Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2R8S:R117:R116
Extra
PDB:
ATOM 1 O3' A A 116 78.302 -28.000 -4.310 1.00 45.58 O
ATOM 2 P G A 117 79.728 -27.282 -4.147 1.00 48.33 P
ATOM 3 OP1 G A 117 80.078 -26.713 -5.462 1.00 47.94 O
ATOM 4 OP2 G A 117 80.648 -28.239 -3.488 1.00 43.67 O
ATOM 5 O5' G A 117 79.459 -26.087 -3.133 1.00 46.10 O
ATOM 6 C5' G A 117 78.640 -25.000 -3.495 1.00 47.56 C
ATOM 7 C4' G A 117 78.416 -24.113 -2.287 1.00 47.87 C
ATOM 8 O4' G A 117 77.706 -24.865 -1.280 1.00 47.70 O
ATOM 9 C3' G A 117 79.678 -23.663 -1.565 1.00 49.04 C
ATOM 10 O3' G A 117 80.264 -22.524 -2.187 1.00 52.40 O
ATOM 11 C2' G A 117 79.141 -23.369 -0.173 1.00 46.33 C
ATOM 12 O2' G A 117 78.417 -22.164 -0.075 1.00 47.43 O
ATOM 13 C1' G A 117 78.197 -24.540 0.008 1.00 44.22 C
ATOM 14 N9 G A 117 78.784 -25.723 0.623 1.00 42.25 N
ATOM 15 C8 G A 117 79.134 -26.908 0.029 1.00 41.51 C
ATOM 16 N7 G A 117 79.612 -27.783 0.864 1.00 40.16 N
ATOM 17 C5 G A 117 79.568 -27.141 2.092 1.00 41.28 C
ATOM 18 C6 G A 117 79.960 -27.594 3.370 1.00 42.02 C
ATOM 19 O6 G A 117 80.425 -28.702 3.662 1.00 42.90 O
ATOM 20 N1 G A 117 79.751 -26.635 4.366 1.00 42.10 N
ATOM 21 C2 G A 117 79.243 -25.376 4.119 1.00 42.65 C
ATOM 22 N2 G A 117 79.102 -24.574 5.181 1.00 42.30 N
ATOM 23 N3 G A 117 78.868 -24.936 2.923 1.00 41.21 N
ATOM 24 C4 G A 117 79.063 -25.871 1.961 1.00 41.25 C
ATOM 25 P U A 118 81.858 -22.358 -2.202 1.00 55.35 P
ATOM 26 OP1 U A 118 82.172 -21.185 -3.046 1.00 56.19 O
ATOM 27 OP2 U A 118 82.490 -23.664 -2.496 1.00 52.50 O
ATOM 28 O5' U A 118 82.149 -21.988 -0.672 1.00 57.14 O
TER
ATOM 1 O3' A B 115 77.369 -33.964 -2.398 1.00 48.20 O
ATOM 2 P A B 116 78.693 -33.064 -2.406 1.00 50.92 P
ATOM 3 OP1 A B 116 79.433 -33.453 -3.623 1.00 52.04 O
ATOM 4 OP2 A B 116 79.339 -33.144 -1.085 1.00 51.05 O
ATOM 5 O5' A B 116 78.158 -31.561 -2.544 1.00 48.21 O
ATOM 6 C5' A B 116 77.622 -31.097 -3.767 1.00 44.52 C
ATOM 7 C4' A B 116 76.835 -29.818 -3.568 1.00 42.88 C
ATOM 8 O4' A B 116 75.930 -29.961 -2.448 1.00 41.44 O
ATOM 9 C3' A B 116 77.640 -28.586 -3.191 1.00 42.98 C
ATOM 10 O3' A B 116 78.302 -28.000 -4.310 1.00 45.58 O
ATOM 11 C2' A B 116 76.531 -27.692 -2.663 1.00 40.35 C
ATOM 12 O2' A B 116 75.791 -27.074 -3.692 1.00 43.74 O
ATOM 13 C1' A B 116 75.673 -28.687 -1.895 1.00 38.31 C
ATOM 14 N9 A B 116 75.994 -28.695 -0.471 1.00 37.61 N
ATOM 15 C8 A B 116 76.619 -29.676 0.253 1.00 35.67 C
ATOM 16 N7 A B 116 76.761 -29.370 1.517 1.00 36.57 N
ATOM 17 C5 A B 116 76.197 -28.107 1.629 1.00 36.86 C
ATOM 18 C6 A B 116 76.027 -27.222 2.707 1.00 36.60 C
ATOM 19 N6 A B 116 76.437 -27.498 3.946 1.00 36.98 N
ATOM 20 N1 A B 116 75.424 -26.035 2.467 1.00 36.10 N
ATOM 21 C2 A B 116 75.010 -25.760 1.229 1.00 35.61 C
ATOM 22 N3 A B 116 75.117 -26.514 0.137 1.00 37.33 N
ATOM 23 C4 A B 116 75.721 -27.679 0.408 1.00 37.40 C
