Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0428:0429
Extra
PDB:
ATOM 1 O3' A A 427 56.861 116.526 35.537 1.00 51.06 O
ATOM 2 P C A 428 55.657 117.494 35.980 1.00 52.53 P
ATOM 3 OP1 C A 428 55.288 117.135 37.374 1.00 51.62 O
ATOM 4 OP2 C A 428 54.619 117.487 34.917 1.00 54.46 O
ATOM 5 O5' C A 428 56.301 118.951 35.993 1.00 54.91 O
ATOM 6 C5' C A 428 57.278 119.331 36.987 1.00 57.09 C
ATOM 7 C4' C A 428 57.657 120.779 36.806 1.00 58.83 C
ATOM 8 O4' C A 428 58.161 120.958 35.460 1.00 59.05 O
ATOM 9 C3' C A 428 56.506 121.768 36.950 1.00 58.83 C
ATOM 10 O3' C A 428 56.429 122.185 38.315 1.00 61.56 O
ATOM 11 C2' C A 428 56.931 122.921 36.050 1.00 58.52 C
ATOM 12 O2' C A 428 57.803 123.813 36.706 1.00 57.40 O
ATOM 13 C1' C A 428 57.702 122.191 34.943 1.00 58.84 C
ATOM 14 N1 C A 428 56.952 121.911 33.711 1.00 58.96 N
ATOM 15 C2 C A 428 57.084 122.778 32.616 1.00 59.32 C
ATOM 16 O2 C A 428 57.797 123.785 32.718 1.00 59.31 O
ATOM 17 N3 C A 428 56.438 122.494 31.472 1.00 60.05 N
ATOM 18 C4 C A 428 55.691 121.398 31.386 1.00 59.89 C
ATOM 19 N4 C A 428 55.104 121.141 30.222 1.00 61.31 N
ATOM 20 C5 C A 428 55.519 120.513 32.487 1.00 60.40 C
ATOM 21 C6 C A 428 56.156 120.807 33.620 1.00 59.24 C
ATOM 22 P A A 429 55.046 122.738 38.924 1.00 64.55 P
ATOM 23 OP1 A A 429 55.321 123.106 40.342 1.00 63.60 O
ATOM 24 OP2 A A 429 53.953 121.779 38.613 1.00 64.41 O
ATOM 25 O5' A A 429 54.775 124.083 38.122 1.00 64.12 O
TER
ATOM 1 O3' C B 428 56.429 122.185 38.315 1.00 61.56 O
ATOM 2 P A B 429 55.046 122.738 38.924 1.00 64.55 P
ATOM 3 OP1 A B 429 55.321 123.106 40.342 1.00 63.60 O
ATOM 4 OP2 A B 429 53.953 121.779 38.613 1.00 64.41 O
ATOM 5 O5' A B 429 54.775 124.083 38.122 1.00 64.12 O
ATOM 6 C5' A B 429 55.679 125.196 38.221 1.00 65.23 C
ATOM 7 C4' A B 429 55.247 126.292 37.279 1.00 65.98 C
ATOM 8 O4' A B 429 55.228 125.760 35.927 1.00 66.74 O
ATOM 9 C3' A B 429 53.853 126.857 37.524 1.00 65.83 C
ATOM 10 O3' A B 429 53.822 128.215 37.145 1.00 65.03 O
ATOM 11 C2' A B 429 52.974 126.029 36.599 1.00 66.01 C
ATOM 12 O2' A B 429 51.818 126.726 36.179 1.00 64.96 O
ATOM 13 C1' A B 429 53.908 125.769 35.421 1.00 67.13 C
ATOM 14 N9 A B 429 53.653 124.458 34.828 1.00 70.13 N
ATOM 15 C8 A B 429 53.646 123.234 35.454 1.00 70.40 C
ATOM 16 N7 A B 429 53.350 122.238 34.660 1.00 72.03 N
ATOM 17 C5 A B 429 53.151 122.843 33.428 1.00 73.21 C
ATOM 18 C6 A B 429 52.798 122.332 32.169 1.00 74.25 C
ATOM 19 N6 A B 429 52.546 121.041 31.940 1.00 74.88 N
ATOM 20 N1 A B 429 52.705 123.202 31.140 1.00 75.26 N
ATOM 21 C2 A B 429 52.939 124.499 31.373 1.00 75.04 C
ATOM 22 N3 A B 429 53.261 125.103 32.514 1.00 74.79 N
ATOM 23 C4 A B 429 53.351 124.208 33.514 1.00 72.67 C
