Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01480:01481
Extra
PDB:
ATOM 1 O3' G A1479 106.350 191.699 23.727 1.00101.50 O
ATOM 2 P C A1480 107.798 191.000 23.600 1.00102.60 P
ATOM 3 OP1 C A1480 108.503 191.665 22.475 1.00102.17 O
ATOM 4 OP2 C A1480 107.630 189.523 23.587 1.00101.86 O
ATOM 5 O5' C A1480 108.535 191.402 24.954 1.00103.02 O
ATOM 6 C5' C A1480 108.798 192.783 25.266 1.00104.47 C
ATOM 7 C4' C A1480 109.314 192.919 26.681 1.00105.82 C
ATOM 8 O4' C A1480 108.281 192.519 27.623 1.00106.57 O
ATOM 9 C3' C A1480 110.490 192.034 27.060 1.00106.24 C
ATOM 10 O3' C A1480 111.735 192.518 26.584 1.00107.12 O
ATOM 11 C2' C A1480 110.402 192.037 28.579 1.00106.48 C
ATOM 12 O2' C A1480 110.893 193.227 29.165 1.00105.50 O
ATOM 13 C1' C A1480 108.888 191.949 28.779 1.00107.31 C
ATOM 14 N1 C A1480 108.444 190.544 28.925 1.00108.63 N
ATOM 15 C2 C A1480 108.353 189.996 30.216 1.00109.21 C
ATOM 16 O2 C A1480 108.592 190.717 31.198 1.00110.13 O
ATOM 17 N3 C A1480 108.006 188.696 30.360 1.00109.52 N
ATOM 18 C4 C A1480 107.746 187.951 29.284 1.00109.90 C
ATOM 19 N4 C A1480 107.430 186.669 29.477 1.00110.31 N
ATOM 20 C5 C A1480 107.802 188.487 27.963 1.00109.71 C
ATOM 21 C6 C A1480 108.149 189.775 27.831 1.00109.26 C
ATOM 22 P A A1481 112.909 191.473 26.240 1.00108.40 P
ATOM 23 OP1 A A1481 113.998 192.241 25.585 1.00108.45 O
ATOM 24 OP2 A A1481 112.302 190.313 25.533 1.00107.75 O
ATOM 25 O5' A A1481 113.428 190.979 27.668 1.00108.74 O
TER
ATOM 1 O3' C B1480 111.735 192.518 26.584 1.00107.12 O
ATOM 2 P A B1481 112.909 191.473 26.240 1.00108.40 P
ATOM 3 OP1 A B1481 113.998 192.241 25.585 1.00108.45 O
ATOM 4 OP2 A B1481 112.302 190.313 25.533 1.00107.75 O
ATOM 5 O5' A B1481 113.428 190.979 27.668 1.00108.74 O
ATOM 6 C5' A B1481 114.005 191.909 28.614 1.00110.01 C
ATOM 7 C4' A B1481 114.064 191.297 29.999 1.00111.06 C
ATOM 8 O4' A B1481 112.725 190.914 30.413 1.00111.29 O
ATOM 9 C3' A B1481 114.872 190.017 30.146 1.00111.81 C
ATOM 10 O3' A B1481 116.268 190.271 30.295 1.00113.63 O
ATOM 11 C2' A B1481 114.264 189.399 31.399 1.00111.19 C
ATOM 12 O2' A B1481 114.713 190.003 32.595 1.00110.21 O
ATOM 13 C1' A B1481 112.785 189.737 31.207 1.00111.07 C
ATOM 14 N9 A B1481 112.031 188.677 30.531 1.00111.14 N
ATOM 15 C8 A B1481 111.310 188.765 29.364 1.00111.11 C
ATOM 16 N7 A B1481 110.733 187.643 29.011 1.00110.80 N
ATOM 17 C5 A B1481 111.097 186.753 30.011 1.00111.13 C
ATOM 18 C6 A B1481 110.805 185.395 30.217 1.00111.01 C
ATOM 19 N6 A B1481 110.038 184.671 29.399 1.00110.53 N
ATOM 20 N1 A B1481 111.333 184.799 31.308 1.00110.97 N
ATOM 21 C2 A B1481 112.097 185.528 32.131 1.00110.72 C
ATOM 22 N3 A B1481 112.439 186.810 32.047 1.00111.06 N
ATOM 23 C4 A B1481 111.901 187.373 30.951 1.00111.23 C
