Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:01236:01237
Extra
PDB:
ATOM 1 O3' U A1235 4.447 86.113 58.752 1.00 49.99 O
ATOM 2 P C A1236 5.317 85.329 57.652 1.00 50.77 P
ATOM 3 OP1 C A1236 4.569 85.361 56.369 1.00 50.30 O
ATOM 4 OP2 C A1236 5.715 84.018 58.232 1.00 50.32 O
ATOM 5 O5' C A1236 6.610 86.248 57.503 1.00 51.38 O
ATOM 6 C5' C A1236 7.748 85.824 56.729 1.00 50.82 C
ATOM 7 C4' C A1236 8.730 86.964 56.587 1.00 50.28 C
ATOM 8 O4' C A1236 8.135 88.035 55.814 1.00 49.98 O
ATOM 9 C3' C A1236 9.122 87.640 57.888 1.00 50.66 C
ATOM 10 O3' C A1236 10.140 86.904 58.542 1.00 50.98 O
ATOM 11 C2' C A1236 9.605 89.006 57.421 1.00 50.93 C
ATOM 12 O2' C A1236 10.927 88.975 56.920 1.00 50.15 O
ATOM 13 C1' C A1236 8.649 89.280 56.258 1.00 50.33 C
ATOM 14 N1 C A1236 7.525 90.191 56.549 1.00 51.15 N
ATOM 15 C2 C A1236 7.755 91.580 56.527 1.00 52.04 C
ATOM 16 O2 C A1236 8.903 92.004 56.319 1.00 53.35 O
ATOM 17 N3 C A1236 6.719 92.423 56.735 1.00 51.98 N
ATOM 18 C4 C A1236 5.498 91.937 56.963 1.00 51.58 C
ATOM 19 N4 C A1236 4.504 92.811 57.126 1.00 52.99 N
ATOM 20 C5 C A1236 5.241 90.536 57.023 1.00 50.43 C
ATOM 21 C6 C A1236 6.274 89.706 56.815 1.00 50.85 C
ATOM 22 P A A1237 10.167 86.843 60.140 1.00 51.22 P
ATOM 23 OP1 A A1237 11.379 86.070 60.505 1.00 48.89 O
ATOM 24 OP2 A A1237 8.834 86.397 60.623 1.00 51.65 O
ATOM 25 O5' A A1237 10.364 88.361 60.573 1.00 53.63 O
TER
ATOM 1 O3' C B1236 10.140 86.904 58.542 1.00 50.98 O
ATOM 2 P A B1237 10.167 86.843 60.140 1.00 51.22 P
ATOM 3 OP1 A B1237 11.379 86.070 60.505 1.00 48.89 O
ATOM 4 OP2 A B1237 8.834 86.397 60.623 1.00 51.65 O
ATOM 5 O5' A B1237 10.364 88.361 60.573 1.00 53.63 O
ATOM 6 C5' A B1237 11.628 89.029 60.391 1.00 57.31 C
ATOM 7 C4' A B1237 11.521 90.467 60.829 1.00 59.59 C
ATOM 8 O4' A B1237 10.607 91.170 59.954 1.00 59.79 O
ATOM 9 C3' A B1237 10.937 90.669 62.215 1.00 62.89 C
ATOM 10 O3' A B1237 11.937 90.513 63.207 1.00 69.32 O
ATOM 11 C2' A B1237 10.389 92.089 62.142 1.00 61.20 C
ATOM 12 O2' A B1237 11.363 93.092 62.342 1.00 61.33 O
ATOM 13 C1' A B1237 9.891 92.143 60.696 1.00 59.88 C
ATOM 14 N9 A B1237 8.465 91.860 60.562 1.00 59.38 N
ATOM 15 C8 A B1237 7.836 90.641 60.582 1.00 59.59 C
ATOM 16 N7 A B1237 6.536 90.715 60.458 1.00 59.62 N
ATOM 17 C5 A B1237 6.290 92.074 60.345 1.00 60.65 C
ATOM 18 C6 A B1237 5.105 92.809 60.199 1.00 61.94 C
ATOM 19 N6 A B1237 3.893 92.253 60.156 1.00 61.93 N
ATOM 20 N1 A B1237 5.207 94.154 60.106 1.00 63.19 N
ATOM 21 C2 A B1237 6.426 94.709 60.169 1.00 61.20 C
ATOM 22 N3 A B1237 7.611 94.125 60.316 1.00 59.64 N
ATOM 23 C4 A B1237 7.471 92.791 60.398 1.00 59.81 C
