Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01382:01383
Extra
PDB:
ATOM 1 O3' U A1381 57.082 183.574 63.359 1.00 56.66 O
ATOM 2 P C A1382 56.055 183.405 64.587 1.00 60.45 P
ATOM 3 OP1 C A1382 55.884 184.749 65.198 1.00 61.33 O
ATOM 4 OP2 C A1382 56.492 182.268 65.438 1.00 60.84 O
ATOM 5 O5' C A1382 54.686 183.004 63.882 1.00 58.71 O
ATOM 6 C5' C A1382 54.120 183.847 62.871 1.00 59.08 C
ATOM 7 C4' C A1382 53.088 183.092 62.076 1.00 58.95 C
ATOM 8 O4' C A1382 53.724 182.032 61.318 1.00 59.51 O
ATOM 9 C3' C A1382 52.058 182.364 62.907 1.00 58.77 C
ATOM 10 O3' C A1382 51.060 183.248 63.377 1.00 59.44 O
ATOM 11 C2' C A1382 51.546 181.305 61.941 1.00 58.01 C
ATOM 12 O2' C A1382 50.611 181.801 61.011 1.00 56.68 O
ATOM 13 C1' C A1382 52.834 180.932 61.205 1.00 58.97 C
ATOM 14 N1 C A1382 53.486 179.734 61.759 1.00 59.27 N
ATOM 15 C2 C A1382 53.154 178.495 61.229 1.00 59.39 C
ATOM 16 O2 C A1382 52.369 178.444 60.278 1.00 61.60 O
ATOM 17 N3 C A1382 53.695 177.380 61.757 1.00 59.94 N
ATOM 18 C4 C A1382 54.550 177.473 62.770 1.00 60.19 C
ATOM 19 N4 C A1382 55.039 176.341 63.274 1.00 60.06 N
ATOM 20 C5 C A1382 54.936 178.728 63.314 1.00 60.83 C
ATOM 21 C6 C A1382 54.384 179.825 62.784 1.00 59.90 C
ATOM 22 P A A1383 50.301 182.910 64.746 1.00 60.75 P
ATOM 23 OP1 A A1383 49.396 184.045 65.053 1.00 60.87 O
ATOM 24 OP2 A A1383 51.316 182.493 65.744 1.00 61.41 O
ATOM 25 O5' A A1383 49.422 181.638 64.360 1.00 60.72 O
TER
ATOM 1 O3' C B1382 51.060 183.248 63.377 1.00 59.44 O
ATOM 2 P A B1383 50.301 182.910 64.746 1.00 60.75 P
ATOM 3 OP1 A B1383 49.396 184.045 65.053 1.00 60.87 O
ATOM 4 OP2 A B1383 51.316 182.493 65.744 1.00 61.41 O
ATOM 5 O5' A B1383 49.422 181.638 64.360 1.00 60.72 O
ATOM 6 C5' A B1383 48.488 181.699 63.264 1.00 61.37 C
ATOM 7 C4' A B1383 47.874 180.343 63.004 1.00 61.23 C
ATOM 8 O4' A B1383 48.845 179.446 62.409 1.00 61.93 O
ATOM 9 C3' A B1383 47.383 179.597 64.226 1.00 61.69 C
ATOM 10 O3' A B1383 46.121 180.074 64.659 1.00 63.66 O
ATOM 11 C2' A B1383 47.344 178.157 63.737 1.00 61.42 C
ATOM 12 O2' A B1383 46.189 177.860 62.978 1.00 58.71 O
ATOM 13 C1' A B1383 48.588 178.116 62.842 1.00 61.96 C
ATOM 14 N9 A B1383 49.786 177.613 63.518 1.00 61.77 N
ATOM 15 C8 A B1383 50.815 178.342 64.060 1.00 62.50 C
ATOM 16 N7 A B1383 51.766 177.609 64.580 1.00 61.79 N
ATOM 17 C5 A B1383 51.334 176.310 64.372 1.00 61.65 C
ATOM 18 C6 A B1383 51.900 175.073 64.691 1.00 62.08 C
ATOM 19 N6 A B1383 53.073 174.941 65.311 1.00 62.87 N
ATOM 20 N1 A B1383 51.214 173.961 64.350 1.00 62.13 N
ATOM 21 C2 A B1383 50.040 174.100 63.729 1.00 61.75 C
ATOM 22 N3 A B1383 49.404 175.210 63.373 1.00 62.29 N
ATOM 23 C4 A B1383 50.113 176.295 63.727 1.00 61.69 C
