Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0308:0307
Extra
PDB:
ATOM 1 O3' A A 307 6.736 133.840 45.360 1.00 67.44 O
ATOM 2 P G A 308 5.696 133.019 44.452 1.00 69.62 P
ATOM 3 OP1 G A 308 5.926 131.568 44.689 1.00 68.63 O
ATOM 4 OP2 G A 308 5.764 133.550 43.063 1.00 69.68 O
ATOM 5 O5' G A 308 4.287 133.428 45.069 1.00 68.33 O
ATOM 6 C5' G A 308 3.866 132.920 46.344 1.00 67.94 C
ATOM 7 C4' G A 308 2.464 133.383 46.645 1.00 70.09 C
ATOM 8 O4' G A 308 2.461 134.825 46.805 1.00 69.94 O
ATOM 9 C3' G A 308 1.442 133.120 45.550 1.00 71.01 C
ATOM 10 O3' G A 308 0.931 131.792 45.626 1.00 72.87 O
ATOM 11 C2' G A 308 0.392 134.184 45.834 1.00 70.51 C
ATOM 12 O2' G A 308 -0.442 133.841 46.923 1.00 71.72 O
ATOM 13 C1' G A 308 1.276 135.366 46.244 1.00 69.78 C
ATOM 14 N9 G A 308 1.660 136.214 45.119 1.00 68.46 N
ATOM 15 C8 G A 308 2.804 136.117 44.358 1.00 67.71 C
ATOM 16 N7 G A 308 2.868 137.012 43.412 1.00 66.64 N
ATOM 17 C5 G A 308 1.698 137.745 43.552 1.00 66.46 C
ATOM 18 C6 G A 308 1.206 138.839 42.800 1.00 66.12 C
ATOM 19 O6 G A 308 1.726 139.399 41.826 1.00 64.52 O
ATOM 20 N1 G A 308 -0.025 139.277 43.282 1.00 66.53 N
ATOM 21 C2 G A 308 -0.699 138.732 44.351 1.00 65.78 C
ATOM 22 N2 G A 308 -1.873 139.295 44.664 1.00 64.76 N
ATOM 23 N3 G A 308 -0.251 137.711 45.058 1.00 66.54 N
ATOM 24 C4 G A 308 0.944 137.268 44.606 1.00 67.22 C
ATOM 25 P A A 309 0.436 131.049 44.289 1.00 74.15 P
ATOM 26 OP1 A A 309 -0.065 129.709 44.705 1.00 73.40 O
ATOM 27 OP2 A A 309 1.504 131.142 43.257 1.00 72.70 O
ATOM 28 O5' A A 309 -0.797 131.938 43.810 1.00 73.37 O
TER
ATOM 1 O3' U B 306 9.567 138.182 42.068 1.00 71.54 O
ATOM 2 P A B 307 9.191 136.626 41.766 1.00 69.88 P
ATOM 3 OP1 A B 307 10.365 135.747 41.589 1.00 70.03 O
ATOM 4 OP2 A B 307 8.161 136.659 40.704 1.00 71.58 O
ATOM 5 O5' A B 307 8.430 136.169 43.087 1.00 67.84 O
ATOM 6 C5' A B 307 9.131 135.663 44.238 1.00 63.89 C
ATOM 7 C4' A B 307 8.237 135.748 45.453 1.00 63.18 C
ATOM 8 O4' A B 307 8.068 137.137 45.832 1.00 63.71 O
ATOM 9 C3' A B 307 6.824 135.249 45.218 1.00 64.26 C
ATOM 10 O3' A B 307 6.736 133.840 45.360 1.00 67.44 O
ATOM 11 C2' A B 307 6.015 136.019 46.248 1.00 63.15 C
ATOM 12 O2' A B 307 6.114 135.459 47.539 1.00 65.35 O
ATOM 13 C1' A B 307 6.726 137.373 46.231 1.00 62.43 C
ATOM 14 N9 A B 307 6.151 138.361 45.311 1.00 61.64 N
ATOM 15 C8 A B 307 6.705 138.810 44.136 1.00 60.81 C
ATOM 16 N7 A B 307 5.993 139.727 43.530 1.00 60.96 N
ATOM 17 C5 A B 307 4.888 139.889 44.352 1.00 60.30 C
ATOM 18 C6 A B 307 3.756 140.724 44.261 1.00 60.13 C
ATOM 19 N6 A B 307 3.545 141.585 43.260 1.00 57.77 N
ATOM 20 N1 A B 307 2.837 140.641 45.246 1.00 59.50 N
ATOM 21 C2 A B 307 3.046 139.775 46.246 1.00 59.80 C
ATOM 22 N3 A B 307 4.066 138.940 46.442 1.00 61.05 N
ATOM 23 C4 A B 307 4.965 139.048 45.449 1.00 60.83 C