ATOM 24 P U B1238 11.547 89.935 64.654 1.00 74.66 P
ATOM 25 OP1 U B1238 11.604 88.449 64.561 1.00 72.48 O
ATOM 26 OP2 U B1238 10.288 90.598 65.099 1.00 73.05 O
ATOM 27 O5' U B1238 12.760 90.432 65.569 1.00 79.71 O
TER
ATOM 2 P C A1236 5.317 85.329 57.652 1.00 50.77 P
ATOM 3 OP1 C A1236 4.569 85.361 56.369 1.00 50.30 O
ATOM 4 OP2 C A1236 5.715 84.018 58.232 1.00 50.32 O
ATOM 5 O5' C A1236 6.610 86.248 57.503 1.00 51.38 O
ATOM 6 C5' C A1236 7.748 85.824 56.729 1.00 50.82 C
ATOM 7 C4' C A1236 8.730 86.964 56.587 1.00 50.28 C
ATOM 8 O4' C A1236 8.135 88.035 55.814 1.00 49.98 O
ATOM 9 C3' C A1236 9.122 87.640 57.888 1.00 50.66 C
ATOM 10 O3' C A1236 10.140 86.904 58.542 1.00 50.98 O
ATOM 11 C2' C A1236 9.605 89.006 57.421 1.00 50.93 C
ATOM 12 O2' C A1236 10.927 88.975 56.920 1.00 50.15 O
ATOM 13 C1' C A1236 8.649 89.280 56.258 1.00 50.33 C
ATOM 14 N1 C A1236 7.525 90.191 56.549 1.00 51.15 N
ATOM 15 C2 C A1236 7.755 91.580 56.527 1.00 52.04 C
ATOM 16 O2 C A1236 8.903 92.004 56.319 1.00 53.35 O
ATOM 17 N3 C A1236 6.719 92.423 56.735 1.00 51.98 N
ATOM 18 C4 C A1236 5.498 91.937 56.963 1.00 51.58 C
ATOM 19 N4 C A1236 4.504 92.811 57.126 1.00 52.99 N
ATOM 20 C5 C A1236 5.241 90.536 57.023 1.00 50.43 C
ATOM 21 C6 C A1236 6.274 89.706 56.815 1.00 50.85 C
ATOM 22 P A A1237 10.167 86.843 60.140 1.00 51.22 P
ATOM 23 OP1 A A1237 11.379 86.070 60.505 1.00 48.89 O
ATOM 24 OP2 A A1237 8.834 86.397 60.623 1.00 51.65 O
ATOM 25 O5' A A1237 10.364 88.361 60.573 1.00 53.63 O
TER
ATOM 1 O3' C B1236 10.140 86.904 58.542 1.00 50.98 O
ATOM 2 P A B1237 10.167 86.843 60.140 1.00 51.22 P
ATOM 3 OP1 A B1237 11.379 86.070 60.505 1.00 48.89 O
ATOM 4 OP2 A B1237 8.834 86.397 60.623 1.00 51.65 O
ATOM 5 O5' A B1237 10.364 88.361 60.573 1.00 53.63 O
ATOM 6 C5' A B1237 11.628 89.029 60.391 1.00 57.31 C
ATOM 7 C4' A B1237 11.521 90.467 60.829 1.00 59.59 C
ATOM 8 O4' A B1237 10.607 91.170 59.954 1.00 59.79 O
ATOM 9 C3' A B1237 10.937 90.669 62.215 1.00 62.89 C
ATOM 10 O3' A B1237 11.937 90.513 63.207 1.00 69.32 O
ATOM 11 C2' A B1237 10.389 92.089 62.142 1.00 61.20 C
ATOM 12 O2' A B1237 11.363 93.092 62.342 1.00 61.33 O
ATOM 13 C1' A B1237 9.891 92.143 60.696 1.00 59.88 C
ATOM 14 N9 A B1237 8.465 91.860 60.562 1.00 59.38 N
ATOM 15 C8 A B1237 7.836 90.641 60.582 1.00 59.59 C
ATOM 16 N7 A B1237 6.536 90.715 60.458 1.00 59.62 N
ATOM 17 C5 A B1237 6.290 92.074 60.345 1.00 60.65 C
ATOM 18 C6 A B1237 5.105 92.809 60.199 1.00 61.94 C
ATOM 19 N6 A B1237 3.893 92.253 60.156 1.00 61.93 N
ATOM 20 N1 A B1237 5.207 94.154 60.106 1.00 63.19 N