ATOM 24 P G B1384 45.605 179.716 66.136 1.00 65.82 P
ATOM 25 OP1 G B1384 44.353 180.481 66.375 1.00 65.37 O
ATOM 26 OP2 G B1384 46.736 179.834 67.103 1.00 65.46 O
ATOM 27 O5' G B1384 45.256 178.171 66.017 1.00 62.81 O
TER
ATOM 2 P C A1382 56.055 183.405 64.587 1.00 60.45 P
ATOM 3 OP1 C A1382 55.884 184.749 65.198 1.00 61.33 O
ATOM 4 OP2 C A1382 56.492 182.268 65.438 1.00 60.84 O
ATOM 5 O5' C A1382 54.686 183.004 63.882 1.00 58.71 O
ATOM 6 C5' C A1382 54.120 183.847 62.871 1.00 59.08 C
ATOM 7 C4' C A1382 53.088 183.092 62.076 1.00 58.95 C
ATOM 8 O4' C A1382 53.724 182.032 61.318 1.00 59.51 O
ATOM 9 C3' C A1382 52.058 182.364 62.907 1.00 58.77 C
ATOM 10 O3' C A1382 51.060 183.248 63.377 1.00 59.44 O
ATOM 11 C2' C A1382 51.546 181.305 61.941 1.00 58.01 C
ATOM 12 O2' C A1382 50.611 181.801 61.011 1.00 56.68 O
ATOM 13 C1' C A1382 52.834 180.932 61.205 1.00 58.97 C
ATOM 14 N1 C A1382 53.486 179.734 61.759 1.00 59.27 N
ATOM 15 C2 C A1382 53.154 178.495 61.229 1.00 59.39 C
ATOM 16 O2 C A1382 52.369 178.444 60.278 1.00 61.60 O
ATOM 17 N3 C A1382 53.695 177.380 61.757 1.00 59.94 N
ATOM 18 C4 C A1382 54.550 177.473 62.770 1.00 60.19 C
ATOM 19 N4 C A1382 55.039 176.341 63.274 1.00 60.06 N
ATOM 20 C5 C A1382 54.936 178.728 63.314 1.00 60.83 C
ATOM 21 C6 C A1382 54.384 179.825 62.784 1.00 59.90 C
ATOM 22 P A A1383 50.301 182.910 64.746 1.00 60.75 P
ATOM 23 OP1 A A1383 49.396 184.045 65.053 1.00 60.87 O
ATOM 24 OP2 A A1383 51.316 182.493 65.744 1.00 61.41 O
ATOM 25 O5' A A1383 49.422 181.638 64.360 1.00 60.72 O
TER
ATOM 1 O3' C B1382 51.060 183.248 63.377 1.00 59.44 O
ATOM 2 P A B1383 50.301 182.910 64.746 1.00 60.75 P
ATOM 3 OP1 A B1383 49.396 184.045 65.053 1.00 60.87 O
ATOM 4 OP2 A B1383 51.316 182.493 65.744 1.00 61.41 O
ATOM 5 O5' A B1383 49.422 181.638 64.360 1.00 60.72 O
ATOM 6 C5' A B1383 48.488 181.699 63.264 1.00 61.37 C
ATOM 7 C4' A B1383 47.874 180.343 63.004 1.00 61.23 C
ATOM 8 O4' A B1383 48.845 179.446 62.409 1.00 61.93 O
ATOM 9 C3' A B1383 47.383 179.597 64.226 1.00 61.69 C
ATOM 10 O3' A B1383 46.121 180.074 64.659 1.00 63.66 O
ATOM 11 C2' A B1383 47.344 178.157 63.737 1.00 61.42 C
ATOM 12 O2' A B1383 46.189 177.860 62.978 1.00 58.71 O
ATOM 13 C1' A B1383 48.588 178.116 62.842 1.00 61.96 C
ATOM 14 N9 A B1383 49.786 177.613 63.518 1.00 61.77 N
ATOM 15 C8 A B1383 50.815 178.342 64.060 1.00 62.50 C
ATOM 16 N7 A B1383 51.766 177.609 64.580 1.00 61.79 N
ATOM 17 C5 A B1383 51.334 176.310 64.372 1.00 61.65 C
ATOM 18 C6 A B1383 51.900 175.073 64.691 1.00 62.08 C
ATOM 19 N6 A B1383 53.073 174.941 65.311 1.00 62.87 N
ATOM 20 N1 A B1383 51.214 173.961 64.350 1.00 62.13 N
ATOM 21 C2 A B1383 50.040 174.100 63.729 1.00 61.75 C