ATOM 24 P G B 117 79.728 -27.282 -4.147 1.00 48.33 P
ATOM 25 OP1 G B 117 80.078 -26.713 -5.462 1.00 47.94 O
ATOM 26 OP2 G B 117 80.648 -28.239 -3.488 1.00 43.67 O
ATOM 27 O5' G B 117 79.459 -26.087 -3.133 1.00 46.10 O
TER
ATOM 2 P G A 117 79.728 -27.282 -4.147 1.00 48.33 P
ATOM 3 OP1 G A 117 80.078 -26.713 -5.462 1.00 47.94 O
ATOM 4 OP2 G A 117 80.648 -28.239 -3.488 1.00 43.67 O
ATOM 5 O5' G A 117 79.459 -26.087 -3.133 1.00 46.10 O
ATOM 6 C5' G A 117 78.640 -25.000 -3.495 1.00 47.56 C
ATOM 7 C4' G A 117 78.416 -24.113 -2.287 1.00 47.87 C
ATOM 8 O4' G A 117 77.706 -24.865 -1.280 1.00 47.70 O
ATOM 9 C3' G A 117 79.678 -23.663 -1.565 1.00 49.04 C
ATOM 10 O3' G A 117 80.264 -22.524 -2.187 1.00 52.40 O
ATOM 11 C2' G A 117 79.141 -23.369 -0.173 1.00 46.33 C
ATOM 12 O2' G A 117 78.417 -22.164 -0.075 1.00 47.43 O
ATOM 13 C1' G A 117 78.197 -24.540 0.008 1.00 44.22 C
ATOM 14 N9 G A 117 78.784 -25.723 0.623 1.00 42.25 N
ATOM 15 C8 G A 117 79.134 -26.908 0.029 1.00 41.51 C
ATOM 16 N7 G A 117 79.612 -27.783 0.864 1.00 40.16 N
ATOM 17 C5 G A 117 79.568 -27.141 2.092 1.00 41.28 C
ATOM 18 C6 G A 117 79.960 -27.594 3.370 1.00 42.02 C
ATOM 19 O6 G A 117 80.425 -28.702 3.662 1.00 42.90 O
ATOM 20 N1 G A 117 79.751 -26.635 4.366 1.00 42.10 N
ATOM 21 C2 G A 117 79.243 -25.376 4.119 1.00 42.65 C
ATOM 22 N2 G A 117 79.102 -24.574 5.181 1.00 42.30 N
ATOM 23 N3 G A 117 78.868 -24.936 2.923 1.00 41.21 N
ATOM 24 C4 G A 117 79.063 -25.871 1.961 1.00 41.25 C
ATOM 25 P U A 118 81.858 -22.358 -2.202 1.00 55.35 P
ATOM 26 OP1 U A 118 82.172 -21.185 -3.046 1.00 56.19 O
ATOM 27 OP2 U A 118 82.490 -23.664 -2.496 1.00 52.50 O
ATOM 28 O5' U A 118 82.149 -21.988 -0.672 1.00 57.14 O
TER
ATOM 1 O3' A B 115 77.369 -33.964 -2.398 1.00 48.20 O
ATOM 2 P A B 116 78.693 -33.064 -2.406 1.00 50.92 P
ATOM 3 OP1 A B 116 79.433 -33.453 -3.623 1.00 52.04 O
ATOM 4 OP2 A B 116 79.339 -33.144 -1.085 1.00 51.05 O
ATOM 5 O5' A B 116 78.158 -31.561 -2.544 1.00 48.21 O
ATOM 6 C5' A B 116 77.622 -31.097 -3.767 1.00 44.52 C
ATOM 7 C4' A B 116 76.835 -29.818 -3.568 1.00 42.88 C
ATOM 8 O4' A B 116 75.930 -29.961 -2.448 1.00 41.44 O
ATOM 9 C3' A B 116 77.640 -28.586 -3.191 1.00 42.98 C
ATOM 10 O3' A B 116 78.302 -28.000 -4.310 1.00 45.58 O
ATOM 11 C2' A B 116 76.531 -27.692 -2.663 1.00 40.35 C
ATOM 12 O2' A B 116 75.791 -27.074 -3.692 1.00 43.74 O
ATOM 13 C1' A B 116 75.673 -28.687 -1.895 1.00 38.31 C
ATOM 14 N9 A B 116 75.994 -28.695 -0.471 1.00 37.61 N
ATOM 15 C8 A B 116 76.619 -29.676 0.253 1.00 35.67 C
ATOM 16 N7 A B 116 76.761 -29.370 1.517 1.00 36.57 N
ATOM 17 C5 A B 116 76.197 -28.107 1.629 1.00 36.86 C
ATOM 18 C6 A B 116 76.027 -27.222 2.707 1.00 36.60 C
ATOM 19 N6 A B 116 76.437 -27.498 3.946 1.00 36.98 N
ATOM 20 N1 A B 116 75.424 -26.035 2.467 1.00 36.10 N
ATOM 21 C2 A B 116 75.010 -25.760 1.229 1.00 35.61 C
