (32.057,-11.349,-3.379)
N1: (27.240,-7.369,-3.080)
N2: (26.989,-9.411,-2.008)
N3: (29.079,-8.831,-2.722)
N7: (30.344,-5.946,-4.474)
N9: (31.073,-7.880,-3.653)
O5': (35.282,-7.880,-6.119)
O3': (33.025,-11.117,-5.974)
OP2: (34.711,-5.638,-7.099)
C3': (32.585,-9.955,-5.306)
C1': (31.938,-8.983,-3.281)
C5': (33.991,-7.912,-5.625)
O6: (27.317,-5.347,-4.108)
O4': (33.256,-8.590,-3.525)
C8: (31.386,-6.714,-4.286)
C2: (27.797,-8.532,-2.615)
C6: (27.917,-6.351,-3.735)
C5: (29.292,-6.654,-3.886)
C4: (29.747,-7.856,-3.374)
P: (35.832,-6.521,-6.701)
C4': (33.720,-9.091,-4.779)
C2': (31.665,-10.203,-4.116)
O2': (32.057,-11.349,-3.379)
N1: (27.240,-7.369,-3.080)
N2: (26.989,-9.411,-2.008)
N3: (29.079,-8.831,-2.722)
N7: (30.344,-5.946,-4.474)
N9: (31.073,-7.880,-3.653)
O5': (35.282,-7.880,-6.119)
O3': (33.025,-11.117,-5.974)
OP1: (37.393,-0.077,-5.789)
OP2: (34.930,0.476,-5.346)
C3': (35.796,-5.038,-4.558)
C1': (35.198,-4.504,-2.354)
C5': (36.839,-2.776,-5.017)
O4': (35.980,-3.451,-2.875)
C8: (33.291,-2.883,-2.765)
O2': (36.460,-6.480,-2.757)
C6: (30.390,-4.373,-1.477)
C5: (31.635,-3.917,-1.941)
C4: (32.719,-4.745,-1.768)
P: (36.147,-0.282,-4.985)
C4': (36.651,-3.902,-4.063)
C2': (35.391,-5.711,-3.265)
C2: (31.484,-6.284,-0.780)
N1: (30.337,-5.592,-0.894)
N3: (32.711,-5.955,-1.169)
N6: (29.269,-3.670,-1.593)
N7: (32.012,-2.750,-2.567)
N9: (33.789,-4.065,-2.309)
O5': (35.805,-1.833,-4.920)
O3': (36.515,-5.876,-5.419)
OP2: (34.930,0.476,-5.346)
C3': (35.796,-5.038,-4.558)
C1': (35.198,-4.504,-2.354)
C5': (36.839,-2.776,-5.017)
O4': (35.980,-3.451,-2.875)
C8: (33.291,-2.883,-2.765)
O2': (36.460,-6.480,-2.757)
C6: (30.390,-4.373,-1.477)
C5: (31.635,-3.917,-1.941)
C4: (32.719,-4.745,-1.768)
P: (36.147,-0.282,-4.985)
C4': (36.651,-3.902,-4.063)
C2': (35.391,-5.711,-3.265)
C2: (31.484,-6.284,-0.780)
N1: (30.337,-5.592,-0.894)
N3: (32.711,-5.955,-1.169)
N6: (29.269,-3.670,-1.593)
N7: (32.012,-2.750,-2.567)
N9: (33.789,-4.065,-2.309)
O5': (35.805,-1.833,-4.920)
O3': (36.515,-5.876,-5.419)
Image (generated by PyMOL):