ATOM 22 N3 A B1383 49.404 175.210 63.373 1.00 62.29 N
ATOM 23 C4 A B1383 50.113 176.295 63.727 1.00 61.69 C
ATOM 24 P G B1384 45.605 179.716 66.136 1.00 65.82 P
ATOM 25 OP1 G B1384 44.353 180.481 66.375 1.00 65.37 O
ATOM 26 OP2 G B1384 46.736 179.834 67.103 1.00 65.46 O
ATOM 27 O5' G B1384 45.256 178.171 66.017 1.00 62.81 O
TER
Atoms:
C2: (53.154,178.495,61.229)
OP1: (55.884,184.749,65.198)
OP2: (56.492,182.268,65.438)
C4: (54.550,177.473,62.770)
O5': (54.686,183.004,63.882)
C3': (52.058,182.364,62.907)
C1': (52.834,180.932,61.205)
O4': (53.724,182.032,61.318)
C5': (54.120,183.847,62.871)
P: (56.055,183.405,64.587)
O2: (52.369,178.444,60.278)
C4': (53.088,183.092,62.076)
C2': (51.546,181.305,61.941)
O2': (50.611,181.801,61.011)
N1: (53.486,179.734,61.759)
N3: (53.695,177.380,61.757)
N4: (55.039,176.341,63.274)
C6: (54.384,179.825,62.784)
C5: (54.936,178.728,63.314)
O3': (51.060,183.248,63.377)
OP1: (55.884,184.749,65.198)
OP2: (56.492,182.268,65.438)
C4: (54.550,177.473,62.770)
O5': (54.686,183.004,63.882)
C3': (52.058,182.364,62.907)
C1': (52.834,180.932,61.205)
O4': (53.724,182.032,61.318)
C5': (54.120,183.847,62.871)
P: (56.055,183.405,64.587)
O2: (52.369,178.444,60.278)
C4': (53.088,183.092,62.076)
C2': (51.546,181.305,61.941)
O2': (50.611,181.801,61.011)
N1: (53.486,179.734,61.759)
N3: (53.695,177.380,61.757)
N4: (55.039,176.341,63.274)
C6: (54.384,179.825,62.784)
C5: (54.936,178.728,63.314)
O3': (51.060,183.248,63.377)
OP1: (49.396,184.045,65.053)
OP2: (51.316,182.493,65.744)
C3': (47.383,179.597,64.226)
C1': (48.588,178.116,62.842)
C5': (48.488,181.699,63.264)
O4': (48.845,179.446,62.409)
C8: (50.815,178.342,64.060)
O2': (46.189,177.860,62.978)
C6: (51.900,175.073,64.691)
C5: (51.334,176.310,64.372)
C4: (50.113,176.295,63.727)
P: (50.301,182.910,64.746)
C4': (47.874,180.343,63.004)
C2': (47.344,178.157,63.737)
C2: (50.040,174.100,63.729)
N1: (51.214,173.961,64.350)
N3: (49.404,175.210,63.373)
N6: (53.073,174.941,65.311)
N7: (51.766,177.609,64.580)
N9: (49.786,177.613,63.518)
O5': (49.422,181.638,64.360)
O3': (46.121,180.074,64.659)
OP2: (51.316,182.493,65.744)
C3': (47.383,179.597,64.226)
C1': (48.588,178.116,62.842)
C5': (48.488,181.699,63.264)
O4': (48.845,179.446,62.409)
C8: (50.815,178.342,64.060)
O2': (46.189,177.860,62.978)
C6: (51.900,175.073,64.691)
C5: (51.334,176.310,64.372)
C4: (50.113,176.295,63.727)
P: (50.301,182.910,64.746)
C4': (47.874,180.343,63.004)
C2': (47.344,178.157,63.737)
C2: (50.040,174.100,63.729)
N1: (51.214,173.961,64.350)
N3: (49.404,175.210,63.373)
N6: (53.073,174.941,65.311)
N7: (51.766,177.609,64.580)
N9: (49.786,177.613,63.518)
O5': (49.422,181.638,64.360)
O3': (46.121,180.074,64.659)
Image (generated by PyMOL):