ATOM 24 P A B 430 53.565 129.333 38.255 1.00 65.12 P
ATOM 25 OP1 A B 430 54.456 128.987 39.404 1.00 64.61 O
ATOM 26 OP2 A B 430 52.100 129.450 38.472 1.00 64.76 O
ATOM 27 O5' A B 430 54.079 130.665 37.550 1.00 63.22 O
TER
ATOM 2 P C A 428 55.657 117.494 35.980 1.00 52.53 P
ATOM 3 OP1 C A 428 55.288 117.135 37.374 1.00 51.62 O
ATOM 4 OP2 C A 428 54.619 117.487 34.917 1.00 54.46 O
ATOM 5 O5' C A 428 56.301 118.951 35.993 1.00 54.91 O
ATOM 6 C5' C A 428 57.278 119.331 36.987 1.00 57.09 C
ATOM 7 C4' C A 428 57.657 120.779 36.806 1.00 58.83 C
ATOM 8 O4' C A 428 58.161 120.958 35.460 1.00 59.05 O
ATOM 9 C3' C A 428 56.506 121.768 36.950 1.00 58.83 C
ATOM 10 O3' C A 428 56.429 122.185 38.315 1.00 61.56 O
ATOM 11 C2' C A 428 56.931 122.921 36.050 1.00 58.52 C
ATOM 12 O2' C A 428 57.803 123.813 36.706 1.00 57.40 O
ATOM 13 C1' C A 428 57.702 122.191 34.943 1.00 58.84 C
ATOM 14 N1 C A 428 56.952 121.911 33.711 1.00 58.96 N
ATOM 15 C2 C A 428 57.084 122.778 32.616 1.00 59.32 C
ATOM 16 O2 C A 428 57.797 123.785 32.718 1.00 59.31 O
ATOM 17 N3 C A 428 56.438 122.494 31.472 1.00 60.05 N
ATOM 18 C4 C A 428 55.691 121.398 31.386 1.00 59.89 C
ATOM 19 N4 C A 428 55.104 121.141 30.222 1.00 61.31 N
ATOM 20 C5 C A 428 55.519 120.513 32.487 1.00 60.40 C
ATOM 21 C6 C A 428 56.156 120.807 33.620 1.00 59.24 C
ATOM 22 P A A 429 55.046 122.738 38.924 1.00 64.55 P
ATOM 23 OP1 A A 429 55.321 123.106 40.342 1.00 63.60 O
ATOM 24 OP2 A A 429 53.953 121.779 38.613 1.00 64.41 O
ATOM 25 O5' A A 429 54.775 124.083 38.122 1.00 64.12 O
TER
ATOM 1 O3' C B 428 56.429 122.185 38.315 1.00 61.56 O
ATOM 2 P A B 429 55.046 122.738 38.924 1.00 64.55 P
ATOM 3 OP1 A B 429 55.321 123.106 40.342 1.00 63.60 O
ATOM 4 OP2 A B 429 53.953 121.779 38.613 1.00 64.41 O
ATOM 5 O5' A B 429 54.775 124.083 38.122 1.00 64.12 O
ATOM 6 C5' A B 429 55.679 125.196 38.221 1.00 65.23 C
ATOM 7 C4' A B 429 55.247 126.292 37.279 1.00 65.98 C
ATOM 8 O4' A B 429 55.228 125.760 35.927 1.00 66.74 O
ATOM 9 C3' A B 429 53.853 126.857 37.524 1.00 65.83 C
ATOM 10 O3' A B 429 53.822 128.215 37.145 1.00 65.03 O
ATOM 11 C2' A B 429 52.974 126.029 36.599 1.00 66.01 C
ATOM 12 O2' A B 429 51.818 126.726 36.179 1.00 64.96 O
ATOM 13 C1' A B 429 53.908 125.769 35.421 1.00 67.13 C
ATOM 14 N9 A B 429 53.653 124.458 34.828 1.00 70.13 N
ATOM 15 C8 A B 429 53.646 123.234 35.454 1.00 70.40 C
ATOM 16 N7 A B 429 53.350 122.238 34.660 1.00 72.03 N
ATOM 17 C5 A B 429 53.151 122.843 33.428 1.00 73.21 C
ATOM 18 C6 A B 429 52.798 122.332 32.169 1.00 74.25 C
ATOM 19 N6 A B 429 52.546 121.041 31.940 1.00 74.88 N
ATOM 20 N1 A B 429 52.705 123.202 31.140 1.00 75.26 N
ATOM 21 C2 A B 429 52.939 124.499 31.373 1.00 75.04 C