ATOM 22 N3 A B 116 75.117 -26.514 0.137 1.00 37.33 N
ATOM 23 C4 A B 116 75.721 -27.679 0.408 1.00 37.40 C
ATOM 24 P G B 117 79.728 -27.282 -4.147 1.00 48.33 P
ATOM 25 OP1 G B 117 80.078 -26.713 -5.462 1.00 47.94 O
ATOM 26 OP2 G B 117 80.648 -28.239 -3.488 1.00 43.67 O
ATOM 27 O5' G B 117 79.459 -26.087 -3.133 1.00 46.10 O
TER
Atoms:
OP1: (80.078,-26.713,-5.462)
OP2: (80.648,-28.239,-3.488)
C3': (79.678,-23.663,-1.565)
C1': (78.197,-24.540,0.008)
C5': (78.640,-25.000,-3.495)
O6: (80.425,-28.702,3.662)
O4': (77.706,-24.865,-1.280)
C8: (79.134,-26.908,0.029)
C2: (79.243,-25.376,4.119)
C6: (79.960,-27.594,3.370)
C5: (79.568,-27.141,2.092)
C4: (79.063,-25.871,1.961)
P: (79.728,-27.282,-4.147)
C4': (78.416,-24.113,-2.287)
C2': (79.141,-23.369,-0.173)
O2': (78.417,-22.164,-0.075)
N1: (79.751,-26.635,4.366)
N2: (79.102,-24.574,5.181)
N3: (78.868,-24.936,2.923)
N7: (79.612,-27.783,0.864)
N9: (78.784,-25.723,0.623)
O5': (79.459,-26.087,-3.133)
O3': (80.264,-22.524,-2.187)
OP2: (80.648,-28.239,-3.488)
C3': (79.678,-23.663,-1.565)
C1': (78.197,-24.540,0.008)
C5': (78.640,-25.000,-3.495)
O6: (80.425,-28.702,3.662)
O4': (77.706,-24.865,-1.280)
C8: (79.134,-26.908,0.029)
C2: (79.243,-25.376,4.119)
C6: (79.960,-27.594,3.370)
C5: (79.568,-27.141,2.092)
C4: (79.063,-25.871,1.961)
P: (79.728,-27.282,-4.147)
C4': (78.416,-24.113,-2.287)
C2': (79.141,-23.369,-0.173)
O2': (78.417,-22.164,-0.075)
N1: (79.751,-26.635,4.366)
N2: (79.102,-24.574,5.181)
N3: (78.868,-24.936,2.923)
N7: (79.612,-27.783,0.864)
N9: (78.784,-25.723,0.623)
O5': (79.459,-26.087,-3.133)
O3': (80.264,-22.524,-2.187)
OP1: (79.433,-33.453,-3.623)
OP2: (79.339,-33.144,-1.085)
C3': (77.640,-28.586,-3.191)
C1': (75.673,-28.687,-1.895)
C5': (77.622,-31.097,-3.767)
O4': (75.930,-29.961,-2.448)
C8: (76.619,-29.676,0.253)
O2': (75.791,-27.074,-3.692)
C6: (76.027,-27.222,2.707)
C5: (76.197,-28.107,1.629)
C4: (75.721,-27.679,0.408)
P: (78.693,-33.064,-2.406)
C4': (76.835,-29.818,-3.568)
C2': (76.531,-27.692,-2.663)
C2: (75.010,-25.760,1.229)
N1: (75.424,-26.035,2.467)
N3: (75.117,-26.514,0.137)
N6: (76.437,-27.498,3.946)
N7: (76.761,-29.370,1.517)
N9: (75.994,-28.695,-0.471)
O5': (78.158,-31.561,-2.544)
O3': (78.302,-28.000,-4.310)
OP2: (79.339,-33.144,-1.085)
C3': (77.640,-28.586,-3.191)
C1': (75.673,-28.687,-1.895)
C5': (77.622,-31.097,-3.767)
O4': (75.930,-29.961,-2.448)
C8: (76.619,-29.676,0.253)
O2': (75.791,-27.074,-3.692)
C6: (76.027,-27.222,2.707)
C5: (76.197,-28.107,1.629)
C4: (75.721,-27.679,0.408)
P: (78.693,-33.064,-2.406)
C4': (76.835,-29.818,-3.568)
C2': (76.531,-27.692,-2.663)
C2: (75.010,-25.760,1.229)
N1: (75.424,-26.035,2.467)
N3: (75.117,-26.514,0.137)
N6: (76.437,-27.498,3.946)
N7: (76.761,-29.370,1.517)
N9: (75.994,-28.695,-0.471)
O5': (78.158,-31.561,-2.544)
O3': (78.302,-28.000,-4.310)
Image (generated by PyMOL):