Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0248:0249
Extra
PDB:
ATOM 1 O3' G A 247 94.622 134.868 4.806 1.00 62.41 O
ATOM 2 P C A 248 95.546 133.589 4.478 1.00 63.26 P
ATOM 3 OP1 C A 248 96.561 133.470 5.553 1.00 61.90 O
ATOM 4 OP2 C A 248 95.984 133.648 3.057 1.00 63.42 O
ATOM 5 O5' C A 248 94.543 132.362 4.587 1.00 62.37 O
ATOM 6 C5' C A 248 93.722 132.179 5.746 1.00 60.20 C
ATOM 7 C4' C A 248 92.755 131.048 5.515 1.00 58.97 C
ATOM 8 O4' C A 248 91.844 131.407 4.445 1.00 59.24 O
ATOM 9 C3' C A 248 93.364 129.737 5.047 1.00 57.51 C
ATOM 10 O3' C A 248 93.881 128.987 6.138 1.00 56.64 O
ATOM 11 C2' C A 248 92.164 129.052 4.411 1.00 59.33 C
ATOM 12 O2' C A 248 91.298 128.492 5.375 1.00 61.21 O
ATOM 13 C1' C A 248 91.454 130.236 3.750 1.00 59.60 C
ATOM 14 N1 C A 248 91.760 130.391 2.313 1.00 60.73 N
ATOM 15 C2 C A 248 91.141 129.525 1.414 1.00 60.87 C
ATOM 16 O2 C A 248 90.366 128.670 1.854 1.00 60.82 O
ATOM 17 N3 C A 248 91.400 129.641 0.089 1.00 60.90 N
ATOM 18 C4 C A 248 92.239 130.581 -0.346 1.00 60.14 C
ATOM 19 N4 C A 248 92.458 130.657 -1.659 1.00 59.36 N
ATOM 20 C5 C A 248 92.888 131.483 0.547 1.00 60.40 C
ATOM 21 C6 C A 248 92.623 131.354 1.857 1.00 61.34 C
ATOM 22 P A A 249 95.184 128.068 5.934 1.00 56.71 P
ATOM 23 OP1 A A 249 95.421 127.332 7.200 1.00 57.66 O
ATOM 24 OP2 A A 249 96.264 128.896 5.365 1.00 57.22 O
ATOM 25 O5' A A 249 94.741 127.014 4.831 1.00 57.77 O
TER
ATOM 1 O3' C B 248 93.881 128.987 6.138 1.00 56.64 O
ATOM 2 P A B 249 95.184 128.068 5.934 1.00 56.71 P
ATOM 3 OP1 A B 249 95.421 127.332 7.200 1.00 57.66 O
ATOM 4 OP2 A B 249 96.264 128.896 5.365 1.00 57.22 O
ATOM 5 O5' A B 249 94.741 127.014 4.831 1.00 57.77 O
ATOM 6 C5' A B 249 93.790 125.978 5.128 1.00 57.45 C
ATOM 7 C4' A B 249 93.523 125.163 3.890 1.00 57.71 C
ATOM 8 O4' A B 249 92.781 125.967 2.935 1.00 58.11 O
ATOM 9 C3' A B 249 94.777 124.743 3.140 1.00 57.39 C
ATOM 10 O3' A B 249 95.350 123.557 3.667 1.00 55.48 O
ATOM 11 C2' A B 249 94.257 124.548 1.728 1.00 59.31 C
ATOM 12 O2' A B 249 93.605 123.306 1.567 1.00 61.44 O
ATOM 13 C1' A B 249 93.251 125.699 1.621 1.00 60.41 C
ATOM 14 N9 A B 249 93.884 126.915 1.102 1.00 63.19 N
ATOM 15 C8 A B 249 94.405 127.970 1.813 1.00 63.74 C
ATOM 16 N7 A B 249 94.950 128.893 1.065 1.00 64.14 N
ATOM 17 C5 A B 249 94.769 128.423 -0.228 1.00 65.38 C
ATOM 18 C6 A B 249 95.134 128.942 -1.482 1.00 66.65 C
ATOM 19 N6 A B 249 95.799 130.089 -1.643 1.00 68.30 N
ATOM 20 N1 A B 249 94.797 128.231 -2.579 1.00 67.25 N
ATOM 21 C2 A B 249 94.148 127.073 -2.415 1.00 67.69 C
ATOM 22 N3 A B 249 93.759 126.476 -1.291 1.00 66.98 N
ATOM 23 C4 A B 249 94.103 127.213 -0.220 1.00 64.87 C