ATOM 24 P G B 308 5.696 133.019 44.452 1.00 69.62 P
ATOM 25 OP1 G B 308 5.926 131.568 44.689 1.00 68.63 O
ATOM 26 OP2 G B 308 5.764 133.550 43.063 1.00 69.68 O
ATOM 27 O5' G B 308 4.287 133.428 45.069 1.00 68.33 O
TER
ATOM 2 P G A 308 5.696 133.019 44.452 1.00 69.62 P
ATOM 3 OP1 G A 308 5.926 131.568 44.689 1.00 68.63 O
ATOM 4 OP2 G A 308 5.764 133.550 43.063 1.00 69.68 O
ATOM 5 O5' G A 308 4.287 133.428 45.069 1.00 68.33 O
ATOM 6 C5' G A 308 3.866 132.920 46.344 1.00 67.94 C
ATOM 7 C4' G A 308 2.464 133.383 46.645 1.00 70.09 C
ATOM 8 O4' G A 308 2.461 134.825 46.805 1.00 69.94 O
ATOM 9 C3' G A 308 1.442 133.120 45.550 1.00 71.01 C
ATOM 10 O3' G A 308 0.931 131.792 45.626 1.00 72.87 O
ATOM 11 C2' G A 308 0.392 134.184 45.834 1.00 70.51 C
ATOM 12 O2' G A 308 -0.442 133.841 46.923 1.00 71.72 O
ATOM 13 C1' G A 308 1.276 135.366 46.244 1.00 69.78 C
ATOM 14 N9 G A 308 1.660 136.214 45.119 1.00 68.46 N
ATOM 15 C8 G A 308 2.804 136.117 44.358 1.00 67.71 C
ATOM 16 N7 G A 308 2.868 137.012 43.412 1.00 66.64 N
ATOM 17 C5 G A 308 1.698 137.745 43.552 1.00 66.46 C
ATOM 18 C6 G A 308 1.206 138.839 42.800 1.00 66.12 C
ATOM 19 O6 G A 308 1.726 139.399 41.826 1.00 64.52 O
ATOM 20 N1 G A 308 -0.025 139.277 43.282 1.00 66.53 N
ATOM 21 C2 G A 308 -0.699 138.732 44.351 1.00 65.78 C
ATOM 22 N2 G A 308 -1.873 139.295 44.664 1.00 64.76 N
ATOM 23 N3 G A 308 -0.251 137.711 45.058 1.00 66.54 N
ATOM 24 C4 G A 308 0.944 137.268 44.606 1.00 67.22 C
ATOM 25 P A A 309 0.436 131.049 44.289 1.00 74.15 P
ATOM 26 OP1 A A 309 -0.065 129.709 44.705 1.00 73.40 O
ATOM 27 OP2 A A 309 1.504 131.142 43.257 1.00 72.70 O
ATOM 28 O5' A A 309 -0.797 131.938 43.810 1.00 73.37 O
TER
ATOM 1 O3' U B 306 9.567 138.182 42.068 1.00 71.54 O
ATOM 2 P A B 307 9.191 136.626 41.766 1.00 69.88 P
ATOM 3 OP1 A B 307 10.365 135.747 41.589 1.00 70.03 O
ATOM 4 OP2 A B 307 8.161 136.659 40.704 1.00 71.58 O
ATOM 5 O5' A B 307 8.430 136.169 43.087 1.00 67.84 O
ATOM 6 C5' A B 307 9.131 135.663 44.238 1.00 63.89 C
ATOM 7 C4' A B 307 8.237 135.748 45.453 1.00 63.18 C
ATOM 8 O4' A B 307 8.068 137.137 45.832 1.00 63.71 O
ATOM 9 C3' A B 307 6.824 135.249 45.218 1.00 64.26 C
ATOM 10 O3' A B 307 6.736 133.840 45.360 1.00 67.44 O
ATOM 11 C2' A B 307 6.015 136.019 46.248 1.00 63.15 C
ATOM 12 O2' A B 307 6.114 135.459 47.539 1.00 65.35 O
ATOM 13 C1' A B 307 6.726 137.373 46.231 1.00 62.43 C
ATOM 14 N9 A B 307 6.151 138.361 45.311 1.00 61.64 N
ATOM 15 C8 A B 307 6.705 138.810 44.136 1.00 60.81 C
ATOM 16 N7 A B 307 5.993 139.727 43.530 1.00 60.96 N
ATOM 17 C5 A B 307 4.888 139.889 44.352 1.00 60.30 C
ATOM 18 C6 A B 307 3.756 140.724 44.261 1.00 60.13 C
ATOM 19 N6 A B 307 3.545 141.585 43.260 1.00 57.77 N
ATOM 20 N1 A B 307 2.837 140.641 45.246 1.00 59.50 N
ATOM 21 C2 A B 307 3.046 139.775 46.246 1.00 59.80 C