ATOM 22 N3 A B 429 53.261 125.103 32.514 1.00 74.79 N
ATOM 23 C4 A B 429 53.351 124.208 33.514 1.00 72.67 C
ATOM 24 P A B 430 53.565 129.333 38.255 1.00 65.12 P
ATOM 25 OP1 A B 430 54.456 128.987 39.404 1.00 64.61 O
ATOM 26 OP2 A B 430 52.100 129.450 38.472 1.00 64.76 O
ATOM 27 O5' A B 430 54.079 130.665 37.550 1.00 63.22 O
TER
Atoms:
C2: (57.084,122.778,32.616)
OP1: (55.288,117.135,37.374)
OP2: (54.619,117.487,34.917)
C4: (55.691,121.398,31.386)
O5': (56.301,118.951,35.993)
C3': (56.506,121.768,36.950)
C1': (57.702,122.191,34.943)
O4': (58.161,120.958,35.460)
C5': (57.278,119.331,36.987)
P: (55.657,117.494,35.980)
O2: (57.797,123.785,32.718)
C4': (57.657,120.779,36.806)
C2': (56.931,122.921,36.050)
O2': (57.803,123.813,36.706)
N1: (56.952,121.911,33.711)
N3: (56.438,122.494,31.472)
N4: (55.104,121.141,30.222)
C6: (56.156,120.807,33.620)
C5: (55.519,120.513,32.487)
O3': (56.429,122.185,38.315)
OP1: (55.288,117.135,37.374)
OP2: (54.619,117.487,34.917)
C4: (55.691,121.398,31.386)
O5': (56.301,118.951,35.993)
C3': (56.506,121.768,36.950)
C1': (57.702,122.191,34.943)
O4': (58.161,120.958,35.460)
C5': (57.278,119.331,36.987)
P: (55.657,117.494,35.980)
O2: (57.797,123.785,32.718)
C4': (57.657,120.779,36.806)
C2': (56.931,122.921,36.050)
O2': (57.803,123.813,36.706)
N1: (56.952,121.911,33.711)
N3: (56.438,122.494,31.472)
N4: (55.104,121.141,30.222)
C6: (56.156,120.807,33.620)
C5: (55.519,120.513,32.487)
O3': (56.429,122.185,38.315)
OP1: (55.321,123.106,40.342)
OP2: (53.953,121.779,38.613)
C3': (53.853,126.857,37.524)
C1': (53.908,125.769,35.421)
C5': (55.679,125.196,38.221)
O4': (55.228,125.760,35.927)
C8: (53.646,123.234,35.454)
O2': (51.818,126.726,36.179)
C6: (52.798,122.332,32.169)
C5: (53.151,122.843,33.428)
C4: (53.351,124.208,33.514)
P: (55.046,122.738,38.924)
C4': (55.247,126.292,37.279)
C2': (52.974,126.029,36.599)
C2: (52.939,124.499,31.373)
N1: (52.705,123.202,31.140)
N3: (53.261,125.103,32.514)
N6: (52.546,121.041,31.940)
N7: (53.350,122.238,34.660)
N9: (53.653,124.458,34.828)
O5': (54.775,124.083,38.122)
O3': (53.822,128.215,37.145)
OP2: (53.953,121.779,38.613)
C3': (53.853,126.857,37.524)
C1': (53.908,125.769,35.421)
C5': (55.679,125.196,38.221)
O4': (55.228,125.760,35.927)
C8: (53.646,123.234,35.454)
O2': (51.818,126.726,36.179)
C6: (52.798,122.332,32.169)
C5: (53.151,122.843,33.428)
C4: (53.351,124.208,33.514)
P: (55.046,122.738,38.924)
C4': (55.247,126.292,37.279)
C2': (52.974,126.029,36.599)
C2: (52.939,124.499,31.373)
N1: (52.705,123.202,31.140)
N3: (53.261,125.103,32.514)
N6: (52.546,121.041,31.940)
N7: (53.350,122.238,34.660)
N9: (53.653,124.458,34.828)
O5': (54.775,124.083,38.122)
O3': (53.822,128.215,37.145)
Image (generated by PyMOL):