ATOM 24 P A B 250 96.917 123.514 4.006 1.00 56.17 P
ATOM 25 OP1 A B 250 97.065 123.441 5.476 1.00 56.31 O
ATOM 26 OP2 A B 250 97.569 124.612 3.263 1.00 57.35 O
ATOM 27 O5' A B 250 97.417 122.130 3.395 1.00 55.07 O
TER
ATOM 2 P C A 248 95.546 133.589 4.478 1.00 63.26 P
ATOM 3 OP1 C A 248 96.561 133.470 5.553 1.00 61.90 O
ATOM 4 OP2 C A 248 95.984 133.648 3.057 1.00 63.42 O
ATOM 5 O5' C A 248 94.543 132.362 4.587 1.00 62.37 O
ATOM 6 C5' C A 248 93.722 132.179 5.746 1.00 60.20 C
ATOM 7 C4' C A 248 92.755 131.048 5.515 1.00 58.97 C
ATOM 8 O4' C A 248 91.844 131.407 4.445 1.00 59.24 O
ATOM 9 C3' C A 248 93.364 129.737 5.047 1.00 57.51 C
ATOM 10 O3' C A 248 93.881 128.987 6.138 1.00 56.64 O
ATOM 11 C2' C A 248 92.164 129.052 4.411 1.00 59.33 C
ATOM 12 O2' C A 248 91.298 128.492 5.375 1.00 61.21 O
ATOM 13 C1' C A 248 91.454 130.236 3.750 1.00 59.60 C
ATOM 14 N1 C A 248 91.760 130.391 2.313 1.00 60.73 N
ATOM 15 C2 C A 248 91.141 129.525 1.414 1.00 60.87 C
ATOM 16 O2 C A 248 90.366 128.670 1.854 1.00 60.82 O
ATOM 17 N3 C A 248 91.400 129.641 0.089 1.00 60.90 N
ATOM 18 C4 C A 248 92.239 130.581 -0.346 1.00 60.14 C
ATOM 19 N4 C A 248 92.458 130.657 -1.659 1.00 59.36 N
ATOM 20 C5 C A 248 92.888 131.483 0.547 1.00 60.40 C
ATOM 21 C6 C A 248 92.623 131.354 1.857 1.00 61.34 C
ATOM 22 P A A 249 95.184 128.068 5.934 1.00 56.71 P
ATOM 23 OP1 A A 249 95.421 127.332 7.200 1.00 57.66 O
ATOM 24 OP2 A A 249 96.264 128.896 5.365 1.00 57.22 O
ATOM 25 O5' A A 249 94.741 127.014 4.831 1.00 57.77 O
TER
ATOM 1 O3' C B 248 93.881 128.987 6.138 1.00 56.64 O
ATOM 2 P A B 249 95.184 128.068 5.934 1.00 56.71 P
ATOM 3 OP1 A B 249 95.421 127.332 7.200 1.00 57.66 O
ATOM 4 OP2 A B 249 96.264 128.896 5.365 1.00 57.22 O
ATOM 5 O5' A B 249 94.741 127.014 4.831 1.00 57.77 O
ATOM 6 C5' A B 249 93.790 125.978 5.128 1.00 57.45 C
ATOM 7 C4' A B 249 93.523 125.163 3.890 1.00 57.71 C
ATOM 8 O4' A B 249 92.781 125.967 2.935 1.00 58.11 O
ATOM 9 C3' A B 249 94.777 124.743 3.140 1.00 57.39 C
ATOM 10 O3' A B 249 95.350 123.557 3.667 1.00 55.48 O
ATOM 11 C2' A B 249 94.257 124.548 1.728 1.00 59.31 C
ATOM 12 O2' A B 249 93.605 123.306 1.567 1.00 61.44 O
ATOM 13 C1' A B 249 93.251 125.699 1.621 1.00 60.41 C
ATOM 14 N9 A B 249 93.884 126.915 1.102 1.00 63.19 N
ATOM 15 C8 A B 249 94.405 127.970 1.813 1.00 63.74 C
ATOM 16 N7 A B 249 94.950 128.893 1.065 1.00 64.14 N
ATOM 17 C5 A B 249 94.769 128.423 -0.228 1.00 65.38 C
ATOM 18 C6 A B 249 95.134 128.942 -1.482 1.00 66.65 C
ATOM 19 N6 A B 249 95.799 130.089 -1.643 1.00 68.30 N
ATOM 20 N1 A B 249 94.797 128.231 -2.579 1.00 67.25 N
ATOM 21 C2 A B 249 94.148 127.073 -2.415 1.00 67.69 C
