Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0428:0429
Extra
PDB:
ATOM 1 O3' A A 427 56.695 116.162 35.253 1.00 39.74 O
ATOM 2 P C A 428 55.469 117.065 35.756 1.00 39.75 P
ATOM 3 OP1 C A 428 55.182 116.633 37.145 1.00 39.02 O
ATOM 4 OP2 C A 428 54.399 117.024 34.733 1.00 40.89 O
ATOM 5 O5' C A 428 56.052 118.546 35.808 1.00 41.51 O
ATOM 6 C5' C A 428 57.108 118.901 36.728 1.00 42.54 C
ATOM 7 C4' C A 428 57.539 120.326 36.495 1.00 44.23 C
ATOM 8 O4' C A 428 58.018 120.456 35.135 1.00 45.15 O
ATOM 9 C3' C A 428 56.435 121.366 36.628 1.00 44.95 C
ATOM 10 O3' C A 428 56.359 121.794 37.986 1.00 46.39 O
ATOM 11 C2' C A 428 56.921 122.492 35.728 1.00 44.78 C
ATOM 12 O2' C A 428 57.854 123.331 36.376 1.00 44.75 O
ATOM 13 C1' C A 428 57.633 121.715 34.617 1.00 44.55 C
ATOM 14 N1 C A 428 56.845 121.491 33.398 1.00 44.04 N
ATOM 15 C2 C A 428 56.809 122.489 32.424 1.00 45.03 C
ATOM 16 O2 C A 428 57.414 123.548 32.620 1.00 45.00 O
ATOM 17 N3 C A 428 56.122 122.275 31.288 1.00 46.61 N
ATOM 18 C4 C A 428 55.491 121.119 31.101 1.00 45.86 C
ATOM 19 N4 C A 428 54.850 120.941 29.947 1.00 47.97 N
ATOM 20 C5 C A 428 55.494 120.093 32.083 1.00 45.26 C
ATOM 21 C6 C A 428 56.173 120.320 33.207 1.00 43.83 C
ATOM 22 P A A 429 54.951 122.226 38.624 1.00 47.89 P
ATOM 23 OP1 A A 429 55.197 122.379 40.088 1.00 46.32 O
ATOM 24 OP2 A A 429 53.889 121.300 38.147 1.00 46.54 O
ATOM 25 O5' A A 429 54.677 123.671 38.017 1.00 47.29 O
TER
ATOM 1 O3' C B 428 56.359 121.794 37.986 1.00 46.39 O
ATOM 2 P A B 429 54.951 122.226 38.624 1.00 47.89 P
ATOM 3 OP1 A B 429 55.197 122.379 40.088 1.00 46.32 O
ATOM 4 OP2 A B 429 53.889 121.300 38.147 1.00 46.54 O
ATOM 5 O5' A B 429 54.677 123.671 38.017 1.00 47.29 O
ATOM 6 C5' A B 429 55.631 124.731 38.200 1.00 49.70 C
ATOM 7 C4' A B 429 55.325 125.875 37.268 1.00 50.57 C
ATOM 8 O4' A B 429 55.327 125.377 35.902 1.00 51.99 O
ATOM 9 C3' A B 429 53.974 126.546 37.466 1.00 50.89 C
ATOM 10 O3' A B 429 54.087 127.922 37.137 1.00 50.84 O
ATOM 11 C2' A B 429 53.073 125.792 36.491 1.00 50.60 C
ATOM 12 O2' A B 429 51.981 126.550 36.019 1.00 48.78 O
ATOM 13 C1' A B 429 54.030 125.476 35.344 1.00 51.71 C
ATOM 14 N9 A B 429 53.705 124.188 34.728 1.00 55.39 N
ATOM 15 C8 A B 429 53.708 122.947 35.327 1.00 55.88 C
ATOM 16 N7 A B 429 53.329 121.974 34.534 1.00 56.93 N
ATOM 17 C5 A B 429 53.064 122.612 33.329 1.00 57.08 C
ATOM 18 C6 A B 429 52.609 122.136 32.093 1.00 56.43 C
ATOM 19 N6 A B 429 52.307 120.859 31.862 1.00 56.25 N
ATOM 20 N1 A B 429 52.464 123.028 31.090 1.00 56.99 N
ATOM 21 C2 A B 429 52.752 124.312 31.327 1.00 56.57 C
ATOM 22 N3 A B 429 53.174 124.887 32.450 1.00 56.91 N
ATOM 23 C4 A B 429 53.310 123.973 33.428 1.00 56.99 C