ATOM 22 N3 A B 307 4.066 138.940 46.442 1.00 61.05 N
ATOM 23 C4 A B 307 4.965 139.048 45.449 1.00 60.83 C
ATOM 24 P G B 308 5.696 133.019 44.452 1.00 69.62 P
ATOM 25 OP1 G B 308 5.926 131.568 44.689 1.00 68.63 O
ATOM 26 OP2 G B 308 5.764 133.550 43.063 1.00 69.68 O
ATOM 27 O5' G B 308 4.287 133.428 45.069 1.00 68.33 O
TER
Atoms:
OP1: (5.926,131.568,44.689)
OP2: (5.764,133.550,43.063)
C3': (1.442,133.120,45.550)
C1': (1.276,135.366,46.244)
C5': (3.866,132.920,46.344)
O6: (1.726,139.399,41.826)
O4': (2.461,134.825,46.805)
C8: (2.804,136.117,44.358)
C2: (-0.699,138.732,44.351)
C6: (1.206,138.839,42.800)
C5: (1.698,137.745,43.552)
C4: (0.944,137.268,44.606)
P: (5.696,133.019,44.452)
C4': (2.464,133.383,46.645)
C2': (0.392,134.184,45.834)
O2': (-0.442,133.841,46.923)
N1: (-0.025,139.277,43.282)
N2: (-1.873,139.295,44.664)
N3: (-0.251,137.711,45.058)
N7: (2.868,137.012,43.412)
N9: (1.660,136.214,45.119)
O5': (4.287,133.428,45.069)
O3': (0.931,131.792,45.626)
OP2: (5.764,133.550,43.063)
C3': (1.442,133.120,45.550)
C1': (1.276,135.366,46.244)
C5': (3.866,132.920,46.344)
O6: (1.726,139.399,41.826)
O4': (2.461,134.825,46.805)
C8: (2.804,136.117,44.358)
C2: (-0.699,138.732,44.351)
C6: (1.206,138.839,42.800)
C5: (1.698,137.745,43.552)
C4: (0.944,137.268,44.606)
P: (5.696,133.019,44.452)
C4': (2.464,133.383,46.645)
C2': (0.392,134.184,45.834)
O2': (-0.442,133.841,46.923)
N1: (-0.025,139.277,43.282)
N2: (-1.873,139.295,44.664)
N3: (-0.251,137.711,45.058)
N7: (2.868,137.012,43.412)
N9: (1.660,136.214,45.119)
O5': (4.287,133.428,45.069)
O3': (0.931,131.792,45.626)
OP1: (10.365,135.747,41.589)
OP2: (8.161,136.659,40.704)
C3': (6.824,135.249,45.218)
C1': (6.726,137.373,46.231)
C5': (9.131,135.663,44.238)
O4': (8.068,137.137,45.832)
C8: (6.705,138.810,44.136)
O2': (6.114,135.459,47.539)
C6: (3.756,140.724,44.261)
C5: (4.888,139.889,44.352)
C4: (4.965,139.048,45.449)
P: (9.191,136.626,41.766)
C4': (8.237,135.748,45.453)
C2': (6.015,136.019,46.248)
C2: (3.046,139.775,46.246)
N1: (2.837,140.641,45.246)
N3: (4.066,138.940,46.442)
N6: (3.545,141.585,43.260)
N7: (5.993,139.727,43.530)
N9: (6.151,138.361,45.311)
O5': (8.430,136.169,43.087)
O3': (6.736,133.840,45.360)
OP2: (8.161,136.659,40.704)
C3': (6.824,135.249,45.218)
C1': (6.726,137.373,46.231)
C5': (9.131,135.663,44.238)
O4': (8.068,137.137,45.832)
C8: (6.705,138.810,44.136)
O2': (6.114,135.459,47.539)
C6: (3.756,140.724,44.261)
C5: (4.888,139.889,44.352)
C4: (4.965,139.048,45.449)
P: (9.191,136.626,41.766)
C4': (8.237,135.748,45.453)
C2': (6.015,136.019,46.248)
C2: (3.046,139.775,46.246)
N1: (2.837,140.641,45.246)
N3: (4.066,138.940,46.442)
N6: (3.545,141.585,43.260)
N7: (5.993,139.727,43.530)
N9: (6.151,138.361,45.311)
O5': (8.430,136.169,43.087)
O3': (6.736,133.840,45.360)
Image (generated by PyMOL):