ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIM:A85:A84

Extra

PDB:
ATOM 1 O3' G A 84 16.563 26.586 5.291 1.00 25.80 O
ATOM 2 P U A 85 15.001 26.896 5.097 1.00 24.75 P
ATOM 3 OP1 U A 85 14.892 27.942 4.057 1.00 24.51 O
ATOM 4 OP2 U A 85 14.397 27.106 6.436 1.00 24.58 O
ATOM 5 O5' U A 85 14.395 25.518 4.554 1.00 24.44 O
ATOM 6 C5' U A 85 14.717 24.990 3.278 1.00 25.21 C
ATOM 7 C4' U A 85 14.132 23.593 3.136 1.00 25.76 C
ATOM 8 O4' U A 85 14.783 22.667 4.051 1.00 25.64 O
ATOM 9 C3' U A 85 12.659 23.476 3.498 1.00 25.71 C
ATOM 10 O3' U A 85 11.836 23.868 2.439 1.00 26.55 O
ATOM 11 C2' U A 85 12.534 21.984 3.759 1.00 26.12 C
ATOM 12 O2' U A 85 12.461 21.213 2.570 1.00 25.40 O
ATOM 13 C1' U A 85 13.823 21.752 4.554 1.00 25.72 C
ATOM 14 N1 U A 85 13.602 21.953 6.033 1.00 25.67 N
ATOM 15 C2 U A 85 12.990 20.942 6.760 1.00 25.64 C
ATOM 16 O2 U A 85 12.628 19.885 6.273 1.00 25.44 O
ATOM 17 N3 U A 85 12.813 21.206 8.100 1.00 25.76 N
ATOM 18 C4 U A 85 13.169 22.356 8.779 1.00 26.05 C
ATOM 19 O4 U A 85 12.947 22.440 9.987 1.00 26.85 O
ATOM 20 C5 U A 85 13.796 23.369 7.959 1.00 25.94 C
ATOM 21 C6 U A 85 13.981 23.137 6.652 1.00 25.59 C
ATOM 22 P G A 86 10.430 24.554 2.762 1.00 27.63 P
ATOM 23 OP1 G A 86 9.943 25.178 1.507 1.00 27.87 O
ATOM 24 OP2 G A 86 10.570 25.384 3.978 1.00 26.18 O
ATOM 25 O5' G A 86 9.511 23.289 3.113 1.00 27.43 O
TER

ATOM 1 O3' G B 83 18.596 27.679 10.938 1.00 25.11 O
ATOM 2 P G B 84 17.085 27.737 10.422 1.00 25.96 P
ATOM 3 OP1 G B 84 16.725 29.156 10.196 1.00 26.20 O
ATOM 4 OP2 G B 84 16.280 26.923 11.354 1.00 25.87 O
ATOM 5 O5' G B 84 17.131 26.962 9.019 1.00 26.09 O
ATOM 6 C5' G B 84 18.034 27.341 7.978 1.00 25.78 C
ATOM 7 C4' G B 84 18.252 26.204 6.994 1.00 25.95 C
ATOM 8 O4' G B 84 18.764 25.017 7.655 1.00 26.49 O
ATOM 9 C3' G B 84 16.995 25.690 6.318 1.00 26.19 C
ATOM 10 O3' G B 84 16.563 26.586 5.291 1.00 25.80 O
ATOM 11 C2' G B 84 17.481 24.336 5.796 1.00 26.78 C
ATOM 12 O2' G B 84 18.264 24.421 4.615 1.00 25.65 O
ATOM 13 C1' G B 84 18.311 23.850 6.986 1.00 27.03 C
ATOM 14 N9 G B 84 17.563 23.041 7.950 1.00 28.15 N
ATOM 15 C8 G B 84 17.307 23.392 9.253 1.00 29.08 C
ATOM 16 N7 G B 84 16.622 22.504 9.925 1.00 29.19 N
ATOM 17 C5 G B 84 16.398 21.489 9.014 1.00 28.24 C
ATOM 18 C6 G B 84 15.699 20.275 9.185 1.00 27.30 C
ATOM 19 O6 G B 84 15.139 19.863 10.204 1.00 27.40 O
ATOM 20 N1 G B 84 15.680 19.515 8.027 1.00 26.89 N
ATOM 21 C2 G B 84 16.272 19.889 6.849 1.00 27.63 C
ATOM 22 N2 G B 84 16.164 19.022 5.837 1.00 27.85 N
ATOM 23 N3 G B 84 16.936 21.028 6.668 1.00 28.81 N
ATOM 24 C4 G B 84 16.966 21.795 7.791 1.00 28.71 C
ATOM 25 P U B 85 15.001 26.896 5.097 1.00 24.75 P
ATOM 26 OP1 U B 85 14.892 27.942 4.057 1.00 24.51 O
ATOM 27 OP2 U B 85 14.397 27.106 6.436 1.00 24.58 O
ATOM 28 O5' U B 85 14.395 25.518 4.554 1.00 24.44 O
TER

Atoms:
C4: (13.169,22.356,8.779)
N3: (12.813,21.206,8.100)
OP1: (14.892,27.942,4.057)
OP2: (14.397,27.106,6.436)
C2: (12.990,20.942,6.760)
C1': (13.823,21.752,4.554)
C3': (12.659,23.476,3.498)
O5': (14.395,25.518,4.554)
O4': (14.783,22.667,4.051)
C5': (14.717,24.990,3.278)
P: (15.001,26.896,5.097)
C4': (14.132,23.593,3.136)
C2': (12.534,21.984,3.759)
O2': (12.461,21.213,2.570)
N1: (13.602,21.953,6.033)
O4: (12.947,22.440,9.987)
O2: (12.628,19.885,6.273)
C6: (13.981,23.137,6.652)
C5: (13.796,23.369,7.959)
O3': (11.836,23.868,2.439)
OP1: (16.725,29.156,10.196)
OP2: (16.280,26.923,11.354)
C3': (16.995,25.690,6.318)
C1': (18.311,23.850,6.986)
C5': (18.034,27.341,7.978)
O6: (15.139,19.863,10.204)
O4': (18.764,25.017,7.655)
C8: (17.307,23.392,9.253)
C2: (16.272,19.889,6.849)
C6: (15.699,20.275,9.185)
C5: (16.398,21.489,9.014)
C4: (16.966,21.795,7.791)
P: (17.085,27.737,10.422)
C4': (18.252,26.204,6.994)
C2': (17.481,24.336,5.796)
O2': (18.264,24.421,4.615)
N1: (15.680,19.515,8.027)
N2: (16.164,19.022,5.837)
N3: (16.936,21.028,6.668)
N7: (16.622,22.504,9.925)
N9: (17.563,23.041,7.950)
O5': (17.131,26.962,9.019)
O3': (16.563,26.586,5.291)
Image (generated by PyMOL):
PyMOL image
show in jmol