ATOM 22 N3 A B 249 93.759 126.476 -1.291 1.00 66.98 N
ATOM 23 C4 A B 249 94.103 127.213 -0.220 1.00 64.87 C
ATOM 24 P A B 250 96.917 123.514 4.006 1.00 56.17 P
ATOM 25 OP1 A B 250 97.065 123.441 5.476 1.00 56.31 O
ATOM 26 OP2 A B 250 97.569 124.612 3.263 1.00 57.35 O
ATOM 27 O5' A B 250 97.417 122.130 3.395 1.00 55.07 O
TER
Atoms:
C2: (91.141,129.525,1.414)
OP1: (96.561,133.470,5.553)
OP2: (95.984,133.648,3.057)
C4: (92.239,130.581,-0.346)
O5': (94.543,132.362,4.587)
C3': (93.364,129.737,5.047)
C1': (91.454,130.236,3.750)
O4': (91.844,131.407,4.445)
C5': (93.722,132.179,5.746)
P: (95.546,133.589,4.478)
O2: (90.366,128.670,1.854)
C4': (92.755,131.048,5.515)
C2': (92.164,129.052,4.411)
O2': (91.298,128.492,5.375)
N1: (91.760,130.391,2.313)
N3: (91.400,129.641,0.089)
N4: (92.458,130.657,-1.659)
C6: (92.623,131.354,1.857)
C5: (92.888,131.483,0.547)
O3': (93.881,128.987,6.138)
OP1: (96.561,133.470,5.553)
OP2: (95.984,133.648,3.057)
C4: (92.239,130.581,-0.346)
O5': (94.543,132.362,4.587)
C3': (93.364,129.737,5.047)
C1': (91.454,130.236,3.750)
O4': (91.844,131.407,4.445)
C5': (93.722,132.179,5.746)
P: (95.546,133.589,4.478)
O2: (90.366,128.670,1.854)
C4': (92.755,131.048,5.515)
C2': (92.164,129.052,4.411)
O2': (91.298,128.492,5.375)
N1: (91.760,130.391,2.313)
N3: (91.400,129.641,0.089)
N4: (92.458,130.657,-1.659)
C6: (92.623,131.354,1.857)
C5: (92.888,131.483,0.547)
O3': (93.881,128.987,6.138)
OP1: (95.421,127.332,7.200)
OP2: (96.264,128.896,5.365)
C3': (94.777,124.743,3.140)
C1': (93.251,125.699,1.621)
C5': (93.790,125.978,5.128)
O4': (92.781,125.967,2.935)
C8: (94.405,127.970,1.813)
O2': (93.605,123.306,1.567)
C6: (95.134,128.942,-1.482)
C5: (94.769,128.423,-0.228)
C4: (94.103,127.213,-0.220)
P: (95.184,128.068,5.934)
C4': (93.523,125.163,3.890)
C2': (94.257,124.548,1.728)
C2: (94.148,127.073,-2.415)
N1: (94.797,128.231,-2.579)
N3: (93.759,126.476,-1.291)
N6: (95.799,130.089,-1.643)
N7: (94.950,128.893,1.065)
N9: (93.884,126.915,1.102)
O5': (94.741,127.014,4.831)
O3': (95.350,123.557,3.667)
OP2: (96.264,128.896,5.365)
C3': (94.777,124.743,3.140)
C1': (93.251,125.699,1.621)
C5': (93.790,125.978,5.128)
O4': (92.781,125.967,2.935)
C8: (94.405,127.970,1.813)
O2': (93.605,123.306,1.567)
C6: (95.134,128.942,-1.482)
C5: (94.769,128.423,-0.228)
C4: (94.103,127.213,-0.220)
P: (95.184,128.068,5.934)
C4': (93.523,125.163,3.890)
C2': (94.257,124.548,1.728)
C2: (94.148,127.073,-2.415)
N1: (94.797,128.231,-2.579)
N3: (93.759,126.476,-1.291)
N6: (95.799,130.089,-1.643)
N7: (94.950,128.893,1.065)
N9: (93.884,126.915,1.102)
O5': (94.741,127.014,4.831)
O3': (95.350,123.557,3.667)
Image (generated by PyMOL):