Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1107:A1108
Extra
PDB:
ATOM 1 O3' G A1106 -120.961 55.029 -11.889 1.00 30.84 O
ATOM 2 P C A1107 -122.077 55.904 -11.127 1.00 24.43 P
ATOM 3 OP1 C A1107 -122.998 54.949 -10.442 1.00 24.43 O
ATOM 4 OP2 C A1107 -122.638 56.841 -12.119 1.00 24.43 O
ATOM 5 O5' C A1107 -121.228 56.703 -10.046 1.00 24.43 O
ATOM 6 C5' C A1107 -120.436 56.009 -9.104 1.00 24.43 C
ATOM 7 C4' C A1107 -119.807 56.947 -8.112 1.00 24.43 C
ATOM 8 O4' C A1107 -118.752 57.707 -8.751 1.00 24.43 O
ATOM 9 C3' C A1107 -120.719 58.011 -7.532 1.00 24.43 C
ATOM 10 O3' C A1107 -121.560 57.525 -6.499 1.00 24.43 O
ATOM 11 C2' C A1107 -119.730 59.068 -7.069 1.00 24.43 C
ATOM 12 O2' C A1107 -119.126 58.681 -5.846 1.00 24.43 O
ATOM 13 C1' C A1107 -118.677 58.995 -8.172 1.00 24.43 C
ATOM 14 N1 C A1107 -118.878 60.016 -9.241 1.00 24.10 N
ATOM 15 C2 C A1107 -118.781 61.408 -8.970 1.00 24.10 C
ATOM 16 O2 C A1107 -118.591 61.833 -7.812 1.00 24.10 O
ATOM 17 N3 C A1107 -118.924 62.280 -10.005 1.00 24.10 N
ATOM 18 C4 C A1107 -119.132 61.818 -11.246 1.00 24.10 C
ATOM 19 N4 C A1107 -119.273 62.691 -12.239 1.00 24.10 N
ATOM 20 C5 C A1107 -119.210 60.430 -11.542 1.00 24.10 C
ATOM 21 C6 C A1107 -119.074 59.574 -10.528 1.00 24.10 C
ATOM 22 P A A1108 -123.144 57.733 -6.613 1.00 29.14 P
ATOM 23 OP1 A A1108 -123.771 56.952 -5.519 1.00 29.14 O
ATOM 24 OP2 A A1108 -123.511 57.431 -8.019 1.00 29.14 O
ATOM 25 O5' A A1108 -123.316 59.292 -6.336 1.00 29.14 O
TER
ATOM 1 O3' C B1107 -121.560 57.525 -6.499 1.00 24.43 O
ATOM 2 P A B1108 -123.144 57.733 -6.613 1.00 29.14 P
ATOM 3 OP1 A B1108 -123.771 56.952 -5.519 1.00 29.14 O
ATOM 4 OP2 A B1108 -123.511 57.431 -8.019 1.00 29.14 O
ATOM 5 O5' A B1108 -123.316 59.292 -6.336 1.00 29.14 O
ATOM 6 C5' A B1108 -122.772 59.908 -5.174 1.00 29.14 C
ATOM 7 C4' A B1108 -122.666 61.398 -5.358 1.00 29.14 C
ATOM 8 O4' A B1108 -121.735 61.691 -6.436 1.00 29.14 O
ATOM 9 C3' A B1108 -123.944 62.102 -5.783 1.00 29.14 C
ATOM 10 O3' A B1108 -124.815 62.367 -4.700 1.00 29.14 O
ATOM 11 C2' A B1108 -123.427 63.357 -6.492 1.00 29.14 C
ATOM 12 O2' A B1108 -123.070 64.374 -5.560 1.00 29.14 O
ATOM 13 C1' A B1108 -122.154 62.836 -7.146 1.00 29.14 C
ATOM 14 N9 A B1108 -122.358 62.466 -8.549 1.00 29.63 N
ATOM 15 C8 A B1108 -122.586 61.233 -9.106 1.00 29.63 C
ATOM 16 N7 A B1108 -122.689 61.267 -10.419 1.00 29.63 N
ATOM 17 C5 A B1108 -122.510 62.615 -10.745 1.00 29.63 C
ATOM 18 C6 A B1108 -122.496 63.342 -11.965 1.00 29.63 C
ATOM 19 N6 A B1108 -122.675 62.827 -13.195 1.00 29.63 N
ATOM 20 N1 A B1108 -122.283 64.678 -11.887 1.00 29.63 N
ATOM 21 C2 A B1108 -122.096 65.249 -10.690 1.00 29.63 C
ATOM 22 N3 A B1108 -122.075 64.680 -9.488 1.00 29.63 N
ATOM 23 C4 A B1108 -122.293 63.353 -9.588 1.00 29.63 C