ATOM 24 P G B1482 117.340 189.219 29.710 1.00115.03 P
ATOM 25 OP1 G B1482 118.679 189.614 30.223 1.00114.87 O
ATOM 26 OP2 G B1482 117.123 189.093 28.243 1.00114.80 O
ATOM 27 O5' G B1482 116.937 187.828 30.375 1.00115.88 O
TER
ATOM 2 P C A1480 107.798 191.000 23.600 1.00102.60 P
ATOM 3 OP1 C A1480 108.503 191.665 22.475 1.00102.17 O
ATOM 4 OP2 C A1480 107.630 189.523 23.587 1.00101.86 O
ATOM 5 O5' C A1480 108.535 191.402 24.954 1.00103.02 O
ATOM 6 C5' C A1480 108.798 192.783 25.266 1.00104.47 C
ATOM 7 C4' C A1480 109.314 192.919 26.681 1.00105.82 C
ATOM 8 O4' C A1480 108.281 192.519 27.623 1.00106.57 O
ATOM 9 C3' C A1480 110.490 192.034 27.060 1.00106.24 C
ATOM 10 O3' C A1480 111.735 192.518 26.584 1.00107.12 O
ATOM 11 C2' C A1480 110.402 192.037 28.579 1.00106.48 C
ATOM 12 O2' C A1480 110.893 193.227 29.165 1.00105.50 O
ATOM 13 C1' C A1480 108.888 191.949 28.779 1.00107.31 C
ATOM 14 N1 C A1480 108.444 190.544 28.925 1.00108.63 N
ATOM 15 C2 C A1480 108.353 189.996 30.216 1.00109.21 C
ATOM 16 O2 C A1480 108.592 190.717 31.198 1.00110.13 O
ATOM 17 N3 C A1480 108.006 188.696 30.360 1.00109.52 N
ATOM 18 C4 C A1480 107.746 187.951 29.284 1.00109.90 C
ATOM 19 N4 C A1480 107.430 186.669 29.477 1.00110.31 N
ATOM 20 C5 C A1480 107.802 188.487 27.963 1.00109.71 C
ATOM 21 C6 C A1480 108.149 189.775 27.831 1.00109.26 C
ATOM 22 P A A1481 112.909 191.473 26.240 1.00108.40 P
ATOM 23 OP1 A A1481 113.998 192.241 25.585 1.00108.45 O
ATOM 24 OP2 A A1481 112.302 190.313 25.533 1.00107.75 O
ATOM 25 O5' A A1481 113.428 190.979 27.668 1.00108.74 O
TER
ATOM 1 O3' C B1480 111.735 192.518 26.584 1.00107.12 O
ATOM 2 P A B1481 112.909 191.473 26.240 1.00108.40 P
ATOM 3 OP1 A B1481 113.998 192.241 25.585 1.00108.45 O
ATOM 4 OP2 A B1481 112.302 190.313 25.533 1.00107.75 O
ATOM 5 O5' A B1481 113.428 190.979 27.668 1.00108.74 O
ATOM 6 C5' A B1481 114.005 191.909 28.614 1.00110.01 C
ATOM 7 C4' A B1481 114.064 191.297 29.999 1.00111.06 C
ATOM 8 O4' A B1481 112.725 190.914 30.413 1.00111.29 O
ATOM 9 C3' A B1481 114.872 190.017 30.146 1.00111.81 C
ATOM 10 O3' A B1481 116.268 190.271 30.295 1.00113.63 O
ATOM 11 C2' A B1481 114.264 189.399 31.399 1.00111.19 C
ATOM 12 O2' A B1481 114.713 190.003 32.595 1.00110.21 O
ATOM 13 C1' A B1481 112.785 189.737 31.207 1.00111.07 C
ATOM 14 N9 A B1481 112.031 188.677 30.531 1.00111.14 N
ATOM 15 C8 A B1481 111.310 188.765 29.364 1.00111.11 C
ATOM 16 N7 A B1481 110.733 187.643 29.011 1.00110.80 N
ATOM 17 C5 A B1481 111.097 186.753 30.011 1.00111.13 C
ATOM 18 C6 A B1481 110.805 185.395 30.217 1.00111.01 C
ATOM 19 N6 A B1481 110.038 184.671 29.399 1.00110.53 N
ATOM 20 N1 A B1481 111.333 184.799 31.308 1.00110.97 N
ATOM 21 C2 A B1481 112.097 185.528 32.131 1.00110.72 C
ATOM 22 N3 A B1481 112.439 186.810 32.047 1.00111.06 N
