ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0484:0483

Extra

PDB:
ATOM 1 O3' A A 483 33.688 179.421 72.717 1.00 67.91 O
ATOM 2 P G A 484 32.253 178.952 72.156 1.00 70.56 P
ATOM 3 OP1 G A 484 31.585 180.158 71.593 1.00 70.79 O
ATOM 4 OP2 G A 484 31.566 178.163 73.214 1.00 68.20 O
ATOM 5 O5' G A 484 32.629 177.987 70.943 1.00 70.58 O
ATOM 6 C5' G A 484 33.632 178.377 69.990 1.00 71.78 C
ATOM 7 C4' G A 484 34.346 177.164 69.442 1.00 74.12 C
ATOM 8 O4' G A 484 34.845 176.358 70.547 1.00 73.79 O
ATOM 9 C3' G A 484 33.517 176.223 68.577 1.00 76.17 C
ATOM 10 O3' G A 484 34.354 175.661 67.576 1.00 81.30 O
ATOM 11 C2' G A 484 33.107 175.136 69.560 1.00 74.87 C
ATOM 12 O2' G A 484 32.842 173.903 68.926 1.00 76.21 O
ATOM 13 C1' G A 484 34.353 175.037 70.436 1.00 72.56 C
ATOM 14 N9 G A 484 34.068 174.540 71.778 1.00 69.97 N
ATOM 15 C8 G A 484 33.196 175.082 72.689 1.00 68.96 C
ATOM 16 N7 G A 484 33.126 174.403 73.798 1.00 67.73 N
ATOM 17 C5 G A 484 34.008 173.351 73.615 1.00 68.07 C
ATOM 18 C6 G A 484 34.345 172.280 74.477 1.00 67.99 C
ATOM 19 O6 G A 484 33.915 172.038 75.611 1.00 69.53 O
ATOM 20 N1 G A 484 35.282 171.436 73.898 1.00 67.34 N
ATOM 21 C2 G A 484 35.822 171.595 72.651 1.00 67.24 C
ATOM 22 N2 G A 484 36.706 170.662 72.276 1.00 67.77 N
ATOM 23 N3 G A 484 35.517 172.591 71.834 1.00 67.32 N
ATOM 24 C4 G A 484 34.607 173.425 72.376 1.00 68.39 C
ATOM 25 P A A 485 34.497 176.392 66.153 1.00 85.76 P
ATOM 26 OP1 A A 485 35.887 176.907 66.050 1.00 85.44 O
ATOM 27 OP2 A A 485 33.352 177.332 66.003 1.00 85.36 O
ATOM 28 O5' A A 485 34.344 175.209 65.096 1.00 89.31 O
TER

ATOM 1 O3' C B 482 31.172 177.315 77.227 1.00 63.35 O
ATOM 2 P A B 483 31.812 178.790 77.264 1.00 63.71 P
ATOM 3 OP1 A B 483 32.324 179.053 78.633 1.00 63.58 O
ATOM 4 OP2 A B 483 30.821 179.719 76.659 1.00 65.34 O
ATOM 5 O5' A B 483 33.061 178.711 76.286 1.00 61.33 O
ATOM 6 C5' A B 483 33.717 179.903 75.856 1.00 61.51 C
ATOM 7 C4' A B 483 34.786 179.566 74.862 1.00 62.83 C
ATOM 8 O4' A B 483 35.831 178.818 75.523 1.00 62.53 O
ATOM 9 C3' A B 483 34.339 178.661 73.729 1.00 64.58 C
ATOM 10 O3' A B 483 33.688 179.421 72.717 1.00 67.91 O
ATOM 11 C2' A B 483 35.652 178.020 73.281 1.00 63.70 C
ATOM 12 O2' A B 483 36.437 178.816 72.418 1.00 62.34 O
ATOM 13 C1' A B 483 36.386 177.881 74.618 1.00 63.44 C
ATOM 14 N9 A B 483 36.291 176.557 75.220 1.00 63.12 N
ATOM 15 C8 A B 483 35.501 176.155 76.264 1.00 63.74 C
ATOM 16 N7 A B 483 35.668 174.901 76.598 1.00 65.47 N
ATOM 17 C5 A B 483 36.629 174.445 75.706 1.00 64.81 C
ATOM 18 C6 A B 483 37.247 173.193 75.536 1.00 65.20 C
ATOM 19 N6 A B 483 36.979 172.121 76.287 1.00 65.23 N
ATOM 20 N1 A B 483 38.159 173.076 74.551 1.00 65.43 N
ATOM 21 C2 A B 483 38.423 174.145 73.793 1.00 65.36 C
ATOM 22 N3 A B 483 37.910 175.369 73.855 1.00 64.68 N
ATOM 23 C4 A B 483 37.011 175.453 74.847 1.00 63.83 C
ATOM 24 P G B 484 32.253 178.952 72.156 1.00 70.56 P
ATOM 25 OP1 G B 484 31.585 180.158 71.593 1.00 70.79 O
ATOM 26 OP2 G B 484 31.566 178.163 73.214 1.00 68.20 O
ATOM 27 O5' G B 484 32.629 177.987 70.943 1.00 70.58 O
TER

Atoms:
OP1: (31.585,180.158,71.593)
OP2: (31.566,178.163,73.214)
C3': (33.517,176.223,68.577)
C1': (34.353,175.037,70.436)
C5': (33.632,178.377,69.990)
O6: (33.915,172.038,75.611)
O4': (34.845,176.358,70.547)
C8: (33.196,175.082,72.689)
C2: (35.822,171.595,72.651)
C6: (34.345,172.280,74.477)
C5: (34.008,173.351,73.615)
C4: (34.607,173.425,72.376)
P: (32.253,178.952,72.156)
C4': (34.346,177.164,69.442)
C2': (33.107,175.136,69.560)
O2': (32.842,173.903,68.926)
N1: (35.282,171.436,73.898)
N2: (36.706,170.662,72.276)
N3: (35.517,172.591,71.834)
N7: (33.126,174.403,73.798)
N9: (34.068,174.540,71.778)
O5': (32.629,177.987,70.943)
O3': (34.354,175.661,67.576)
OP1: (32.324,179.053,78.633)
OP2: (30.821,179.719,76.659)
C3': (34.339,178.661,73.729)
C1': (36.386,177.881,74.618)
C5': (33.717,179.903,75.856)
O4': (35.831,178.818,75.523)
C8: (35.501,176.155,76.264)
O2': (36.437,178.816,72.418)
C6: (37.247,173.193,75.536)
C5: (36.629,174.445,75.706)
C4: (37.011,175.453,74.847)
P: (31.812,178.790,77.264)
C4': (34.786,179.566,74.862)
C2': (35.652,178.020,73.281)
C2: (38.423,174.145,73.793)
N1: (38.159,173.076,74.551)
N3: (37.910,175.369,73.855)
N6: (36.979,172.121,76.287)
N7: (35.668,174.901,76.598)
N9: (36.291,176.557,75.220)
O5': (33.061,178.711,76.286)
O3': (33.688,179.421,72.717)
Image (generated by PyMOL):
PyMOL image
show in jmol