ATOM 24 P A B1109 -126.404 62.247 -4.908 1.00 33.77 P
ATOM 25 OP1 A B1109 -127.032 62.379 -3.573 1.00 33.77 O
ATOM 26 OP2 A B1109 -126.650 61.006 -5.694 1.00 33.77 O
ATOM 27 O5' A B1109 -126.748 63.522 -5.805 1.00 33.77 O
TER
ATOM 2 P C A1107 -122.077 55.904 -11.127 1.00 24.43 P
ATOM 3 OP1 C A1107 -122.998 54.949 -10.442 1.00 24.43 O
ATOM 4 OP2 C A1107 -122.638 56.841 -12.119 1.00 24.43 O
ATOM 5 O5' C A1107 -121.228 56.703 -10.046 1.00 24.43 O
ATOM 6 C5' C A1107 -120.436 56.009 -9.104 1.00 24.43 C
ATOM 7 C4' C A1107 -119.807 56.947 -8.112 1.00 24.43 C
ATOM 8 O4' C A1107 -118.752 57.707 -8.751 1.00 24.43 O
ATOM 9 C3' C A1107 -120.719 58.011 -7.532 1.00 24.43 C
ATOM 10 O3' C A1107 -121.560 57.525 -6.499 1.00 24.43 O
ATOM 11 C2' C A1107 -119.730 59.068 -7.069 1.00 24.43 C
ATOM 12 O2' C A1107 -119.126 58.681 -5.846 1.00 24.43 O
ATOM 13 C1' C A1107 -118.677 58.995 -8.172 1.00 24.43 C
ATOM 14 N1 C A1107 -118.878 60.016 -9.241 1.00 24.10 N
ATOM 15 C2 C A1107 -118.781 61.408 -8.970 1.00 24.10 C
ATOM 16 O2 C A1107 -118.591 61.833 -7.812 1.00 24.10 O
ATOM 17 N3 C A1107 -118.924 62.280 -10.005 1.00 24.10 N
ATOM 18 C4 C A1107 -119.132 61.818 -11.246 1.00 24.10 C
ATOM 19 N4 C A1107 -119.273 62.691 -12.239 1.00 24.10 N
ATOM 20 C5 C A1107 -119.210 60.430 -11.542 1.00 24.10 C
ATOM 21 C6 C A1107 -119.074 59.574 -10.528 1.00 24.10 C
ATOM 22 P A A1108 -123.144 57.733 -6.613 1.00 29.14 P
ATOM 23 OP1 A A1108 -123.771 56.952 -5.519 1.00 29.14 O
ATOM 24 OP2 A A1108 -123.511 57.431 -8.019 1.00 29.14 O
ATOM 25 O5' A A1108 -123.316 59.292 -6.336 1.00 29.14 O
TER
ATOM 1 O3' C B1107 -121.560 57.525 -6.499 1.00 24.43 O
ATOM 2 P A B1108 -123.144 57.733 -6.613 1.00 29.14 P
ATOM 3 OP1 A B1108 -123.771 56.952 -5.519 1.00 29.14 O
ATOM 4 OP2 A B1108 -123.511 57.431 -8.019 1.00 29.14 O
ATOM 5 O5' A B1108 -123.316 59.292 -6.336 1.00 29.14 O
ATOM 6 C5' A B1108 -122.772 59.908 -5.174 1.00 29.14 C
ATOM 7 C4' A B1108 -122.666 61.398 -5.358 1.00 29.14 C
ATOM 8 O4' A B1108 -121.735 61.691 -6.436 1.00 29.14 O
ATOM 9 C3' A B1108 -123.944 62.102 -5.783 1.00 29.14 C
ATOM 10 O3' A B1108 -124.815 62.367 -4.700 1.00 29.14 O
ATOM 11 C2' A B1108 -123.427 63.357 -6.492 1.00 29.14 C
ATOM 12 O2' A B1108 -123.070 64.374 -5.560 1.00 29.14 O
ATOM 13 C1' A B1108 -122.154 62.836 -7.146 1.00 29.14 C
ATOM 14 N9 A B1108 -122.358 62.466 -8.549 1.00 29.63 N
ATOM 15 C8 A B1108 -122.586 61.233 -9.106 1.00 29.63 C
ATOM 16 N7 A B1108 -122.689 61.267 -10.419 1.00 29.63 N
ATOM 17 C5 A B1108 -122.510 62.615 -10.745 1.00 29.63 C
ATOM 18 C6 A B1108 -122.496 63.342 -11.965 1.00 29.63 C
ATOM 19 N6 A B1108 -122.675 62.827 -13.195 1.00 29.63 N
ATOM 20 N1 A B1108 -122.283 64.678 -11.887 1.00 29.63 N
ATOM 21 C2 A B1108 -122.096 65.249 -10.690 1.00 29.63 C
ATOM 22 N3 A B1108 -122.075 64.680 -9.488 1.00 29.63 N