ATOM 24 P A B 430 53.378 129.021 38.066 1.00 49.78 P
ATOM 25 OP1 A B 430 53.977 128.918 39.419 1.00 50.73 O
ATOM 26 OP2 A B 430 51.916 128.879 37.906 1.00 50.07 O
ATOM 27 O5' A B 430 53.818 130.400 37.403 1.00 48.96 O
TER
ATOM 2 P C A 428 55.469 117.065 35.756 1.00 39.75 P
ATOM 3 OP1 C A 428 55.182 116.633 37.145 1.00 39.02 O
ATOM 4 OP2 C A 428 54.399 117.024 34.733 1.00 40.89 O
ATOM 5 O5' C A 428 56.052 118.546 35.808 1.00 41.51 O
ATOM 6 C5' C A 428 57.108 118.901 36.728 1.00 42.54 C
ATOM 7 C4' C A 428 57.539 120.326 36.495 1.00 44.23 C
ATOM 8 O4' C A 428 58.018 120.456 35.135 1.00 45.15 O
ATOM 9 C3' C A 428 56.435 121.366 36.628 1.00 44.95 C
ATOM 10 O3' C A 428 56.359 121.794 37.986 1.00 46.39 O
ATOM 11 C2' C A 428 56.921 122.492 35.728 1.00 44.78 C
ATOM 12 O2' C A 428 57.854 123.331 36.376 1.00 44.75 O
ATOM 13 C1' C A 428 57.633 121.715 34.617 1.00 44.55 C
ATOM 14 N1 C A 428 56.845 121.491 33.398 1.00 44.04 N
ATOM 15 C2 C A 428 56.809 122.489 32.424 1.00 45.03 C
ATOM 16 O2 C A 428 57.414 123.548 32.620 1.00 45.00 O
ATOM 17 N3 C A 428 56.122 122.275 31.288 1.00 46.61 N
ATOM 18 C4 C A 428 55.491 121.119 31.101 1.00 45.86 C
ATOM 19 N4 C A 428 54.850 120.941 29.947 1.00 47.97 N
ATOM 20 C5 C A 428 55.494 120.093 32.083 1.00 45.26 C
ATOM 21 C6 C A 428 56.173 120.320 33.207 1.00 43.83 C
ATOM 22 P A A 429 54.951 122.226 38.624 1.00 47.89 P
ATOM 23 OP1 A A 429 55.197 122.379 40.088 1.00 46.32 O
ATOM 24 OP2 A A 429 53.889 121.300 38.147 1.00 46.54 O
ATOM 25 O5' A A 429 54.677 123.671 38.017 1.00 47.29 O
TER
ATOM 1 O3' C B 428 56.359 121.794 37.986 1.00 46.39 O
ATOM 2 P A B 429 54.951 122.226 38.624 1.00 47.89 P
ATOM 3 OP1 A B 429 55.197 122.379 40.088 1.00 46.32 O
ATOM 4 OP2 A B 429 53.889 121.300 38.147 1.00 46.54 O
ATOM 5 O5' A B 429 54.677 123.671 38.017 1.00 47.29 O
ATOM 6 C5' A B 429 55.631 124.731 38.200 1.00 49.70 C
ATOM 7 C4' A B 429 55.325 125.875 37.268 1.00 50.57 C
ATOM 8 O4' A B 429 55.327 125.377 35.902 1.00 51.99 O
ATOM 9 C3' A B 429 53.974 126.546 37.466 1.00 50.89 C
ATOM 10 O3' A B 429 54.087 127.922 37.137 1.00 50.84 O
ATOM 11 C2' A B 429 53.073 125.792 36.491 1.00 50.60 C
ATOM 12 O2' A B 429 51.981 126.550 36.019 1.00 48.78 O
ATOM 13 C1' A B 429 54.030 125.476 35.344 1.00 51.71 C
ATOM 14 N9 A B 429 53.705 124.188 34.728 1.00 55.39 N
ATOM 15 C8 A B 429 53.708 122.947 35.327 1.00 55.88 C
ATOM 16 N7 A B 429 53.329 121.974 34.534 1.00 56.93 N
ATOM 17 C5 A B 429 53.064 122.612 33.329 1.00 57.08 C
ATOM 18 C6 A B 429 52.609 122.136 32.093 1.00 56.43 C
ATOM 19 N6 A B 429 52.307 120.859 31.862 1.00 56.25 N
ATOM 20 N1 A B 429 52.464 123.028 31.090 1.00 56.99 N
ATOM 21 C2 A B 429 52.752 124.312 31.327 1.00 56.57 C