ATOM 23 C4 A B1481 111.901 187.373 30.951 1.00111.23 C
ATOM 24 P G B1482 117.340 189.219 29.710 1.00115.03 P
ATOM 25 OP1 G B1482 118.679 189.614 30.223 1.00114.87 O
ATOM 26 OP2 G B1482 117.123 189.093 28.243 1.00114.80 O
ATOM 27 O5' G B1482 116.937 187.828 30.375 1.00115.88 O
TER
Atoms:
C2: (108.353,189.996,30.216)
OP1: (108.503,191.665,22.475)
OP2: (107.630,189.523,23.587)
C4: (107.746,187.951,29.284)
O5': (108.535,191.402,24.954)
C3': (110.490,192.034,27.060)
C1': (108.888,191.949,28.779)
O4': (108.281,192.519,27.623)
C5': (108.798,192.783,25.266)
P: (107.798,191.000,23.600)
O2: (108.592,190.717,31.198)
C4': (109.314,192.919,26.681)
C2': (110.402,192.037,28.579)
O2': (110.893,193.227,29.165)
N1: (108.444,190.544,28.925)
N3: (108.006,188.696,30.360)
N4: (107.430,186.669,29.477)
C6: (108.149,189.775,27.831)
C5: (107.802,188.487,27.963)
O3': (111.735,192.518,26.584)
OP1: (108.503,191.665,22.475)
OP2: (107.630,189.523,23.587)
C4: (107.746,187.951,29.284)
O5': (108.535,191.402,24.954)
C3': (110.490,192.034,27.060)
C1': (108.888,191.949,28.779)
O4': (108.281,192.519,27.623)
C5': (108.798,192.783,25.266)
P: (107.798,191.000,23.600)
O2: (108.592,190.717,31.198)
C4': (109.314,192.919,26.681)
C2': (110.402,192.037,28.579)
O2': (110.893,193.227,29.165)
N1: (108.444,190.544,28.925)
N3: (108.006,188.696,30.360)
N4: (107.430,186.669,29.477)
C6: (108.149,189.775,27.831)
C5: (107.802,188.487,27.963)
O3': (111.735,192.518,26.584)
OP1: (113.998,192.241,25.585)
OP2: (112.302,190.313,25.533)
C3': (114.872,190.017,30.146)
C1': (112.785,189.737,31.207)
C5': (114.005,191.909,28.614)
O4': (112.725,190.914,30.413)
C8: (111.310,188.765,29.364)
O2': (114.713,190.003,32.595)
C6: (110.805,185.395,30.217)
C5: (111.097,186.753,30.011)
C4: (111.901,187.373,30.951)
P: (112.909,191.473,26.240)
C4': (114.064,191.297,29.999)
C2': (114.264,189.399,31.399)
C2: (112.097,185.528,32.131)
N1: (111.333,184.799,31.308)
N3: (112.439,186.810,32.047)
N6: (110.038,184.671,29.399)
N7: (110.733,187.643,29.011)
N9: (112.031,188.677,30.531)
O5': (113.428,190.979,27.668)
O3': (116.268,190.271,30.295)
OP2: (112.302,190.313,25.533)
C3': (114.872,190.017,30.146)
C1': (112.785,189.737,31.207)
C5': (114.005,191.909,28.614)
O4': (112.725,190.914,30.413)
C8: (111.310,188.765,29.364)
O2': (114.713,190.003,32.595)
C6: (110.805,185.395,30.217)
C5: (111.097,186.753,30.011)
C4: (111.901,187.373,30.951)
P: (112.909,191.473,26.240)
C4': (114.064,191.297,29.999)
C2': (114.264,189.399,31.399)
C2: (112.097,185.528,32.131)
N1: (111.333,184.799,31.308)
N3: (112.439,186.810,32.047)
N6: (110.038,184.671,29.399)
N7: (110.733,187.643,29.011)
N9: (112.031,188.677,30.531)
O5': (113.428,190.979,27.668)
O3': (116.268,190.271,30.295)
Image (generated by PyMOL):