ATOM 23 C4 A B1108 -122.293 63.353 -9.588 1.00 29.63 C
ATOM 24 P A B1109 -126.404 62.247 -4.908 1.00 33.77 P
ATOM 25 OP1 A B1109 -127.032 62.379 -3.573 1.00 33.77 O
ATOM 26 OP2 A B1109 -126.650 61.006 -5.694 1.00 33.77 O
ATOM 27 O5' A B1109 -126.748 63.522 -5.805 1.00 33.77 O
TER
Atoms:
C2: (-118.781,61.408,-8.970)
OP1: (-122.998,54.949,-10.442)
OP2: (-122.638,56.841,-12.119)
C4: (-119.132,61.818,-11.246)
O5': (-121.228,56.703,-10.046)
C3': (-120.719,58.011,-7.532)
C1': (-118.677,58.995,-8.172)
O4': (-118.752,57.707,-8.751)
C5': (-120.436,56.009,-9.104)
P: (-122.077,55.904,-11.127)
O2: (-118.591,61.833,-7.812)
C4': (-119.807,56.947,-8.112)
C2': (-119.730,59.068,-7.069)
O2': (-119.126,58.681,-5.846)
N1: (-118.878,60.016,-9.241)
N3: (-118.924,62.280,-10.005)
N4: (-119.273,62.691,-12.239)
C6: (-119.074,59.574,-10.528)
C5: (-119.210,60.430,-11.542)
O3': (-121.560,57.525,-6.499)
OP1: (-122.998,54.949,-10.442)
OP2: (-122.638,56.841,-12.119)
C4: (-119.132,61.818,-11.246)
O5': (-121.228,56.703,-10.046)
C3': (-120.719,58.011,-7.532)
C1': (-118.677,58.995,-8.172)
O4': (-118.752,57.707,-8.751)
C5': (-120.436,56.009,-9.104)
P: (-122.077,55.904,-11.127)
O2: (-118.591,61.833,-7.812)
C4': (-119.807,56.947,-8.112)
C2': (-119.730,59.068,-7.069)
O2': (-119.126,58.681,-5.846)
N1: (-118.878,60.016,-9.241)
N3: (-118.924,62.280,-10.005)
N4: (-119.273,62.691,-12.239)
C6: (-119.074,59.574,-10.528)
C5: (-119.210,60.430,-11.542)
O3': (-121.560,57.525,-6.499)
OP1: (-123.771,56.952,-5.519)
OP2: (-123.511,57.431,-8.019)
C3': (-123.944,62.102,-5.783)
C1': (-122.154,62.836,-7.146)
C5': (-122.772,59.908,-5.174)
O4': (-121.735,61.691,-6.436)
C8: (-122.586,61.233,-9.106)
O2': (-123.070,64.374,-5.560)
C6: (-122.496,63.342,-11.965)
C5: (-122.510,62.615,-10.745)
C4: (-122.293,63.353,-9.588)
P: (-123.144,57.733,-6.613)
C4': (-122.666,61.398,-5.358)
C2': (-123.427,63.357,-6.492)
C2: (-122.096,65.249,-10.690)
N1: (-122.283,64.678,-11.887)
N3: (-122.075,64.680,-9.488)
N6: (-122.675,62.827,-13.195)
N7: (-122.689,61.267,-10.419)
N9: (-122.358,62.466,-8.549)
O5': (-123.316,59.292,-6.336)
O3': (-124.815,62.367,-4.700)
OP2: (-123.511,57.431,-8.019)
C3': (-123.944,62.102,-5.783)
C1': (-122.154,62.836,-7.146)
C5': (-122.772,59.908,-5.174)
O4': (-121.735,61.691,-6.436)
C8: (-122.586,61.233,-9.106)
O2': (-123.070,64.374,-5.560)
C6: (-122.496,63.342,-11.965)
C5: (-122.510,62.615,-10.745)
C4: (-122.293,63.353,-9.588)
P: (-123.144,57.733,-6.613)
C4': (-122.666,61.398,-5.358)
C2': (-123.427,63.357,-6.492)
C2: (-122.096,65.249,-10.690)
N1: (-122.283,64.678,-11.887)
N3: (-122.075,64.680,-9.488)
N6: (-122.675,62.827,-13.195)
N7: (-122.689,61.267,-10.419)
N9: (-122.358,62.466,-8.549)
O5': (-123.316,59.292,-6.336)
O3': (-124.815,62.367,-4.700)
Image (generated by PyMOL):