ATOM 22 N3 A B 429 53.174 124.887 32.450 1.00 56.91 N
ATOM 23 C4 A B 429 53.310 123.973 33.428 1.00 56.99 C
ATOM 24 P A B 430 53.378 129.021 38.066 1.00 49.78 P
ATOM 25 OP1 A B 430 53.977 128.918 39.419 1.00 50.73 O
ATOM 26 OP2 A B 430 51.916 128.879 37.906 1.00 50.07 O
ATOM 27 O5' A B 430 53.818 130.400 37.403 1.00 48.96 O
TER
Atoms:
C2: (56.809,122.489,32.424)
OP1: (55.182,116.633,37.145)
OP2: (54.399,117.024,34.733)
C4: (55.491,121.119,31.101)
O5': (56.052,118.546,35.808)
C3': (56.435,121.366,36.628)
C1': (57.633,121.715,34.617)
O4': (58.018,120.456,35.135)
C5': (57.108,118.901,36.728)
P: (55.469,117.065,35.756)
O2: (57.414,123.548,32.620)
C4': (57.539,120.326,36.495)
C2': (56.921,122.492,35.728)
O2': (57.854,123.331,36.376)
N1: (56.845,121.491,33.398)
N3: (56.122,122.275,31.288)
N4: (54.850,120.941,29.947)
C6: (56.173,120.320,33.207)
C5: (55.494,120.093,32.083)
O3': (56.359,121.794,37.986)
OP1: (55.182,116.633,37.145)
OP2: (54.399,117.024,34.733)
C4: (55.491,121.119,31.101)
O5': (56.052,118.546,35.808)
C3': (56.435,121.366,36.628)
C1': (57.633,121.715,34.617)
O4': (58.018,120.456,35.135)
C5': (57.108,118.901,36.728)
P: (55.469,117.065,35.756)
O2: (57.414,123.548,32.620)
C4': (57.539,120.326,36.495)
C2': (56.921,122.492,35.728)
O2': (57.854,123.331,36.376)
N1: (56.845,121.491,33.398)
N3: (56.122,122.275,31.288)
N4: (54.850,120.941,29.947)
C6: (56.173,120.320,33.207)
C5: (55.494,120.093,32.083)
O3': (56.359,121.794,37.986)
OP1: (55.197,122.379,40.088)
OP2: (53.889,121.300,38.147)
C3': (53.974,126.546,37.466)
C1': (54.030,125.476,35.344)
C5': (55.631,124.731,38.200)
O4': (55.327,125.377,35.902)
C8: (53.708,122.947,35.327)
O2': (51.981,126.550,36.019)
C6: (52.609,122.136,32.093)
C5: (53.064,122.612,33.329)
C4: (53.310,123.973,33.428)
P: (54.951,122.226,38.624)
C4': (55.325,125.875,37.268)
C2': (53.073,125.792,36.491)
C2: (52.752,124.312,31.327)
N1: (52.464,123.028,31.090)
N3: (53.174,124.887,32.450)
N6: (52.307,120.859,31.862)
N7: (53.329,121.974,34.534)
N9: (53.705,124.188,34.728)
O5': (54.677,123.671,38.017)
O3': (54.087,127.922,37.137)
OP2: (53.889,121.300,38.147)
C3': (53.974,126.546,37.466)
C1': (54.030,125.476,35.344)
C5': (55.631,124.731,38.200)
O4': (55.327,125.377,35.902)
C8: (53.708,122.947,35.327)
O2': (51.981,126.550,36.019)
C6: (52.609,122.136,32.093)
C5: (53.064,122.612,33.329)
C4: (53.310,123.973,33.428)
P: (54.951,122.226,38.624)
C4': (55.325,125.875,37.268)
C2': (53.073,125.792,36.491)
C2: (52.752,124.312,31.327)
N1: (52.464,123.028,31.090)
N3: (53.174,124.887,32.450)
N6: (52.307,120.859,31.862)
N7: (53.329,121.974,34.534)
N9: (53.705,124.188,34.728)
O5': (54.677,123.671,38.017)
O3': (54.087,127.922,37.137)
Image (generated by PyMOL):