ATOM 21 C2 A B1237 6.426 94.709 60.169 1.00 61.20 C
ATOM 22 N3 A B1237 7.611 94.125 60.316 1.00 59.64 N
ATOM 23 C4 A B1237 7.471 92.791 60.398 1.00 59.81 C
ATOM 24 P U B1238 11.547 89.935 64.654 1.00 74.66 P
ATOM 25 OP1 U B1238 11.604 88.449 64.561 1.00 72.48 O
ATOM 26 OP2 U B1238 10.288 90.598 65.099 1.00 73.05 O
ATOM 27 O5' U B1238 12.760 90.432 65.569 1.00 79.71 O
TER
Atoms:
C2: (7.755,91.580,56.527)
OP1: (4.569,85.361,56.369)
OP2: (5.715,84.018,58.232)
C4: (5.498,91.937,56.963)
O5': (6.610,86.248,57.503)
C3': (9.122,87.640,57.888)
C1': (8.649,89.280,56.258)
O4': (8.135,88.035,55.814)
C5': (7.748,85.824,56.729)
P: (5.317,85.329,57.652)
O2: (8.903,92.004,56.319)
C4': (8.730,86.964,56.587)
C2': (9.605,89.006,57.421)
O2': (10.927,88.975,56.920)
N1: (7.525,90.191,56.549)
N3: (6.719,92.423,56.735)
N4: (4.504,92.811,57.126)
C6: (6.274,89.706,56.815)
C5: (5.241,90.536,57.023)
O3': (10.140,86.904,58.542)
OP1: (4.569,85.361,56.369)
OP2: (5.715,84.018,58.232)
C4: (5.498,91.937,56.963)
O5': (6.610,86.248,57.503)
C3': (9.122,87.640,57.888)
C1': (8.649,89.280,56.258)
O4': (8.135,88.035,55.814)
C5': (7.748,85.824,56.729)
P: (5.317,85.329,57.652)
O2: (8.903,92.004,56.319)
C4': (8.730,86.964,56.587)
C2': (9.605,89.006,57.421)
O2': (10.927,88.975,56.920)
N1: (7.525,90.191,56.549)
N3: (6.719,92.423,56.735)
N4: (4.504,92.811,57.126)
C6: (6.274,89.706,56.815)
C5: (5.241,90.536,57.023)
O3': (10.140,86.904,58.542)
OP1: (11.379,86.070,60.505)
OP2: (8.834,86.397,60.623)
C3': (10.937,90.669,62.215)
C1': (9.891,92.143,60.696)
C5': (11.628,89.029,60.391)
O4': (10.607,91.170,59.954)
C8: (7.836,90.641,60.582)
O2': (11.363,93.092,62.342)
C6: (5.105,92.809,60.199)
C5: (6.290,92.074,60.345)
C4: (7.471,92.791,60.398)
P: (10.167,86.843,60.140)
C4': (11.521,90.467,60.829)
C2': (10.389,92.089,62.142)
C2: (6.426,94.709,60.169)
N1: (5.207,94.154,60.106)
N3: (7.611,94.125,60.316)
N6: (3.893,92.253,60.156)
N7: (6.536,90.715,60.458)
N9: (8.465,91.860,60.562)
O5': (10.364,88.361,60.573)
O3': (11.937,90.513,63.207)
OP2: (8.834,86.397,60.623)
C3': (10.937,90.669,62.215)
C1': (9.891,92.143,60.696)
C5': (11.628,89.029,60.391)
O4': (10.607,91.170,59.954)
C8: (7.836,90.641,60.582)
O2': (11.363,93.092,62.342)
C6: (5.105,92.809,60.199)
C5: (6.290,92.074,60.345)
C4: (7.471,92.791,60.398)
P: (10.167,86.843,60.140)
C4': (11.521,90.467,60.829)
C2': (10.389,92.089,62.142)
C2: (6.426,94.709,60.169)
N1: (5.207,94.154,60.106)
N3: (7.611,94.125,60.316)
N6: (3.893,92.253,60.156)
N7: (6.536,90.715,60.458)
N9: (8.465,91.860,60.562)
O5': (10.364,88.361,60.573)
O3': (11.937,90.513,63.207)
Image (generated by PyMOL):